Gvermi6770.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6770.t1
Unique NameGvermi6770.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1128
Homology
BLAST of Gvermi6770.t1 vs. uniprot
Match: A0A2V3J418_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J418_9FLOR)

HSP 1 Score: 383 bits (984), Expect = 4.210e-113
Identity = 198/311 (63.67%), Postives = 242/311 (77.81%), Query Frame = 0
Query:  817 NPYQSPQQPLSSSSPTRLTALFSLPFAADVR----PKPEDTPHEVAKQLHEAGGLNLESSSSVFRVIRKKPRSPSATTESEDDDESSIEFVTLRPHTAEVLPWKAREGSEYIDVTNGALAVKPLAAVASRFGTACLNASLRIVEPMRMPACRKDFCYISPEYPDGTSLPYVPVNHVILQHQPPTWDKEETYGINKVRLSFQKHVFKEVEAIAIKAYQDRYPGANVNCVSRVTSTRVRKYVEIDEDAKVDVSSFFGKPMRLGVPEALSLIELDIVGLVLLYIGVDAKNNDGSEAELAFRLHSMVMKRVVSKK 1123
            +PY+SP      S  +RL  +F +P  ADV     P+ EDTP EVAK+L+E G    E+ SSVFRVIRKK R  S+++E E + +  +EFVTLRP T+EVLPWKAREGSE+IDVTNGALAVKP AA+ASR GT   +A+LR++EP+RMPA RKDFCYISPEYPDGTSLPY+PVN+VI+QHQP  W  E  YG+N V+LSF K VF++++++AI  YQ++YPGA V C    T  RVRK +EID DA VDVS+FFG+PMRLGV EAL +IELD+VGLVLLY+GVDAKN+DGSEAELAFRL SMVM+R   KK
Sbjct:  609 DPYRSPAGAEGPSVASRLKTIFGMPLIADVIADVIPQSEDTPAEVAKKLYEVGEHAHEACSSVFRVIRKKRRQGSSSSEDEGEKDH-VEFVTLRPQTSEVLPWKAREGSEFIDVTNGALAVKPSAAIASRLGTPSFSANLRVLEPVRMPASRKDFCYISPEYPDGTSLPYIPVNNVIMQHQPRNWSGEP-YGVNNVQLSFPKLVFEKIKSLAINVYQEQYPGAAVACEGHSTLKRVRKIIEIDSDATVDVSTFFGRPMRLGVAEALGIIELDLVGLVLLYVGVDAKNHDGSEAELAFRLQSMVMRRHAKKK 917          
BLAST of Gvermi6770.t1 vs. uniprot
Match: R7QG73_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG73_CHOCR)

HSP 1 Score: 77.8 bits (190), Expect = 5.120e-11
Identity = 71/235 (30.21%), Postives = 107/235 (45.53%), Query Frame = 0
Query:  902 FVTLRPHTAEVLPWKAREGSEYIDV-TNGALAVKPLAAVASRFGTACLNASLRIVEPMRMPACRKDF----CYISPEYPDGTSLPYVPVNHVILQH------QPPTWDKEE----TYGINKVRLSFQKHVFKEVEAIAIKAYQDRY-PGANVNCVSRVTSTRVRKYVEIDEDAKVDVSSFFGKPMRLGVPEALSLIELDIVGLVLLYIGVDAKNNDGSEAELAFRLHSMVMKRVV 1120
            + T+      + P +A E S Y+ V     LA+   A  +    TA L  ++ I EP  +P    +      Y+   YPDGTSLPY+P+  V++Q+      Q    +KE     TYG + V LS  + V++ +   A KA+  R+ P    N        RV  Y  +   AKV   +  GK    GV +AL L   D+ G  ++Y+     +N  SE  L FR H + M+R +
Sbjct:  185 YTTVFTPKIPMTPIRALETSAYLGVGPTRTLAIMSPAFASMVNDTARLEVNVVINEPF-VPVHTSELPITIMYLGFLYPDGTSLPYIPIRDVVIQYRQSVGKQSQIKNKERSCYVTYGHDFVYLSMPRPVYERLVRAARKAFHSRFHPDRKWNTEVDYDGDRVWVYAGMKPGAKVQGLAD-GKMGERGVRDALRLSGTDLEGNAMMYMRFSFPHNQDSEPSLCFRFHKLSMEREI 417          
The following BLAST results are available for this feature:
BLAST of Gvermi6770.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J418_9FLOR4.210e-11363.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG73_CHOCR5.120e-1130.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 813..833
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 720..747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 686..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..833
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 748..764
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 768..809
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2228016..2231399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6770.t1Gvermi6770.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2228016..2231399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6770.t1 ID=Gvermi6770.t1|Name=Gvermi6770.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1128bp
MSVSTQRSTKGVLRNLNRLTDALLEENSRLQYALNEARAQIESLHVRLEL
LRRDVAARDRYDGEVRDHVAAIIGDIQTHYKPLLQSSSHSFDPLSASPIR
SALADIHAESEHHPSHPDTHHLSPPLSTDDNRPAHDASPLEHERAAEPQP
EPTAEHTEEHPNEATPPPRTVVTVVRKTIKTRQAIVLTPRNAQHTSGSEH
SAEHERPQQPLRAEEGSTHHIQDPNASAQEPAEPELARSADTDHELHTAQ
DRAELSQGEYIPEPSPIEHNEPHLNEQQPEPQQEHIEHDLQFSPEELPSE
QDREAPRDLVDFEAIRSAPAMDKLFNLQNATDHEQHDEPLDAPQFPAVLV
PEPHDGIDFEATRSTSTVNKPANRQNASDHEHDDEAADASRVSAVPIPET
HDVIDFEATRSAPAVNKPTYLQNASDHEQYGEEADASPYSAVLVREPHNA
IDFDATRSAPAMDKPANLQNISDQEQYDEAMDAPRFPAVLVPEPHDGVDF
EAPRSTPAVEQPANLQNVSDHEQYDDDEAMDASRFSSVLVPEPRDAIDAD
VVRSTPAVEQPANLQNVSDHEQYDNDEAIDASQFSSVPVPEPRDAIDSEA
TPSTPAVVQPANLQNVSDHEQYDDEAMDASQFSAVPVPEPRDAIDSEATR
SIPAVEKPANLQNVSDHEQYDNDEAMDVSRLSTVLVPEPSDVTQEQAELE
SAPLASLMDPPALTTHPTGDTDGIEHKPSVDYPKHIAEDDHAEESHQLPQ
DGSSPITRSSIPPRGMSEDSGDRYHSGDTSGHEEQDLEEHIARTGMRDEH
HEEAPARQIADETRATNPYQSPQQPLSSSSPTRLTALFSLPFAADVRPKP
EDTPHEVAKQLHEAGGLNLESSSSVFRVIRKKPRSPSATTESEDDDESSI
EFVTLRPHTAEVLPWKAREGSEYIDVTNGALAVKPLAAVASRFGTACLNA
SLRIVEPMRMPACRKDFCYISPEYPDGTSLPYVPVNHVILQHQPPTWDKE
ETYGINKVRLSFQKHVFKEVEAIAIKAYQDRYPGANVNCVSRVTSTRVRK
YVEIDEDAKVDVSSFFGKPMRLGVPEALSLIELDIVGLVLLYIGVDAKNN
DGSEAELAFRLHSMVMKRVVSKKKPNM*
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