Gvermi6648.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6648.t1
Unique NameGvermi6648.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length521
Homology
BLAST of Gvermi6648.t1 vs. uniprot
Match: A0A2V3IDU4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDU4_9FLOR)

HSP 1 Score: 538 bits (1386), Expect = 1.410e-185
Identity = 334/504 (66.27%), Postives = 391/504 (77.58%), Query Frame = 0
Query:   19 MPVPKTESRQSRLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNAATGTPPPFPRTKQHRAINSFPYANGQDHVPAPRGPHTFSTTSSGVPFAVPPKLAATAMGPYASGKSDSNGGVKRTVSGSVIFHPIQTKTAPSHQANNQVRPTLSHAAKKGVPTNSMTKPVSDGGESRSSNGT-ENGHTNGKFWKTVIGGEKGRAILRAAESMQKMRYGVLASKSAEECHGEKSLKNGMAT-PVATSTTEENVADTVRNPSPPKKRKSEPCPSDDGGETGETTLHINGHSIPESDVQLLLSSAADISAREEERKRSSGSSSDHISVPREERKERNISPRQTVSRSRPPSSSGKPVSSRNRKEGSERAVSRSSTARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPAIGSGKSGARNGQRNSDSKSGRSDENGEDLIDDSEKHFRCSVCAQAFDRVALLNRHVANKHPLRSD 520
            MPVP+TE+RQ+RLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNA   TPPPFPR+KQHRA+ ++PY +G DH+  P    T+ST S+G+ FA+PPK   +++ PY +GK +SNGGVKRTVSGSV+FHPIQ KT    Q       +  H   K   + S  K V +    + + G    G  NGKFWKTVIGG+KGRAIL+AAESMQ+MR+G++ S++ ++    K++K    T P  TS   E   DT R+ SP KKRKS+    D+  E GETTLHINGHSIPES VQLLLSSAADISAREEERKRSSGSS++H  +  EE++ ++   R    + +P  +  K VSSRNRK+GSER+ SRSS ARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPAIGSGKSG+RNG RNSDS+   SD+N ED IDDS+KHFRCSVCAQAFDRVALLNRHVANKHPL+S+
Sbjct:    1 MPVPRTENRQARLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNAGAATPPPFPRSKQHRAMPAYPYGHGPDHMQIP-ATETYST-STGIAFAIPPKTVTSSVSPYRNGKGESNGGVKRTVSGSVVFHPIQPKTVAPRQGTTPPPTSSVHTENKEGESVSAQKAVGEKMNGQHATGVGSGGSANGKFWKTVIGGDKGRAILKAAESMQRMRHGMVGSRAMDD--SGKTMKGVTQTQPPTTSVKGEAGVDTKRHLSPAKKRKSDNS-KDNEEEAGETTLHINGHSIPESHVQLLLSSAADISAREEERKRSSGSSTEHTGIHMEEKRSKSPPSRAIAPKLKPAVTHTKQVSSRNRKDGSERSTSRSSAARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPAIGSGKSGSRNGNRNSDSRV-HSDDNDEDEIDDSKKHFRCSVCAQAFDRVALLNRHVANKHPLKSE 498          
BLAST of Gvermi6648.t1 vs. uniprot
Match: R7Q0F2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0F2_CHOCR)

HSP 1 Score: 317 bits (812), Expect = 7.550e-99
Identity = 256/523 (48.95%), Postives = 323/523 (61.76%), Query Frame = 0
Query:   14 TATTTMPVPKTESRQSRLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVMPRVIIAQNNAATGTPPP-FPRTKQHRAINSFPYANG--QDHVPAPRGPHTFSTTSSGVPFAVPPKLAATAMGPYASGKSDSNGGVKRTVSGSVIFHPIQTKTAPSHQANNQVRPTLSHAAKKGVPTNSMTK-PVSDGGESRSSNGTENGHTNGKFWKTVIGGEKGRAILRAAESMQKMRYGVLASKSAEECHGEKSLKNGMATPVATSTTE---ENVADTVRNPSPP---KKRKSEPCPSDDGGETGETTLHINGHSIPESDVQLLLSSAADISAREEERKRSSGSSSDHISVPREERKERNISPRQTV-----SRSRPPSSSGKPVSSRNRKEGSERAVSRSSTARPFKCTRCPSSFDRDGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPAIGSGKS--GARNGQRNSDSKSGRSDENGEDLIDDSEKHFRCSVCAQAFDRVALLNRHVANKHPLRS 519
            TA+ ++   + ESRQ+RLDAAIALFRSEASASGYVVEEVRLRLPVPDVDV+PRV+IAQ           FPRTKQHR + S+P      +++ P       F   +    + +P +      G    G   +N G KRTVSGSVIFHP+  K  PS Q    +    ++ A+K  P +S+   P  DG      +  ++ H    +WKTVIGGE+G+ IL+AAESMQ++R+     K  EE   EK        PVA   +E   E  AD            +  ++P         GE T HINGH IPESDVQLLLSSA DISAR+++      +++  I   RE  ++R   P +T+      + R  S+S       +R+  S+R  S SSTARP+KCT+CPSSFDR+GHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPA+GSGK+   +RN   +SDS + +S+   +D  DDSEKHFRCS C  AF+RVALLNRHVA KHPL++
Sbjct:    6 TASPSVAAVRMESRQARLDAAIALFRSEASASGYVVEEVRLRLPVPDVDVLPRVVIAQXXXXXXXXXXXFPRTKQHRPLYSYPRRTSFQREYPPVQEQNRPFVNPTKRS-YGIPGRANTDHNGKIRQG--GANTGFKRTVSGSVIFHPVPAKANPSPQHGTAITQNATNPAQKKGPLSSIPYLPTKDGKTLLQPSDQQDRH----YWKTVIGGERGKQILQAAESMQRLRH-AKTGKIYEEA--EK--------PVAMDISECPEERKADVAMKQERAVVATRGSAQPRTEIYKTTRGEGTHHINGHDIPESDVQLLLSSAVDISARKKQ-----AATNIIIKSERESIRDRKSKPSKTILAEVGKQKRVKSTSVSNGKHGSRRSNSDRRASGSSTARPYKCTKCPSSFDREGHLRVHILAVHEKKXXXXXXXXXXXXXXXXXXXXXXXXXXQASPAVGSGKTCMSSRNNLYSSDSATTKSEIICDDAQDDSEKHFRCSACRMAFNRVALLNRHVAEKHPLQT 505          
The following BLAST results are available for this feature:
BLAST of Gvermi6648.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IDU4_9FLOR1.410e-18566.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q0F2_CHOCR7.550e-9948.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 427..450
e-value: 9.3E-4
score: 28.5
coord: 398..421
e-value: 0.1
score: 21.7
coord: 492..515
e-value: 0.03
score: 23.5
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 427..450
e-value: 3.7E-4
score: 20.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 400..421
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 429..450
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 494..515
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 398..426
score: 12.112707
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 492..515
score: 9.244638
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 427..455
score: 11.322948
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 422..451
e-value: 4.5E-9
score: 37.9
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 396..421
e-value: 1.1E-6
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..322
NoneNo IPR availablePANTHERPTHR19818:SF135ZINC FINGER PROTEIN 76coord: 395..513
coord: 300..448
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 395..513
NoneNo IPR availablePANTHERPTHR19818ZINC FINGER PROTEIN ZIC AND GLIcoord: 300..448
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 396..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1815995..1817557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6648.t1Gvermi6648.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1815995..1817557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6648.t1 ID=Gvermi6648.t1|Name=Gvermi6648.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=521bp
MPTASTGMAQQVATATTTMPVPKTESRQSRLDAAIALFRSEASASGYVVE
EVRLRLPVPDVDVMPRVIIAQNNAATGTPPPFPRTKQHRAINSFPYANGQ
DHVPAPRGPHTFSTTSSGVPFAVPPKLAATAMGPYASGKSDSNGGVKRTV
SGSVIFHPIQTKTAPSHQANNQVRPTLSHAAKKGVPTNSMTKPVSDGGES
RSSNGTENGHTNGKFWKTVIGGEKGRAILRAAESMQKMRYGVLASKSAEE
CHGEKSLKNGMATPVATSTTEENVADTVRNPSPPKKRKSEPCPSDDGGET
GETTLHINGHSIPESDVQLLLSSAADISAREEERKRSSGSSSDHISVPRE
ERKERNISPRQTVSRSRPPSSSGKPVSSRNRKEGSERAVSRSSTARPFKC
TRCPSSFDRDGHLRVHILAVHEKKRPFVCQVCDASFGHSSSLLRHVRTVH
QASPAIGSGKSGARNGQRNSDSKSGRSDENGEDLIDDSEKHFRCSVCAQA
FDRVALLNRHVANKHPLRSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf