Gvermi6812.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6812.t1
Unique NameGvermi6812.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length221
Homology
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A2V3J4D9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4D9_9FLOR)

HSP 1 Score: 405 bits (1041), Expect = 5.920e-136
Identity = 195/220 (88.64%), Postives = 208/220 (94.55%), Query Frame = 0
Query:    1 MEDVKWYNYMRVNGVKIISSGQPVLDDPERHIYVSTCYVIQSPVTPFIIRTTSSYWQVLRTLSPHVDVVRLVERFSSYPLSSMIGIHIRGKNIKTDITGVNATDYSEESSRTTDYWRNLTKVDSFVEEMRKQTADQLFYVAADQKEVLTKLEHEFPSRIFYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLLAGIDFGRP 220
            M+ VKWY+YMRVNGVK  SS +PVLDD + HIYVSTCYVIQSPVTPFIIRTTSSYWQVLR+L+PHV VVRLVERFSSYPLSSMIGIHIRGK+IKTDI GVNATDYSEESSRTTDYWRNLT VD+F++EMRKQTADQ+FYVAADQKEV  +LEHEFPSR+ YTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLLAGIDFGRP
Sbjct:  455 MKHVKWYSYMRVNGVKATSSEEPVLDDAKHHIYVSTCYVIQSPVTPFIIRTTSSYWQVLRSLTPHVSVVRLVERFSSYPLSSMIGIHIRGKSIKTDINGVNATDYSEESSRTTDYWRNLTNVDTFIDEMRKQTADQMFYVAADQKEVFARLEHEFPSRVVYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLLAGIDFGRP 674          
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A1X6P1X2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1X2_PORUM)

HSP 1 Score: 163 bits (412), Expect = 1.330e-42
Identity = 92/222 (41.44%), Postives = 138/222 (62.16%), Query Frame = 0
Query:    9 YMRVNGVKIISSGQPVLDDP---ERHIYVSTCYVIQSPVTPFI-----IRTTSSYWQVLRTLSPHVDVVRLVERFSSYPLSSMIGIHIRGKNIKTDITGVN--ATDY-SEESSRTTDYWRNLTKVDSFVEEMRKQTADQL-FYVAADQKEVLTKLEHEFPSRIFYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLLAGIDFG 218
            +MR + V ++S+G  VLD      +H+Y+ T YV+++ V P +      +  S     +RTL+P V V+RLVE   +  ++  IG+H+R +++  DI G+     +Y SE+S   T+YWRN T++ +FV++MR      L FYVAAD  E +  L   FP RI +TPR CD R RDCL +ALAD++LL++   + GSYWSSF+E + R+G  +  LAG+DFG
Sbjct:  568 FMRKDRVDVLSAGAHVLDVDAVASQHLYIKTAYVVRTTV-PLMEDGSQAKPYSPVCLAMRTLTPVVPVLRLVEGNVANGVADTIGVHVRSRSLARDIVGLADPVAEYGSEKSLAVTEYWRNTTQLPAFVDKMRSFNDSSLRFYVAADDAEAIAALTAAFPGRILHTPRSCDDRGRDCLRYALADMILLSRTKLILGSYWSSFTEAAMRLGSQKVHLAGVDFG 788          
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A7S1T5E1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T5E1_9RHOD)

HSP 1 Score: 134 bits (338), Expect = 4.080e-33
Identity = 87/230 (37.83%), Postives = 130/230 (56.52%), Query Frame = 0
Query:    3 DVKW-----YNYMRVNGVKIISSGQPVLDDPERHIYVSTCYVIQSP-VTPFIIRTTSSYWQVLRTLSPHVDVVRLVERFSSYP-----LSSMIGIHIRGKNIKTDITGVNAT-DYSEESSRTTDYWRNLTKVDSFVEEMRKQTADQ---LFYVAADQKEVLTKLEHEFPSRIFYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLLAGIDF 217
            DV W     YNYM   G    S   PV  +  RHIY+ + Y I +P +T + + T     Q L+ LSP   V RL++   S        SS +G+H+RG+ +  DI GVN + +Y  E++R  +Y+R  ++  +F+E+M+ + AD+    F+VA+D    + ++   FP +I    R CD R+R CL  ALAD+ LL+K   + GS WSSFSE+++R G  + LLAG DF
Sbjct:  333 DVAWSHVDVYNYMEAEGG---SKSAPVRHNSSRHIYIKSAYSIVAPGITKWRLDT-----QHLQRLSPSSSVQRLMDSVLSAAGGESSFSSFVGVHVRGRTLSEDIRGVNGSLEYGHEAARMIEYYRGQSQPAAFLEKMQ-ELADRERASFFVASDSMSAIAEIRRHFP-QILVLKRSCDERERLCLQEALADLCLLSKTRLILGSPWSSFSEVASRFGNVKLLLAGRDF 552          
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A5J4Z6Z7_PORPP (Glyco_trans_2-like domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6Z7_PORPP)

HSP 1 Score: 131 bits (329), Expect = 1.760e-31
Identity = 79/226 (34.96%), Postives = 124/226 (54.87%), Query Frame = 0
Query:    7 YNYMRVNGVKIISSGQPVLDDP-ERHIYVSTCYVIQSPVTPFIIRTTSSYW----QVLRTLSPHVDVVRLVERFSSY---PLSSMIGIHIRGKNIKTDITGVNATDYSEESSRTTDYWRNLTKVDSFVEEMRKQTADQ---LFYVAADQKEVLTKLEHEFPSRIFYTPR---HCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLLAGIDFG 218
            YNYM   G   +      +D+   RHIY  + Y++Q+       +   S W    Q+LR L P  +V  +VE  +      L + +G+HIR  ++ +DI GV   +YS+ +  T DYWR+  +   F +EM+   A+     F++AAD  + +T L++  P R+   PR    C+ RD +C+ +ALAD+L LA+  +L GS WSSF+E++ R+G     LAG+DFG
Sbjct:  769 YNYMDTEGYGAVKDA--FIDNSLTRHIYFKSAYIMQT-------KGQYSSWDSENQMLRLLRPVPEVQTIVEEVNRQIMGGLKNCVGVHIRHLSLDSDIKGVQKDEYSQSAQETMDYWRSKARPQIFEKEMKAILAESPSTCFFLAADGADTVTYLKNALPDRVITLPRPNRSCEFRDAECVKYALADVLCLARTRALLGSNWSSFTEMALRLGHKNARLAGVDFG 985          
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A7S0ZHN8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHN8_9RHOD)

HSP 1 Score: 121 bits (304), Expect = 1.560e-28
Identity = 78/233 (33.48%), Postives = 120/233 (51.50%), Query Frame = 0
Query:    8 NYMRVNGVKIISSGQPVLDDPER---------HIYVSTCYVIQS-------PVTPFIIRTTSSYWQVLRTLSPHVDVVRLVERFSSYPLSSMIGIHIRGKNIKTDITGVNATD-----YSEESSRTTDYWRNLTKVDSFVEEMRKQTADQLFYVAADQKEVLTKLEHEFPSRIFYTP-RHCDS-RDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLLAGIDF 217
            N +  +   +I+   P    P +         ++Y+ + Y I S       P  PF    T+ Y ++LR  S    V R+V  F    +  MIG+H+RG  ++ +    N T+     Y   +  TT+YWR  T  D+F++ M+   +   F+VA+D +  L  LE +FP RI +     C   RD  C+ +A+AD+ LL++C SL GSY+SSFSE++TR+G    LLAG DF
Sbjct:  286 NCLETSAYNLIAKENPDRTHPSKFYIPNSVGLNVYIKSAYFISSXXXVTSQPTVPFA--PTNVYIRMLRFAS---QVERIVAEFMPEGIEEMIGVHVRGLAVEEERKEANGTERAIDEYGASNLNTTNYWRRQTTSDAFIDRMKLFDSSVHFFVASDSEAHLVVLEKQFPGRIHHISCGECGQPRDTKCVQYAVADLFLLSQCKSLLGSYYSSFSEVATRMGSGESLLAGRDF 513          
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A7S0T461_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T461_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 1.340e-21
Identity = 73/250 (29.20%), Postives = 119/250 (47.60%), Query Frame = 0
Query:    2 EDVKWYNYMRVNGVKIISSGQPVLDDPE---RHIYVSTCYVIQSPVTPFIIRTTSSYWQVLRTLSPHVDV-VRLVER---------FSSYPLSSMIGIHIRGKNIKTDITGVN-ATDYSEESSRTTDYWRNLTKVDSFVEEMRK---------------QTADQLFYVAADQKEVLTKLEHEFP-SRIFYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGAR--FLLAGIDFGR 219
            ++ + Y+YM ++G       +  LD  E   R IY  + Y+  +    +      +      T    V V V  VE               L   +G+H+R +++  DI  V  A +YS E+ R  + WR  +    F+EEM++                ++  +F+VAAD +  L ++++E P   + + PR CDSR R+C+ +A AD+L LA+   L GS WSSF+EL+ R+        LAG+DFG+
Sbjct:  727 KEFELYDYMELDGGSAKKGRRMELDREEIRTRSIYFKSAYIAATAREEWSSWVLDNSHIAALTARREVSVLVNAVEEQVKNAVVGGHRGRGLEQAVGVHVRSRSLDEDIEDVEKAKEYSVEAQREMEAWRQRSNARVFIEEMQRILKEEQLQLQQQHGHSSSGTVFFVAADSEHALREIQNEMPRGSVVFIPRTCDSRARECVQYAFADVLCLARTRLLLGSNWSSFTELAQRLAAKHRPSRLAGVDFGK 976          
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A0F9X654_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9X654_9ZZZZ)

HSP 1 Score: 71.6 bits (174), Expect = 7.020e-11
Identity = 64/221 (28.96%), Postives = 96/221 (43.44%), Query Frame = 0
Query:    8 NYMRVNGVKIISSGQPVLDDPERHIYVSTCYVIQSPVTPFIIRTTSSYWQVLRTLSPHVDVVRLVERFSSYPLSSMIGIHIRGKNIKTDITGVNATDYSEESSRTTD------YWRNLTKVDSFVEEMRKQTADQ---LFYVAADQKEVLTKLEHEFPSRIFYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGA--RFLLAGIDF 217
            NYM +   +  + G P+     R  Y+ + YVI  P +     T  S    LR L P   V  L+   + +     IG+H+R +       G +   Y    + T D      +WR  +    F+  +    ADQ     ++AAD  +        + +R+ +  R    R    L +ALAD+LLLA+C  L GS WSSFSEL+ R+         +GIDF
Sbjct:  617 NYMEIE--QGAAKGAPLELVTGRDAYLRSAYVIAHPAS-----TWDSENAALRALRPAAPVRALMRGVADH---RDIGLHVRMEGAP----GTDTHSYDRRENWTADGHAAIHHWRGQSHYSRFMTRLDALLADQPEARVFLAADLPDTYRAFAETYGARVAWLERAVYDRSGVQLQYALADMLLLARCRQLLGSNWSSFSELALRLSDTITHHERSGIDF 823          
BLAST of Gvermi6812.t1 vs. uniprot
Match: A0A1H3CRV5_9RHOB (Uncharacterized protein n=1 Tax=Roseicitreum antarcticum TaxID=564137 RepID=A0A1H3CRV5_9RHOB)

HSP 1 Score: 63.5 bits (153), Expect = 2.260e-8
Identity = 59/221 (26.70%), Postives = 101/221 (45.70%), Query Frame = 0
Query:    7 YNYMRVN-GVKIISSGQPVL--DDPERHIYVSTCYVIQSPVTPFIIRTTSSYWQVLRTLSPHVDVVRLVERFSSYPLSSMIGIHIRGKNIKTDITGVNATDYSEESSRTTDY--WRNLTKVDSFV---EEMRKQTADQLFYVAADQKEVLTKLEHEFPSRIFYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSELSTRIGGARFLL--AGIDF 217
            YNYM +  G +     +P+L   D    +Y+ + YV+ SP      R  +   + LR L P   V  LV R         + +HIR  +       V+ +  +  + R ++   WR  +  D F+   + +R     +  ++A D  +   +L   + + +    R    R    + +ALAD++LLA+C  L  S WSSFS+++ R+G    L+  +GIDF
Sbjct:   97 YNYMEIEPGARF---QEPILATGDVAGDVYIRSAYVLNSPH-----RDPALEERFLRRLVPSAPVRDLVSRVRRL---CDVAVHIRMASGAGFEHLVHESPDNWPAHRHSEMVEWRKKSHADHFIARLDALRAVGGLRTIFLATDLAQTYARLAERYGADLVCLERDLYDRSTLQIQYALADLILLARCPRLLASSWSSFSDMAERLGPCNVLIERSGIDF 306          
The following BLAST results are available for this feature:
BLAST of Gvermi6812.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J4D9_9FLOR5.920e-13688.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P1X2_PORUM1.330e-4241.44Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1T5E1_9RHOD4.080e-3337.83Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z6Z7_PORPP1.760e-3134.96Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A7S0ZHN8_9RHOD1.560e-2833.48Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0T461_9RHOD1.340e-2129.20Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A0F9X654_9ZZZZ7.020e-1128.96Uncharacterized protein n=1 Tax=marine sediment me... [more]
A0A1H3CRV5_9RHOB2.260e-826.70Uncharacterized protein n=1 Tax=Roseicitreum antar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 68..208
e-value: 1.0E-17
score: 65.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2368434..2369096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6812.t1Gvermi6812.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2368434..2369096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6812.t1 ID=Gvermi6812.t1|Name=Gvermi6812.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=221bp
MEDVKWYNYMRVNGVKIISSGQPVLDDPERHIYVSTCYVIQSPVTPFIIR
TTSSYWQVLRTLSPHVDVVRLVERFSSYPLSSMIGIHIRGKNIKTDITGV
NATDYSEESSRTTDYWRNLTKVDSFVEEMRKQTADQLFYVAADQKEVLTK
LEHEFPSRIFYTPRHCDSRDRDCLPFALADILLLAKCASLRGSYWSSFSE
LSTRIGGARFLLAGIDFGRP*
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