Gvermi6734.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6734.t1
Unique NameGvermi6734.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length192
Homology
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A2V3J4V8_9FLOR (50S ribosomal protein L21 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4V8_9FLOR)

HSP 1 Score: 316 bits (809), Expect = 1.590e-106
Identity = 151/191 (79.06%), Postives = 173/191 (90.58%), Query Frame = 0
Query:    1 MERVPLPPGLSNDKFGLYEVLESSQHLRQVQGRNAVVAIHGPTEAWIPKGIEQHGASGGMWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDIVYEWPDAEMIKPYKVPFYPNRPPLPNHMRPL 191
            +ERVPLPPGL +DKFGLYEVL++S+ +R+ +G NAVVAIHGP E W+P+GIE+HGASGG+WA+I TSGTQYKVMKGDVLYTNRQ GEVNTQVAFD VLAIG FDWTLFGRP IR AKVLATVEEQTKSAKVMVAKFKKRKGY RRKGHRQPITRFRID+IVY+WP A+MIKP++V + P  PP+P+H+RPL
Sbjct:  101 IERVPLPPGLKSDKFGLYEVLDTSKDMRETKGENAVVAIHGPPEIWLPRGIEEHGASGGLWAVIGTSGTQYKVMKGDVLYTNRQAGEVNTQVAFDWVLAIGAFDWTLFGRPLIRGAKVLATVEEQTKSAKVMVAKFKKRKGYLRRKGHRQPITRFRIDEIVYQWPAADMIKPHEVKYDPEGPPMPHHIRPL 291          
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A7J7IDF1_9RHOD (Ribosomal protein l21 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDF1_9RHOD)

HSP 1 Score: 105 bits (263), Expect = 6.650e-25
Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = 0
Query:   55 GASGGMWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDIVYEWPDAEMIKP 172
            G   G +A+IA    QYKV  GD++Y +R  GEV+ +V F  VLA+G  DW++ GRP +  A+ +AT+EEQ+ S K+ + K K+RKGY R  GHRQP TR  I +I ++ P+   ++P
Sbjct:  101 GRGSGWFAVIARGPKQYKVTVGDIVYLDRLEGEVSHEVRFPEVLALGSVDWSVIGRPYVPGAEAVATIEEQSLSQKIYIYKKKRRKGYERLLGHRQPYTRVHITEIRWQVPEDNELEP 218          
BLAST of Gvermi6734.t1 vs. uniprot
Match: U2E7I3_9FIRM (50S ribosomal protein L21 n=2 Tax=Eubacteriales TaxID=186802 RepID=U2E7I3_9FIRM)

HSP 1 Score: 95.9 bits (237), Expect = 2.110e-22
Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDI 160
            M+A+IAT G QYKV +GDV+Y  +  GEV+  V    VLA+G  D  + G+P +  A V+A V  Q K+ K++V K+K++K YRR++GHRQP T+ +I+ I
Sbjct:    1 MYAVIATGGKQYKVQEGDVIYVEKLAGEVDATVELTNVLAVGKEDGLVVGKPVVEGANVVAKVLGQGKAKKIIVFKYKRKKDYRRKQGHRQPYTKLQIEKI 101          
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A1R2B5Z7_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B5Z7_9CILI)

HSP 1 Score: 98.2 bits (243), Expect = 4.720e-22
Identity = 48/107 (44.86%), Postives = 73/107 (68.22%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDIVYEWPD 166
            ++A++  SG QYKV K D++ + +   ++  QV FD V+ +G   +TL GRP + +A+V AT+E+QT S K++V K K+RKGY++ KGHRQ IT  R+D I +E  D
Sbjct:   98 IFAVLKISGFQYKVTKDDLVMSEKLPYDIGQQVVFDTVMLLGTPQYTLIGRPIVNNARVYATIEQQTLSDKIIVFKKKRRKGYKKNKGHRQEITFLRVDKIEHEIKD 204          
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A7W0HJA4_9DELT (50S ribosomal protein L21 n=1 Tax=Desulfosalsimonas propionicica TaxID=332175 RepID=A0A7W0HJA4_9DELT)

HSP 1 Score: 94.0 bits (232), Expect = 1.250e-21
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDIV 161
            M+A++AT G QYKV KGDVL   +  G+V   V FD +L +   D    G+P + +A V A + EQ +S K++V K+K+RK YR +KGHRQ  T  +IDDI 
Sbjct:    1 MYAVVATGGKQYKVTKGDVLRIEKIAGDVGDSVTFDKILMLSDGDAVSLGQPVLENASVQARIVEQARSKKILVFKYKRRKRYRLKKGHRQSYTAVQIDDIA 102          
BLAST of Gvermi6734.t1 vs. uniprot
Match: RL21_CLOAB (50S ribosomal protein L21 n=4 Tax=Clostridium TaxID=1485 RepID=RL21_CLOAB)

HSP 1 Score: 93.2 bits (230), Expect = 2.360e-21
Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDI 160
            M+A+IAT G QYKV +GD +Y  +   EV++ +  + VLA+   D  + G+P +  AKV+A VE Q KS K++V K+K++K YRR++GHRQ  T+  I+ I
Sbjct:    1 MYAVIATGGKQYKVQEGDAIYVEKIAAEVDSTIELNEVLAVSKEDGLVLGKPVVEGAKVVAKVEAQGKSKKIIVFKYKRKKDYRRKRGHRQAYTKLVIEKI 101          
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A084JI46_9CLOT (50S ribosomal protein L21 n=11 Tax=root TaxID=1 RepID=A0A084JI46_9CLOT)

HSP 1 Score: 93.2 bits (230), Expect = 2.360e-21
Identity = 46/101 (45.54%), Postives = 69/101 (68.32%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDI 160
            M+A++ T G QY+V +GDVL+  +   EV++ V FD VLA+G  D  + G+P +  AKV+A V  Q K+ KV+V K+K +K YR+++GHRQP T+  I+ I
Sbjct:    1 MYAVLLTGGKQYRVQEGDVLFVEKLEAEVDSTVEFDKVLAVGKEDGLVVGKPVVEGAKVVAKVVAQGKAKKVIVFKYKPKKDYRKKQGHRQPFTKVVIEKI 101          
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A1M6JJE9_9CLOT (50S ribosomal protein L21 n=1 Tax=Hathewaya proteolytica DSM 3090 TaxID=1121331 RepID=A0A1M6JJE9_9CLOT)

HSP 1 Score: 92.0 bits (227), Expect = 6.650e-21
Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDI 160
            M+AIIAT G QYKV +GDV++  +   EV T V  + VLA+G  D  + G+P +  AKV+A V EQ K+ KV+V K+K +K +R++ GHRQ  T+ +I+ I
Sbjct:    1 MYAIIATGGKQYKVQEGDVIFVEKLNAEVETSVELNEVLAVGKEDGLVLGKPVVEGAKVVAKVLEQGKAKKVIVFKYKPKKDFRKKNGHRQMYTKLQIEKI 101          
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A017RUX1_9CLOT (50S ribosomal protein L21 n=1 Tax=Fervidicella metallireducens AeB TaxID=1403537 RepID=A0A017RUX1_9CLOT)

HSP 1 Score: 92.0 bits (227), Expect = 6.650e-21
Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDI 160
            M+AIIAT G QYKV +GD+L+  +   EV+++V  + VLA+        G P +  AKV+A V +  K+ K++V KFKK+K YRR++GHRQP T+ +I+ I
Sbjct:    1 MYAIIATGGKQYKVQEGDILFVEKLAAEVDSEVELNDVLAVSKDGKLTIGSPVVEGAKVVARVVKHGKAKKIIVFKFKKKKDYRRKQGHRQPYTQIKIEKI 101          
BLAST of Gvermi6734.t1 vs. uniprot
Match: A0A3A4T663_9DELT (50S ribosomal protein L21 n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4T663_9DELT)

HSP 1 Score: 92.0 bits (227), Expect = 6.840e-21
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query:   60 MWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAIGVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQPITRFRIDDIV 161
            M+A++A  G QYKV +GDVL   +  G+V   V FD VL +   +    G+P + +  V A + EQ K+ K++V KFK+RKGYR+ +GHRQP T  +ID IV
Sbjct:    1 MYAVVAAGGKQYKVEEGDVLRIEKVDGDVGDTVTFDKVLLVADGEQLTIGQPLVENTSVSAKIVEQGKNKKIIVFKFKRRKGYRKTQGHRQPFTAVKIDSIV 102          
The following BLAST results are available for this feature:
BLAST of Gvermi6734.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4V8_9FLOR1.590e-10679.0650S ribosomal protein L21 n=1 Tax=Gracilariopsis c... [more]
A0A7J7IDF1_9RHOD6.650e-2544.92Ribosomal protein l21 n=1 Tax=Cyanidiococcus yangm... [more]
U2E7I3_9FIRM2.110e-2246.5350S ribosomal protein L21 n=2 Tax=Eubacteriales Ta... [more]
A0A1R2B5Z7_9CILI4.720e-2244.86Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]
A0A7W0HJA4_9DELT1.250e-2146.0850S ribosomal protein L21 n=1 Tax=Desulfosalsimona... [more]
RL21_CLOAB2.360e-2144.5550S ribosomal protein L21 n=4 Tax=Clostridium TaxI... [more]
A0A084JI46_9CLOT2.360e-2145.5450S ribosomal protein L21 n=11 Tax=root TaxID=1 Re... [more]
A0A1M6JJE9_9CLOT6.650e-2146.5350S ribosomal protein L21 n=1 Tax=Hathewaya proteo... [more]
A0A017RUX1_9CLOT6.650e-2145.5450S ribosomal protein L21 n=1 Tax=Fervidicella met... [more]
A0A3A4T663_9DELT6.840e-2145.1050S ribosomal protein L21 n=1 Tax=Desulfobacterace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028909Ribosomal protein L21-likePFAMPF00829Ribosomal_L21pcoord: 60..160
e-value: 6.4E-31
score: 106.6
IPR028909Ribosomal protein L21-likePANTHERPTHR2134950S RIBOSOMAL PROTEIN L21coord: 55..162
IPR001787Ribosomal protein L21TIGRFAMTIGR00061TIGR00061coord: 61..161
e-value: 1.0E-22
score: 78.4
IPR001787Ribosomal protein L21HAMAPMF_01363Ribosomal_L21coord: 60..162
score: 21.380821
IPR018258Ribosomal protein L21, conserved sitePROSITEPS01169RIBOSOMAL_L21coord: 131..153
IPR036164L21-like superfamilySUPERFAMILY141091L21p-likecoord: 60..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2116480..2117055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6734.t1Gvermi6734.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2116480..2117055 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6734.t1 ID=Gvermi6734.t1|Name=Gvermi6734.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=192bp
MERVPLPPGLSNDKFGLYEVLESSQHLRQVQGRNAVVAIHGPTEAWIPKG
IEQHGASGGMWAIIATSGTQYKVMKGDVLYTNRQVGEVNTQVAFDAVLAI
GVFDWTLFGRPAIRHAKVLATVEEQTKSAKVMVAKFKKRKGYRRRKGHRQ
PITRFRIDDIVYEWPDAEMIKPYKVPFYPNRPPLPNHMRPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028909L21p-like
IPR001787Ribosomal_L21
IPR018258Ribosomal_L21_CS
IPR036164L21-like_sf