Gvermi5575.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi5575.t1
Unique Name	Gvermi5575.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	410

Homology

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BLAST of Gvermi5575.t1 vs. uniprot
Match: A0A2V3IXB0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXB0_9FLOR)

HSP 1 Score: 496 bits (1277), Expect = 3.270e-173
Identity = 238/345 (68.99%), Postives = 274/345 (79.42%), Query Frame = 0

Query:   65 MFAASQLSTNPYGFSARVKYCKIQKPFRPSIPSRESPGLKSTCPKFVSEATEYHSMGSCSKPNYWRTQRKKTLNKLDALFLKNTKPQTVSAFKKFAATLFSDNVAFGSIGLLMLHGKKKTVDYLVSRQEAAGSLVPWSSKTPGGSRQGLVWARSNLVSYEKTYYKGDSFYARFTFVTFAPCSAKIKALYIAENSLFSAIGSQFYYPDSPDAYNQFNLPASKICDGISKACGTKSPYKSKSECVDFVSKLKKNGKAMCLNYKNARLSTRAAVGNTVACRVTSSLMAVSNPEKYCPLLGKVPGGMCTTDMCPQGDYGNLFAIKNPRYIGSGGFSCNSVTGDCVELWP 409
            MFAAS+L+TN YGFSARV  C I  PFRPSIPSR+SPGLKSTCPK   EA E    G C  P YWRTQR+KTL KLD + L+N   +T++AF+ +  T+  DNVAFGSIGL M HGK+KTVDYLVSRQ AAGS VPWSS   G  R G +W+RSNLVSYEK+Y+ GD + + F FVTFAPCSAKI+ LYIAENSLFSA+GSQ+YYPD PDAY+QFN+PA+ IC  I  ACG KSPYKSKSECV F+  L+K+GKAMC+NY   RLS RAAVGNTVACR+T+SLMA+SNP KYCPLLGK PGGMCT  MCP  DYGNLFA+KNPRY G+G FSCN  +G+C ELWP
Sbjct:    1 MFAASRLATNSYGFSARVSACNITTPFRPSIPSRDSPGLKSTCPKVGWEAMEKGPNGVCKAPKYWRTQREKTLKKLDTMHLQNANRKTINAFRNWVGTMLVDNVAFGSIGLFMTHGKEKTVDYLVSRQAAAGSFVPWSSIRKG-RRNGFMWSRSNLVSYEKSYFVGDHYLSLFMFVTFAPCSAKIEELYIAENSLFSALGSQYYYPDYPDAYSQFNIPAADICGRIEVACGNKSPYKSKSECVAFMKNLRKSGKAMCINYNRGRLSPRAAVGNTVACRITTSLMAMSNPNKYCPLLGKAPGGMCTNKMCPVPDYGNLFAVKNPRYEGTGDFSCNLKSGECKELWP 344

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BLAST of Gvermi5575.t1 vs. uniprot
Match: R7QT93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT93_CHOCR)

HSP 1 Score: 159 bits (402), Expect = 2.810e-43
Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 0

Query:  214 VWARSNLVSYEKTYYKGDSF-YARFTFVTFAPCSAKIKALYIAENSLFSAIGSQFYYP-DSPDAYNQFNLPASKICDGISKACGTKSPYKSKSECVDFVSKLKKNGKAMCLNYKNARLSTRAAVGNTVACRVTSSLMAVSNPEKYCPLLGKVPGGMCTTDMCPQGDYGNLFAIKNPRYIGSGGFSCNSVTGDCVELW 408
            V+ R + VSYE+++   ++    R+ FV F PCS KI   Y  E  + +   +QFYYP D P+A   ++    ++C  I+  CG  SPY S  EC +FV++LK+  + MC        S     G+TVACR + +L A ++PE+YCP +GK   G+C    C   +Y N+FA +NPR+ GS  FSCN +TG+CVE W
Sbjct:    4 VFWRESTVSYERSFSSTNAATQTRYMFVGFEPCSNKILDAYAVEEGVINYFATQFYYPPDIPNAVTMYDRTPEEVCSRIATGCGALSPYASDRECQEFVAELKREKQVMCAKLGEEESSVVGLAGDTVACRYSYALAAEADPERYCPFVGKAAMGLCVDSACGA-EYDNVFAYQNPRFGGSNSFSCNKLTGECVENW 199

The following BLAST results are available for this feature:

BLAST of Gvermi5575.t1 vs. uniprot

BLAST of Gvermi5575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IXB0_9FLOR	3.270e-173	68.99	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QT93_CHOCR	2.810e-43	40.10	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..409
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_776	contig	ScGOVlb_776:619256..620485 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi5575.t1	Gvermi5575.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_776 619256..620485 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi5575.t1 ID=Gvermi5575.t1|Name=Gvermi5575.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=410bp
MIRSSFILFLFLCVSPALGSPMNCGPPLSKLLKACGQHDKANPDFCCEAL
REFNGKQCWCQPSAMFAASQLSTNPYGFSARVKYCKIQKPFRPSIPSRES
PGLKSTCPKFVSEATEYHSMGSCSKPNYWRTQRKKTLNKLDALFLKNTKP
QTVSAFKKFAATLFSDNVAFGSIGLLMLHGKKKTVDYLVSRQEAAGSLVP
WSSKTPGGSRQGLVWARSNLVSYEKTYYKGDSFYARFTFVTFAPCSAKIK
ALYIAENSLFSAIGSQFYYPDSPDAYNQFNLPASKICDGISKACGTKSPY
KSKSECVDFVSKLKKNGKAMCLNYKNARLSTRAAVGNTVACRVTSSLMAV
SNPEKYCPLLGKVPGGMCTTDMCPQGDYGNLFAIKNPRYIGSGGFSCNSV
TGDCVELWP*