Gvermi5703.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5703.t1
Unique NameGvermi5703.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length222
Homology
BLAST of Gvermi5703.t1 vs. uniprot
Match: A0A2V3IYB9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB9_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 4.120e-81
Identity = 138/227 (60.79%), Postives = 170/227 (74.89%), Query Frame = 0
Query:    1 MNSLSGAKRARSD-GEVISVCARSPFASP--APHLHRVHKRARRLSDPRA--SDLLALLRSDRDAQRRFPARAAFLASLNAPDALVLGMLPALGGDTAALLSIIDLNSFQHNILALMNDYARRGVSMTTLNIRGHSFCPADKHMVLTSFASAYGHHRVACALLQYVAHTLFRSHRTMSINMLSGGGVRDVLIAEWCNMYNLKTRRTPPQLIFVHCDA-RVFLLPVVV 221
            MN+L G KR+R+D GEVIS+ A + FA P  A H HRV KRARRL + RA  S L ALLRSD  A RR+ AR AFL +L AP+ ++LGM   L  D AALLSI+DLN+ Q +I+A++ND A R VSMT LN+RGH+FC ADK  VLTSF SAYGHHRVAC L+ YVAH +F  +  M+I++LSGGGVRDVLIA+WC  + LKTR TPP LI + C++ R+FL+PVVV
Sbjct:    1 MNALRGVKRSRADAGEVISLVAPAQFAHPHAATHHHRVFKRARRLQELRAPTSQLSALLRSDPHASRRYQARVAFLRTLAAPEPVLLGMCHLLQSDAAALLSIVDLNTHQSSIMAVLNDCAARAVSMTALNVRGHAFCMADKRPVLTSFTSAYGHHRVACELVHYVAHRVFAGYSRMAISVLSGGGVRDVLIADWCAQHKLKTRVTPPHLIILRCESQRLFLIPVVV 227          
BLAST of Gvermi5703.t1 vs. uniprot
Match: A0A1X6P169_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P169_PORUM)

HSP 1 Score: 96.3 bits (238), Expect = 9.700e-21
Identity = 72/204 (35.29%), Postives = 98/204 (48.04%), Query Frame = 0
Query:   26 ASPAPHLHRVHKRARRLSDPRAS--DLLALLRSDRDAQRRFPARAAFLASLNAPDALVLGMLPALGGDTAALLSIIDLNSFQHNILALMNDYARRGVSMTTLNIRGHSFCPADKHMVLTSFASAYGHHRV-ACALLQYVAHTLFRSHRTMSINMLSGGGVRDVLIAEWCNMYNLK------TRRTPPQLIFVH--CDARVFLLP 218
            A  AP      KRARR +       D+ A L S      R PAR A LA     +A V  +   LGGDT ALL ++D N++   +L ++ D +  G  +T LN+R HS+       V+T FA   G  R  A  ++++V  + F    T+ I  L GGGVRDVL+ EW   Y  +      TR   P L+ V      R FL+P
Sbjct:   28 APVAPVARVAIKRARRPTCRTTGCVDVRAALGSGLGGFERLPARLATLADHGLSEASVTALYSGLGGDTDALLRLVDGNTYAAGVLGVLRDVSSSGKPLTDLNVRAHSWSVGPAASVVTEFARRAGADRAWAVGVVRWVVASAFAGEATVGITALEGGGVRDVLLREWWRTYGPRMGGVAGTRPPLPVLLIVTGGTSGRSFLVP 231          
The following BLAST results are available for this feature:
BLAST of Gvermi5703.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYB9_9FLOR4.120e-8160.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P169_PORUM9.700e-2135.29Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:1150264..1150929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5703.t1Gvermi5703.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 1150264..1150929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5703.t1 ID=Gvermi5703.t1|Name=Gvermi5703.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=222bp
MNSLSGAKRARSDGEVISVCARSPFASPAPHLHRVHKRARRLSDPRASDL
LALLRSDRDAQRRFPARAAFLASLNAPDALVLGMLPALGGDTAALLSIID
LNSFQHNILALMNDYARRGVSMTTLNIRGHSFCPADKHMVLTSFASAYGH
HRVACALLQYVAHTLFRSHRTMSINMLSGGGVRDVLIAEWCNMYNLKTRR
TPPQLIFVHCDARVFLLPVVV*
back to top