Gvermi6791.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6791.t1
Unique NameGvermi6791.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length313
Homology
BLAST of Gvermi6791.t1 vs. uniprot
Match: A0A2V3IXH8_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXH8_9FLOR)

HSP 1 Score: 345 bits (885), Expect = 9.210e-116
Identity = 194/303 (64.03%), Postives = 241/303 (79.54%), Query Frame = 0
Query:   12 PTPASPMQ-FTLITSRSALVSILSATIQAHVSANDQLPEPPFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATFIEIESNLVSGLKVMAANASHAVVTDLVTQARNALLDPELHAIPFEHLPGEQPQKPTTTTPCFLPXXXVTSPAAVAS-VETSLSRNSSLASVKDEEL-VQPPPSRRLSFT-RSFMRRRSSKTFSKVSHSPISPDNSYRQRARASLG 310
            PT   P + FTL+ SR ALV+ILSATIQAHV+ANDQLPEP  D+MTVFHALEAPAI+V EYV+R+SKYAFCS+ACLVAAYHY+TRAI  DPKLAL+SLS+HR+FITA+VLA KY DDLSYNLVYY+KVGGLP+ EL+NLEM MLH+LDFRLDI    F+E+ESNLVSGLKV+ ANAS AVV +LV  A++ L+  +   + +E  PGE+    T +         V+SP++  + V+T+LSRNSSLASV DE L  Q    RRLS++ ++F R+RSSKT+S+ SHSPISP+++YR+RARASLG
Sbjct:   14 PTSVRPSKNFTLLASRQALVAILSATIQAHVAANDQLPEPALDQMTVFHALEAPAISVCEYVTRLSKYAFCSDACLVAAYHYMTRAIASDPKLALTSLSIHRMFITALVLACKYMDDLSYNLVYYSKVGGLPYKELANLEMQMLHILDFRLDISPNQFVELESNLVSGLKVLEANASKAVVLNLVDHAKSLLMQSDSRGVAYEPFPGEKLVDDTESP--------VSSPSSSTTCVDTALSRNSSLASVPDEALYAQAAHPRRLSYSHKNFARQRSSKTYSRFSHSPISPESAYRRRARASLG 308          
BLAST of Gvermi6791.t1 vs. uniprot
Match: R7QMA3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMA3_CHOCR)

HSP 1 Score: 220 bits (561), Expect = 9.640e-67
Identity = 120/198 (60.61%), Postives = 151/198 (76.26%), Query Frame = 0
Query:    5 ISAKTVEPTPASPMQFTLITSRSALVSILSATIQAHVSANDQLPEPPFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATFIEIESNLVSGLKVMAANASHAVVTDLVTQARNAL 202
            ++A+  E   +  ++F+LITS  ALV+++ A IQA VS ND  P  PF++MTVFHA E PAI+V++YV+RVSKYAFCS ACLVAA +YI  AI KDPKLALSSLSVHRLFITA++LASKY+DD+SYNL YYAKVGGLP  EL+NLE+++L +L+FRLDIPA  F  IE+NLV  L V  A+     +T +V  AR  L
Sbjct:    1 MTAQLFETDSSDAVKFSLITSPPALVAVIIANIQAQVSVNDAKPPAPFEDMTVFHAQEPPAISVADYVARVSKYAFCSHACLVAASYYIDEAIRKDPKLALSSLSVHRLFITAVILASKYFDDVSYNLPYYAKVGGLPFKELANLEINLLSVLNFRLDIPAQKFAAIETNLVDQLDVFEAHPIDEELTRVVDVARYEL 198          
BLAST of Gvermi6791.t1 vs. uniprot
Match: D8SP78_SELML (Uncharacterized protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SP78_SELML)

HSP 1 Score: 121 bits (303), Expect = 4.880e-30
Identity = 59/140 (42.14%), Postives = 94/140 (67.14%), Query Frame = 0
Query:   29 LVSILSATIQAHVSANDQLPEPPFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATF 168
            ++S+L++ ++  V+ N +       ++TVFH L AP+I++ +Y+ R+ KYA CS AC V AY Y+ R I + P + ++SL+VHRL IT++++A+K+ DD  YN  YYAKVGG+  +E++ LE+  L  LDFRL +    F
Sbjct:    7 VISVLASLLERVVARNHRHLGGGATKLTVFHGLRAPSISIEKYLERIFKYANCSPACFVVAYAYMDRFIHQQPDVPITSLNVHRLLITSVMVAAKFLDDAYYNNAYYAKVGGVSTLEMNRLELQFLFRLDFRLQVTVTMF 146          
BLAST of Gvermi6791.t1 vs. uniprot
Match: A0A388M0G0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M0G0_CHABU)

HSP 1 Score: 121 bits (304), Expect = 2.320e-28
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 0
Query:   27 SALVSILSATIQAHVSANDQLP--EPPFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATFIEIESNL 175
            + L+  L A  + HV      P   P   ++TVFH L AP+I + +Y+ R+ KYA CS AC V AY YI R I + P+L ++SL+VHRL +TA+++A+K+ DD+ +N  YYAKVGG+   E++ LE+  L  LDFRL +    F    S+L
Sbjct:   48 ATLLERLVARNERHVMTTATTPYASPCRGKLTVFHGLRAPSITIDKYLERIFKYANCSPACFVVAYVYIDRLIQRQPELPITSLNVHRLLVTAVMVAAKFLDDVYFNNGYYAKVGGVTTAEMNRLELEFLFRLDFRLHVTTGVFEHYSSHL 198          
BLAST of Gvermi6791.t1 vs. uniprot
Match: A0A2R6W0P2_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W0P2_MARPO)

HSP 1 Score: 120 bits (300), Expect = 2.500e-28
Identity = 62/150 (41.33%), Postives = 97/150 (64.67%), Query Frame = 0
Query:   26 RSALVSILSATIQAHVSANDQLP-------EPPFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATF 168
            R  ++++LS+ +   V+ N++          PP  ++TVFH L AP I++ +Y+ R+ KYA CS +C V AY YI R I + P + ++SL+VHRL IT++++A+K+ DD  YN  YYAKVGG+  +E++ LE+  L  LDFRL +  + F
Sbjct:   86 RPRVLAVLSSLLDRVVARNERQALVLNRSLSPP--KLTVFHGLRAPTISIEKYLERIFKYANCSPSCFVVAYAYIDRFIHQQPGIPITSLNVHRLLITSVMVAAKFLDDAYYNNAYYAKVGGVTTLEMNRLELDFLFRLDFRLQVTVSVF 233          
BLAST of Gvermi6791.t1 vs. uniprot
Match: D8R719_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R719_SELML)

HSP 1 Score: 115 bits (288), Expect = 5.490e-28
Identity = 58/144 (40.28%), Postives = 92/144 (63.89%), Query Frame = 0
Query:   29 LVSILSATIQAHVSANDQLPEPP----FDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATF 168
            ++++LS+ +   V  N++            +TVFH L AP+I++ +Y+ R+ KYA CS +C V AY YI R I + P L ++SL+VHRL +T++++A+K+ DD  YN  YYAKVGG+   E++ LE+  L  L+FRL +  + F
Sbjct:    2 ILAVLSSLLDRVVVKNERYAASATANGHSNLTVFHGLRAPSISIDKYLERIFKYANCSPSCFVVAYVYIDRFIQQKPSLPITSLNVHRLLVTSVMVAAKFLDDAYYNNAYYAKVGGVNTQEMNRLELEFLFHLNFRLQVTVSVF 145          
BLAST of Gvermi6791.t1 vs. uniprot
Match: A0A176W9U7_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176W9U7_MARPO)

HSP 1 Score: 120 bits (300), Expect = 5.610e-28
Identity = 62/150 (41.33%), Postives = 97/150 (64.67%), Query Frame = 0
Query:   26 RSALVSILSATIQAHVSANDQLP-------EPPFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATF 168
            R  ++++LS+ +   V+ N++          PP  ++TVFH L AP I++ +Y+ R+ KYA CS +C V AY YI R I + P + ++SL+VHRL IT++++A+K+ DD  YN  YYAKVGG+  +E++ LE+  L  LDFRL +  + F
Sbjct:   46 RPRVLAVLSSLLDRVVARNERQALVLNRSLSPP--KLTVFHGLRAPTISIEKYLERIFKYANCSPSCFVVAYAYIDRFIHQQPGIPITSLNVHRLLITSVMVAAKFLDDAYYNNAYYAKVGGVTTLEMNRLELDFLFRLDFRLQVTVSVF 193          
BLAST of Gvermi6791.t1 vs. uniprot
Match: A0A7S3RJ16_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RJ16_9SPIT)

HSP 1 Score: 117 bits (292), Expect = 6.930e-28
Identity = 62/138 (44.93%), Postives = 94/138 (68.12%), Query Frame = 0
Query:   25 SRSALVSILSATIQAHVSANDQLPEPPFDEMTVFHALEAPAIAVSEYVS-RVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRL 161
            S   +VS++S  ++  VS NDQLP  P  ++T FH+ + PAI V  Y+  R+ KYA CSE   + A  YI + +  +P   ++SL+VHRL IT+I+LASK++DD+ YN  YYA+VGG+ ++E+++LEM ML ++ F L
Sbjct:   13 SPDVIVSVMSKLLEDLVSRNDQLPLAP-SQVTPFHSSKPPAITVRSYLEDRILKYAGCSEETFILALIYIDQVVQFNPDFIINSLNVHRLLITSIMLASKFFDDVYYNNAYYARVGGISNVEVNSLEMEMLRMISFSL 149          
BLAST of Gvermi6791.t1 vs. uniprot
Match: A0A6A1URX6_9ROSI (Cyclin-P3-1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1URX6_9ROSI)

HSP 1 Score: 117 bits (292), Expect = 7.290e-28
Identity = 64/149 (42.95%), Postives = 97/149 (65.10%), Query Frame = 0
Query:   22 LITSRSALVSILSATIQAHVSANDQLPEPPF--DEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATF 168
            L+T R  ++S+LS+ ++  V  N+ L E     D +T+FH L AP ++V +Y+ R+ KY+ CS +C V A  Y+ R + +   + L+SL+VHRL IT+++LA+K+ DD  +N  YYAKVGG+   EL+ LEM  L  +DFRL +P  TF
Sbjct:   29 LVTPR--VLSLLSSLLERSVQKNEMLLESTQIEDAVTIFHGLRAPTLSVRQYIDRIFKYSGCSPSCFVVAQIYVERFL-QSTDILLTSLNVHRLLITSVMLAAKFIDDAFFNNAYYAKVGGVSTAELNRLEMKFLFSIDFRLQVPLETF 174          
BLAST of Gvermi6791.t1 vs. uniprot
Match: UPI001C4FB882 (cyclin-P3-1 n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001C4FB882)

HSP 1 Score: 117 bits (292), Expect = 7.860e-28
Identity = 62/142 (43.66%), Postives = 94/142 (66.20%), Query Frame = 0
Query:   29 LVSILSATIQAHVSANDQL--PEPPFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKDPKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLEMHMLHLLDFRLDIPAATF 168
            ++S+LS+ ++  V  N++L       D +T+FH L AP++++ +YV R+ KY+ CS +C V AY YI R I +   + LSSL+VHRL IT++++A+K+ DD  YN  YYAKVGG+   E+++LE   L  LDFRL +   TF
Sbjct:   34 VLSVLSSLLERSVQKNEKLLGTTQKKDSVTIFHGLRAPSLSIRQYVDRIFKYSSCSPSCFVVAYIYIERFIQRTD-VHLSSLNVHRLVITSVMVAAKFIDDAFYNNAYYAKVGGVSTAEMNSLETKFLFSLDFRLHVTVGTF 174          
The following BLAST results are available for this feature:
BLAST of Gvermi6791.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXH8_9FLOR9.210e-11664.03Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
R7QMA3_CHOCR9.640e-6760.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
D8SP78_SELML4.880e-3042.14Uncharacterized protein (Fragment) n=3 Tax=Selagin... [more]
A0A388M0G0_CHABU2.320e-2843.05Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A2R6W0P2_MARPO2.500e-2841.33Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
D8R719_SELML5.490e-2840.28Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
A0A176W9U7_MARPO5.610e-2841.33Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A7S3RJ16_9SPIT6.930e-2844.93Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A6A1URX6_9ROSI7.290e-2842.95Cyclin-P3-1 n=1 Tax=Morella rubra TaxID=262757 Rep... [more]
UPI001C4FB8827.860e-2843.66cyclin-P3-1 n=2 Tax=Proteaceae TaxID=4328 RepID=UP... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 54..161
e-value: 2.9E-26
score: 92.8
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 24..247
NoneNo IPR availableGENE3D1.10.472.10coord: 17..201
e-value: 6.6E-42
score: 145.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..277
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 71..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2314373..2315311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6791.t1Gvermi6791.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2314373..2315311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6791.t1 ID=Gvermi6791.t1|Name=Gvermi6791.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=313bp
MTVQISAKTVEPTPASPMQFTLITSRSALVSILSATIQAHVSANDQLPEP
PFDEMTVFHALEAPAIAVSEYVSRVSKYAFCSEACLVAAYHYITRAITKD
PKLALSSLSVHRLFITAIVLASKYYDDLSYNLVYYAKVGGLPHMELSNLE
MHMLHLLDFRLDIPAATFIEIESNLVSGLKVMAANASHAVVTDLVTQARN
ALLDPELHAIPFEHLPGEQPQKPTTTTPCFLPPPPVTSPAAVASVETSLS
RNSSLASVKDEELVQPPPSRRLSFTRSFMRRRSSKTFSKVSHSPISPDNS
YRQRARASLGVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf