Gvermi6786.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6786.t1
Unique NameGvermi6786.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length546
Homology
BLAST of Gvermi6786.t1 vs. uniprot
Match: A0A2V3IXN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN0_9FLOR)

HSP 1 Score: 564 bits (1454), Expect = 8.000e-195
Identity = 285/544 (52.39%), Postives = 391/544 (71.88%), Query Frame = 0
Query:    1 MPRSSTKFQAPPSACIEEALVWLLGLSFGEHDDGVQRSLISRKLGEIINLWASGLLAADFSAEEVENTFAAFSKLVQTDNVPDLINWSEISISDVDLLIHIHWVRASRNMIDLPLPPAKPLETAIDSLTVALKLLDCIAAKDNRRSAAANTAPAHLLFSVLRLTISTEHEHNHRSSNVRVLCDQLLSHLNRMRRTGSKSHLFSSLLSHILPLIRTAVGGDLSSFKAPYSVHQAAPASHVLHTLLCEVEDDKLIESVNEIMPTLQTLVESVQEEIRIQALHSMSLLSSRLSVSAMEPTETSKSLQASLAWGDVPTSMVAIPLLATFLPATKPKESRGEDYVKSVSKVIDIVVRHMQKRSESPEANGHDLPDLTDAKAAIELSTFVPSLARDLLICRTDWIIALCDFLQRLAVLLRRGSVPIEDVIRILAVLKDSIKWAWIRVDSFRREVFENCLSSIMETRSVSESFLIQTTARDVILLLGKCGQVERLLDMTAEVRTCARDYESLATAAEFCKDIEDIIAFEGEDNYNGTISAGTLVHRFFPEL 544
            M  S+ +  A PS  IE A+V LLGLSFGEHDDG QR +IS+KL ++IN W SGLLAADF+++EVE TF AFSKL+ ++ VP+LI WSE+ ISD+D LIH+HWVRASRN+I+LPLPPAKP+E AIDSL+  LKLLD  AAKDNRRSAAANTAPAHL+F+  RL +S E   N  +  +  +C++ L HL RMRR   K+ L SSL   ++PLIR AV  DL++ K  Y++H  AP SHVLH L+C+  D  L ++  E++  L+ L E+VQE IR+QAL+SMS LSSR+ + +M+P++T +SL +++ W D PT M AIPLLA  LP T+  +S+   Y  +VSK+++ +VR MQ R E+  +N      LT+AKAA+EL+  VP L ++L++    W+ AL DF +R+A + R G + + D++ +L VL DS+KWAW+RVDSFR +VFE CLS  MET+ V +SFLI+T  + ++L LGKCG+V+++L++  EVR  +  Y+SL + AEFCK+IE+ I+FE E++   TI+ G L  RFF EL
Sbjct:    1 MSPSTIRTTALPSKFIERAIVLLLGLSFGEHDDGTQRRVISQKLADVINKWVSGLLAADFASDEVEATFLAFSKLLHSEGVPELIMWSEVPISDIDSLIHLHWVRASRNLIELPLPPAKPIELAIDSLSTGLKLLDFAAAKDNRRSAAANTAPAHLIFATTRLLLSRERLPNRETERIGFVCEESLEHLLRMRRFERKADLLSSLFQSVIPLIRLAVEVDLNTLKPAYNIHCIAPTSHVLHRLMCDATDQNLNDNAGEVLAILRDLAEAVQEHIRVQALYSMSFLSSRIPLFSMQPSKTCESLLSAIVWNDAPTLMTAIPLLAALLPRTRISDSQARRYSAAVSKIVETIVRLMQTR-ENGTSNAEHALVLTNAKAAVELAGLVPPLLKELMMRHMGWLTALSDFAKRIANMARHGDIQVSDIVHVLTVLSDSVKWAWLRVDSFRSDVFEACLSVFMETKDVEDSFLIRTEIKRIVLQLGKCGRVDQILEIVQEVRQSSNGYDSLRSVAEFCKEIENDISFENENDDQATIAGGALFSRFFSEL 543          
The following BLAST results are available for this feature:
BLAST of Gvermi6786.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXN0_9FLOR8.000e-19552.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2277985..2279622 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6786.t1Gvermi6786.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2277985..2279622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6786.t1 ID=Gvermi6786.t1|Name=Gvermi6786.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=546bp
MPRSSTKFQAPPSACIEEALVWLLGLSFGEHDDGVQRSLISRKLGEIINL
WASGLLAADFSAEEVENTFAAFSKLVQTDNVPDLINWSEISISDVDLLIH
IHWVRASRNMIDLPLPPAKPLETAIDSLTVALKLLDCIAAKDNRRSAAAN
TAPAHLLFSVLRLTISTEHEHNHRSSNVRVLCDQLLSHLNRMRRTGSKSH
LFSSLLSHILPLIRTAVGGDLSSFKAPYSVHQAAPASHVLHTLLCEVEDD
KLIESVNEIMPTLQTLVESVQEEIRIQALHSMSLLSSRLSVSAMEPTETS
KSLQASLAWGDVPTSMVAIPLLATFLPATKPKESRGEDYVKSVSKVIDIV
VRHMQKRSESPEANGHDLPDLTDAKAAIELSTFVPSLARDLLICRTDWII
ALCDFLQRLAVLLRRGSVPIEDVIRILAVLKDSIKWAWIRVDSFRREVFE
NCLSSIMETRSVSESFLIQTTARDVILLLGKCGQVERLLDMTAEVRTCAR
DYESLATAAEFCKDIEDIIAFEGEDNYNGTISAGTLVHRFFPELT*
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