Gvermi6776.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6776.t1
Unique NameGvermi6776.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length202
Homology
BLAST of Gvermi6776.t1 vs. uniprot
Match: A0A2V3J409_9FLOR (Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J409_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 2.120e-68
Identity = 99/123 (80.49%), Postives = 110/123 (89.43%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHAKP 123
            LD+LDAEICGA  TPY  GVFRLEL IPREYPFKPPRVRF+TKIYHPN+D++GRICLDSLNMPP G WKPSLN+ATVLT+IQALMSTPNA DGLMADITDEYRT PA F+RKA +WT ++A P
Sbjct:   37 LDLLDAEICGAADTPYHSGVFRLELHIPREYPFKPPRVRFLTKIYHPNIDTEGRICLDSLNMPPNGAWKPSLNIATVLTTIQALMSTPNADDGLMADITDEYRTTPAVFRRKAEEWTNMYANP 159          
BLAST of Gvermi6776.t1 vs. uniprot
Match: R7Q2H8_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2H8_CHOCR)

HSP 1 Score: 189 bits (480), Expect = 2.590e-57
Identity = 87/121 (71.90%), Postives = 101/121 (83.47%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHA 121
            LDVLDAEI GA  TPY+GG+FRLE+ IP EYP KPPRVRF+TKIYHPN+DS GRICLDSLNMPPKG WKPSLNV+T+LT+IQALMS PN  DGLM +IT+E+R  P  F+ KA + TR +A
Sbjct:   37 LDVLDAEIRGASDTPYEGGIFRLEVVIPAEYPLKPPRVRFMTKIYHPNIDSQGRICLDSLNMPPKGAWKPSLNVSTLLTTIQALMSEPNGDDGLMVEITEEFRRRPEVFRNKARECTRKYA 157          
BLAST of Gvermi6776.t1 vs. uniprot
Match: UPI00077A9391 (ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A9391)

HSP 1 Score: 170 bits (430), Expect = 3.350e-50
Identity = 74/121 (61.16%), Postives = 98/121 (80.99%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHA 121
            +D L+AEI G+ GTPY+GG FRLE+ +P  YPF PP+VRFVTKIYHPN+D +GRICLD+L MPPKG WKP+LN++TVLTSIQ LMS PN  D L+ +I++E++ N  +F +KA +WT+ +A
Sbjct:   25 IDKLEAEIQGSDGTPYNGGSFRLEINVPERYPFYPPKVRFVTKIYHPNIDGNGRICLDTLQMPPKGAWKPALNISTVLTSIQLLMSEPNPDDPLVPEISEEFKYNKPQFVQKAKEWTQQYA 145          
BLAST of Gvermi6776.t1 vs. uniprot
Match: UPI0010FCCE5D (ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FCCE5D)

HSP 1 Score: 170 bits (430), Expect = 6.720e-50
Identity = 74/121 (61.16%), Postives = 98/121 (80.99%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHA 121
            +D L+AEI G+ GTPY+GG FRLE+ +P  YPF PP+VRFVTKIYHPN+D +GRICLD+L MPPKG WKP+LN++TVLTSIQ LMS PN  D L+ +I++E++ N  +F +KA +WT+ +A
Sbjct:   31 IDKLEAEIQGSDGTPYNGGSFRLEINVPERYPFYPPKVRFVTKIYHPNIDGNGRICLDTLQMPPKGAWKPALNISTVLTSIQLLMSEPNPDDPLVPEISEEFKYNKPQFVQKAKEWTQQYA 151          
BLAST of Gvermi6776.t1 vs. uniprot
Match: A0A7S0JCU1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JCU1_9EUKA)

HSP 1 Score: 170 bits (430), Expect = 9.330e-50
Identity = 82/128 (64.06%), Postives = 97/128 (75.78%), Query Frame = 0
Query:    4 LDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHA-----KPPPA 126
            +DA + GA+GTPY  G FRL L +P  YPF+PP+V FVT IYHPN+DS GRICLD LNMPPKG WKPSLN++TVL+SIQ LMS PNA DGLM DIT++Y  N A+FQR A + T+ HA      PPPA
Sbjct:   37 IDAVVQGAQGTPYADGCFRLRLVMPPRYPFEPPKVHFVTPIYHPNIDSAGRICLDILNMPPKGAWKPSLNISTVLSSIQLLMSHPNADDGLMLDITNQYIHNFAQFQRDAVEHTKRHAGAEKPAPPPA 164          
BLAST of Gvermi6776.t1 vs. uniprot
Match: UPI001EAFF559 (ubiquitin-conjugating enzyme E2 T-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EAFF559)

HSP 1 Score: 169 bits (428), Expect = 9.390e-50
Identity = 72/121 (59.50%), Postives = 95/121 (78.51%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHA 121
            +D L+A+I G  GTPY+GG+F+LE+ IP  YPF+PP+VR+VT IYHPN+D+ GRICLD+L MPPKG WKP LNV TVLTS+Q LM+ PN +D LM DI++E++ N A +  +A +WT  HA
Sbjct:   31 IDHLEAQIVGGEGTPYEGGIFKLEIQIPERYPFEPPKVRYVTPIYHPNIDNGGRICLDTLKMPPKGAWKPCLNVGTVLTSLQLLMAEPNPEDPLMTDISNEFKYNRALYNARAKEWTEKHA 151          
BLAST of Gvermi6776.t1 vs. uniprot
Match: A0A2K6S7G1_SAIBB (Ubiquitin conjugating enzyme E2 T n=2 Tax=Platyrrhini TaxID=9479 RepID=A0A2K6S7G1_SAIBB)

HSP 1 Score: 168 bits (426), Expect = 1.430e-49
Identity = 75/122 (61.48%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHAK 122
            +DVL A+I G   TPY+ GVF+LE+ IP  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ATVLTSIQ LMS PN  D LMADI+ E++ N   F + A QWT  HA+
Sbjct:   31 MDVLRAQILGGANTPYEKGVFKLEVTIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPVFLKNARQWTEKHAR 152          
BLAST of Gvermi6776.t1 vs. uniprot
Match: UPI001E69D659 (ubiquitin-conjugating enzyme E2 T isoform X1 n=2 Tax=Meles meles TaxID=9662 RepID=UPI001E69D659)

HSP 1 Score: 169 bits (427), Expect = 1.910e-49
Identity = 76/122 (62.30%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHAK 122
            +D L A+I GA  TPY+ GVF+LE+ IP  YPF+PP++RF+T IYHPN+DS GRICLD L +PPKG W+PSLN+ATVLTSIQ LMS PN  D LMADI+ E++ N   F + A QWT  HAK
Sbjct:   31 MDDLQAQILGAADTPYEKGVFKLEVTIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPVFLKNARQWTEKHAK 152          
BLAST of Gvermi6776.t1 vs. uniprot
Match: A0A669B145_ORENI (UBC core domain-containing protein n=10 Tax=Cichlidae TaxID=8113 RepID=A0A669B145_ORENI)

HSP 1 Score: 167 bits (423), Expect = 3.830e-49
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHA 121
            +D L A+I G  GTPYDGGVF LE+ IP  YPF+PP++RF+T IYHPN+D+ GRIC D+L +PPKG WKPSLN++TVLTSIQ LM+ PN  D LMADI+ E++ N   F  KA +WT+ HA
Sbjct:   31 IDDLRAQILGGSGTPYDGGVFSLEVKIPERYPFEPPKIRFLTPIYHPNIDNSGRICHDALKLPPKGAWKPSLNISTVLTSIQLLMAEPNPDDPLMADISSEFKYNKHLFMEKARKWTQEHA 151          
BLAST of Gvermi6776.t1 vs. uniprot
Match: UPI001C03CB54 (ubiquitin-conjugating enzyme E2 T n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C03CB54)

HSP 1 Score: 167 bits (423), Expect = 3.830e-49
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVDSDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITDEYRTNPAEFQRKAAQWTRLHA 121
            +D L A+I G  GTPY+GG+F LE+ IP  YPF+PP++RF+T IYHPN+D+ GRIC D+L +PPKG WKPSLN++TVLTSIQ LMS PN  D LMADI+ E++ N   F  KA +WTR HA
Sbjct:   31 IDELRAQIVGGTGTPYEGGLFSLEVNIPERYPFEPPKIRFLTPIYHPNIDNSGRICHDALKLPPKGAWKPSLNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNKHLFMEKARKWTREHA 151          
The following BLAST results are available for this feature:
BLAST of Gvermi6776.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J409_9FLOR2.120e-6880.49Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilar... [more]
R7Q2H8_CHOCR2.590e-5771.90UBC core domain-containing protein n=1 Tax=Chondru... [more]
UPI00077A93913.350e-5061.16ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Acr... [more]
UPI0010FCCE5D6.720e-5061.16ubiquitin-conjugating enzyme E2 T-like n=1 Tax=Acr... [more]
A0A7S0JCU1_9EUKA9.330e-5064.06Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
UPI001EAFF5599.390e-5059.50ubiquitin-conjugating enzyme E2 T-like n=2 Tax=Hal... [more]
A0A2K6S7G1_SAIBB1.430e-4961.48Ubiquitin conjugating enzyme E2 T n=2 Tax=Platyrrh... [more]
UPI001E69D6591.910e-4962.30ubiquitin-conjugating enzyme E2 T isoform X1 n=2 T... [more]
A0A669B145_ORENI3.830e-4961.16UBC core domain-containing protein n=10 Tax=Cichli... [more]
UPI001C03CB543.830e-4961.16ubiquitin-conjugating enzyme E2 T n=1 Tax=Melanota... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 1..122
e-value: 3.6E-35
score: 132.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..201
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 1..128
NoneNo IPR availablePANTHERPTHR24068:SF278UBIQUITIN-CONJUGATING ENZYME E2 Tcoord: 1..128
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 3..116
e-value: 9.0E-38
score: 129.1
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..122
score: 41.475918
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 1..117
e-value: 6.76009E-49
score: 154.282
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..122
e-value: 1.8E-46
score: 159.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 3..125
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 45..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2257260..2257865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6776.t1Gvermi6776.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2257260..2257865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6776.t1 ID=Gvermi6776.t1|Name=Gvermi6776.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=202bp
LDVLDAEICGARGTPYDGGVFRLELAIPREYPFKPPRVRFVTKIYHPNVD
SDGRICLDSLNMPPKGVWKPSLNVATVLTSIQALMSTPNAQDGLMADITD
EYRTNPAEFQRKAAQWTRLHAKPPPAARPSAPHPPSAPHTPSAPLSPSAP
LSPSAPLSPSAPLSPSAPHSPSAAPPRSPPERRAPTPPPPDQPRPKRPRT
H*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS