Gvermi6758.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6758.t1
Unique NameGvermi6758.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length173
Homology
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BLAST of Gvermi6758.t1 vs. uniprot
Match: A0A2V3J438_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J438_9FLOR)

HSP 1 Score: 133 bits (335), Expect = 3.930e-35
Identity = 76/172 (44.19%), Postives = 113/172 (65.70%), Query Frame = 0 
Query:    1 MALWVLLAVINERVVRPWWVANADSFLAPLRASSVAAQAHDLALTRRASVLDGIMQQMVAVSKRKILASRTLDTKSSRLQQAKQKVADLKADIKLEKGKLDDAGTSADKQRCLETVQQLTEQLLETVTRVDDLRNDVRVLKEEVSHCERQMEPLQHKWEQSLHIENHTQFYR 172
            +ALWV + V+NER++RPWW + +   L   RA SV+++AH+LA+ +RAS LD IM+QMVA+SKRK+LA R + TK+ +LQ+ K  + + K  +   + K  DA    D  + L  V  LT+ +  T  +   L  D++ LK +V   + Q++PLQ +WEQSL+IENHT+FYR
Sbjct:  132 LALWVAIGVLNERLIRPWWQSTSPRLLGGWRAHSVSSRAHNLAVNQRASALDHIMEQMVAISKRKLLAQRAIQTKTEQLQKTKSSLDNSKQMLTSAQQKAKDAHN--DDNQLL--VMSLTQMVDNTQVQCQVLEQDIQRLKVDVHTSQTQLQPLQQRWEQSLNIENHTRFYR 299
The following BLAST results are available for this feature:
BLAST of Gvermi6758.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J438_9FLOR3.930e-3544.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..150
NoneNo IPR availableCOILSCoilCoilcoord: 72..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2168585..2169103 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6758.t1Gvermi6758.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2168585..2169103 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6758.t1 ID=Gvermi6758.t1|Name=Gvermi6758.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=173bp
MALWVLLAVINERVVRPWWVANADSFLAPLRASSVAAQAHDLALTRRASV
LDGIMQQMVAVSKRKILASRTLDTKSSRLQQAKQKVADLKADIKLEKGKL
DDAGTSADKQRCLETVQQLTEQLLETVTRVDDLRNDVRVLKEEVSHCERQ
MEPLQHKWEQSLHIENHTQFYR*
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