Gvermi5761.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5761.t1
Unique NameGvermi5761.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length450
Homology
BLAST of Gvermi5761.t1 vs. uniprot
Match: A0A2V3J6I6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I6_9FLOR)

HSP 1 Score: 450 bits (1158), Expect = 6.480e-154
Identity = 216/379 (56.99%), Postives = 288/379 (75.99%), Query Frame = 0
Query:   64 VKRSLTSLSRVLIDEYVTWHRSVVSQVQSGQLDGSSVRTLIYIGNDGGHGLGDRLRGLLLAYFSAVMTDRLLLIYWQNPFPLSNVLVDSFRSNFTYDETYFPSREKENGSPDVKK-VRRATLQDLHFYFGVKGNHTKIMFACEPPPRLEDLFKAVEKFPGLPTSVKLKKILPLEVPVQDEQFFPLIFKALFRPSPELRRMMEDITDNRYRLIPSRIWRRGSLTGIDISDPYISVHSRLGFGLGEFIRRFERQMEGQTMESVAYCMAQKAMKLAEQEGITDPPRFYLACDTLEFRKMLRKAILNINSRSQVKYGTWSIKHVRDMVQRTRIDLKLFMYTFIDLYLLSKGLAILRSDSGFSNLAIWMGALPTQMNFDVETDC 441
            ++ SL +L RVLID YV WH S VS+V+ G+LDGSSVRTL+++GN+G HGLGDRLRG+L AY +AV ++RLLLI+WQ+PFPLS VLV+S  SN+TYD + FPSR KE G  + K  V++ATL ++H + G+   H  ++  CEP P L+D+FKA+ KFP L TS+ +KKILPL       QFFPLIFKAL RPS  LR+MM +I D   R  PSR+W++G L  ID   P+ISVH+RLG+G+ E+I+RF+ QM G+TMESVA CMAQ AM+LA++E +T PPRFYLA DT +FR M + A++ ++ +++V YGTW +KHV++M   T  DL+LF YTF+DLY++SKG AILRS+SGF NLA+WMG +P+QM F++  DC
Sbjct:    1 MQESLQALKRVLIDRYVLWHHSTVSKVREGELDGSSVRTLVFVGNEGRHGLGDRLRGMLFAYLAAVFSNRLLLIHWQDPFPLSTVLVNSVHSNYTYDASLFPSRTKEEGGEEDKVYVKKATLMEMHLFTGI---HRMLVLECEPRPSLDDVFKAMRKFPRLQTSIAMKKILPLRRRPHPNQFFPLIFKALLRPSAALRKMMAEIIDKHNRFAPSRLWKQGPLKRIDTGKPFISVHARLGYGVAEYIKRFKSQMSGRTMESVAECMAQIAMRLAKRENVTHPPRFYLATDTEQFRLMFKTALMRMDRQAKVMYGTWVMKHVKEMQGHTTDDLRLFRYTFMDLYIMSKGEAILRSNSGFPNLAVWMGGIPSQMGFNIN-DC 375          
BLAST of Gvermi5761.t1 vs. uniprot
Match: A0A2V3J6A2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A2_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 4.690e-48
Identity = 123/377 (32.63%), Postives = 194/377 (51.46%), Query Frame = 0
Query:   65 KRSLTSLSRVLIDEYVTWHRSVVSQVQSGQLDGSSVRTLIYIGNDGGHGLGDRLRGLLLAYFSAVMTDRLLLIYWQNPFPLSNVLVDSFRSNFTYDETYFPSREKENGSPDVKKVRRATLQDLHFYFGVKGNHTKIMFACEPPPRLEDLFKAV---EKF---PGLPTSVKLKKILPLEVPVQD--EQFFPLIFKALFRPSPELRRMM--EDITDNRYRLIPSRIWRRGSLTGIDISDPYISVHSRLGFGLGEFIRRFERQMEGQTMESVAYCMAQKAMKLAEQEGITDPPRFYLACDTLEFRKMLRKAILNINSRSQVKYGTWSIKHVRDMVQRTRIDLKL--FMYTFIDLYLLSKGLAILRSDSGFSNLAIWMGAL 429
            K+ +  L R +  +Y+ WHR  +   +       ++  L+Y      +G+GD +RGLL +Y  AV++ R+  I  + PFPLS VL      NFTYD   FP          ++ +R++       YF       K+  A    P L D  + V   E F   P L   +++ K LP         E+  P I KALF PSPELR ++  ++ TDN    + +      +L   +    YISVH+R+G+G  E   RF  + +G T ES+A CMAQ A+++A+Q  +  P  F+++ DT  FR + +  +  +   ++V    W   H+ + V R++   K+  FM T++D+YLLSKG ++L   SGFS++A+WMGA+
Sbjct:   66 KQHMNQLLRAITSDYIDWHRQQLHICEENATHAQTIPKLVYRSMRRNYGVGDVIRGLLHSYLIAVISKRMFFIDVERPFPLSMVLTSPNGYNFTYDRYLFPELSSYE---HIQWLRKS------IYFD------KLDTALSDTPTLVDESQTVLDWELFLIIPRLYPQLEISKKLPQSSGFSPTREEVIPFILKALFCPSPELRSLLPGQENTDNLVWPLSTLFSPDQNLLWRNEMPAYISVHARVGYGFNETEARFNLKNQGLTPESLATCMAQMAVRMADQRRMLHPHHFFISSDTDHFRTLFKTEVNRLRPSAKVYQSNWQAVHM-NRVGRSQSPSKVSDFMNTYVDVYLLSKGKSMLFIRSGFSHVALWMGAI 426          
BLAST of Gvermi5761.t1 vs. uniprot
Match: A0A2V3ILT8_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT8_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 1.850e-14
Identity = 91/356 (25.56%), Postives = 145/356 (40.73%), Query Frame = 0
Query:   75 LIDEYVTWHRSVVSQVQSGQLDGSSVRTLIYIGNDGGHGLGDRLRGLLLAYFSAVMTDRLLLIYWQNPFPLSNVLVDSFRSNFTYDETYFPSREKENGSPDVKKVRRATLQDLHFYFGVKGNHTKI--MFACEPPPRLEDLFKAVEKFPGLPTSVKLKKILPLEVPVQDEQFFPLIFKALFRPSPELRRMMEDITDNRYRLIPSRIWRRGSLTGIDISDPYISVHSRLGFGLGEFIRRFERQMEGQTMESVAYCMAQKAMKLAEQEGITDPPRFYLACDTLEFRKMLRKAILNIN-SRSQVKYGTWSIKHVRDMVQRTRIDLKLFMYTFIDLYLLSKGLAILRSDSGFSNLAIWMG 427
            L++ Y  WHR           +      L+   N+   G+GDR   L+ A+  A  ++R+LL+ W  P+PLS+    S       + T    RE++  +       +   + LH    +   H  I    A   P  L   F      P LP S   K    L   V +       F A+ +P+  L++++E               R+ +L       P+I VH+RLG GLGE   RF     G + E VA C  + A+   +  GI    ++YLA DT+ FR +    +L    + S +++      H +               T ++L +LSK   I+ S S FS +A ++G
Sbjct:  108 LVNRYAKWHRE----------NRRKAPRLVVRFNETNPGVGDRFSTLVSAFIIASFSNRVLLLDWIQPYPLSHFFSPSSAMP-GIEFTDADRREEQQKASSRYICDKQCTKKLHLGHVLGSKHFIIYPQGATTSPQHLVAHFSTTH--PRLPLS---KVFANLTDVVTNVHVLSSAFNAMLKPAAPLKKLLEK--------------RKRAL-----KQPFIGVHARLGAGLGETGPRFG---SGHSPEQVAKCFVKSALGSGDTHGIR---KYYLATDTVPFRDVFENVLLRERPNASLIRFDDIMPVHTKGCKNNASECAS----TMMELIVLSKSSYIVASKSSFSRVAGYIG 418          
BLAST of Gvermi5761.t1 vs. uniprot
Match: A0A7R8WT50_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WT50_9CRUS)

HSP 1 Score: 62.8 bits (151), Expect = 5.470e-7
Identity = 51/198 (25.76%), Postives = 85/198 (42.93%), Query Frame = 0
Query:  111 GHGLGDRLRGLLLAYFSAVMTDRLLLIYWQNPFPLSNVL--VDSFRSNFTYDETYFPSREKENGSPDVKKVRRATL-----QDLHFYFGVKGNHTKIMFACEPPPRLEDLFKAVEKFPGLPTSVKLKKILPLEVPVQDEQFFPLIFKALFRPSPELRRMMEDITDNRYRLIPSRIWRRGSLTGIDISDPYISVHSRLG 301
            G G+GDRLRGL+  +F A+ T+R  LIYW NPF L+ V         N   +E +  +R      P+ K++ + +      ++   +  V+ N+  +    + P  +++LF+  EK                 V +     F + F AL +PS  L +               R+    S  G+    PYI++H R+G
Sbjct:   98 GGGIGDRLRGLVFTFFWAIATNRTFLIYWDNPFNLTEVFQPATDLDWNCNIEEAF--NRSTFFYLPNAKEIAKYSEKFNSGENWPAFTAVQTNYHAMYVPKKYPKPMKELFQR-EK-----------------VSLHSLSLFEIAFNALLKPSKALTQ---------------RLMEMRSAIGLKDQQPYITMHLRMG 260          
BLAST of Gvermi5761.t1 vs. uniprot
Match: A0A7R8WJ50_9CRUS (Glycosyltransferase family 92 protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WJ50_9CRUS)

HSP 1 Score: 62.0 bits (149), Expect = 1.280e-6
Identity = 84/383 (21.93%), Postives = 156/383 (40.73%), Query Frame = 0
Query:   59 KDVHAVKRSLTSLSRVLIDEYVTWHRSVVSQVQSGQLDGSSVRTLIYIG--NDGGHGLGDRLRGLLLAYFSAVMTDRLLLIYWQNPFPLSNVLVDSFRSNFTYD-------ETYFPSREKENGSPDVKKVRRATLQDLHFYFGVKGNHTKIMFACEPPPRLEDLFKAVEKFPGLPTSVKLKKILPLEVPVQDEQFFPLIFKALFRPSPELRRMMEDITDNRYRLIPSRIWRRGSLTGIDISDPYISVHSRLGFGLGEFIRRFERQMEGQTMESVAYCMAQKAMKLAEQEGITDP--PRFYLACD--TLEFRKMLRKAILNINSRSQVKYGTWSIKHV-RDMVQRTRIDLKLFMYTFIDLYLLSKGLAILRSDSGFSNLAIWMG 427
            KD HA  ++  +     I +Y+ +H++  ++  +        + +I+    N  G G+GDRLRGL+  +F A+ T+R  LIYW NPF L+ V   +   ++  +        T+F     +  S   KK   ++ ++   +  V+ N+  +    + P  +++LF+  EK                   +     F + F AL +PS  L   + +I              R ++   D   PYI++H R+G   G        +   + +  +  C  +     +E+ GI     P  +L     T +F       I  ++S          I H+ R +  R     + ++  + +  L+ +   I++S SGFS +A  MG
Sbjct:   26 KDSHAKLKNTVNELPNFIRDYMAFHKASCNKPVAEN------KYMIFTEKHNLEGGGIGDRLRGLVFTFFWAIATNRTFLIYWDNPFNLTEVFQPATDLDWNCNAEEAFNRSTFFYMNGFKKNSKYTKKW--SSDENWPAFTAVQTNYYAMYVPKKYPQPMKELFQR-EK-----------------ASLHSLSLFEIAFNALLKPSKALTHRLMEI--------------RSAIGLKDPQQPYITMHFRMGKA-GNVSWNDPARNSPEDIPKILKCGRKLQRDYSEKFGIAQEQLPLVFLTDSQATKQFVAAQNPDIRTVDSE---------IIHIDRYVNNREAAPKQGYIDAWAEFLLIRESRCIVKSVSGFSIVASMMG 358          
The following BLAST results are available for this feature:
BLAST of Gvermi5761.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J6I6_9FLOR6.480e-15456.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6A2_9FLOR4.690e-4832.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT8_9FLOR1.850e-1425.56Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A7R8WT50_9CRUS5.470e-725.76Hypothetical protein n=1 Tax=Cyprideis torosa TaxI... [more]
A0A7R8WJ50_9CRUS1.280e-621.93Glycosyltransferase family 92 protein n=1 Tax=Cypr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 288..444
e-value: 5.5E-7
score: 31.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..449
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..30
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:1504127..1505476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5761.t1Gvermi5761.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 1504127..1505476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5761.t1 ID=Gvermi5761.t1|Name=Gvermi5761.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=450bp
MFRFSASRMFSYFLIFGILAILFVQPSIFSIKTEPSAHFFFEHASPELLS
RRYNRFSQKDVHAVKRSLTSLSRVLIDEYVTWHRSVVSQVQSGQLDGSSV
RTLIYIGNDGGHGLGDRLRGLLLAYFSAVMTDRLLLIYWQNPFPLSNVLV
DSFRSNFTYDETYFPSREKENGSPDVKKVRRATLQDLHFYFGVKGNHTKI
MFACEPPPRLEDLFKAVEKFPGLPTSVKLKKILPLEVPVQDEQFFPLIFK
ALFRPSPELRRMMEDITDNRYRLIPSRIWRRGSLTGIDISDPYISVHSRL
GFGLGEFIRRFERQMEGQTMESVAYCMAQKAMKLAEQEGITDPPRFYLAC
DTLEFRKMLRKAILNINSRSQVKYGTWSIKHVRDMVQRTRIDLKLFMYTF
IDLYLLSKGLAILRSDSGFSNLAIWMGALPTQMNFDVETDCSFDTTPSH*
back to top