Gvermi5555.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi5555.t1
Unique NameGvermi5555.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length237
Homology
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BLAST of Gvermi5555.t1 vs. uniprot
Match: A0A2V3ISD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISD1_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 1.650e-66
Identity = 103/131 (78.63%), Postives = 117/131 (89.31%), Query Frame = 0 
Query:  104 MNRLRALVVPDHDANMALLHLNPLLFALVDSLLKDADLLAKHAIKRPRAVLLVNVYGICYFFWTVFCTRFNGGHWPYPFQHRFSPVQHLIFVAFSLTCATYLTRTGFRLHARLDRRRRRRHALADKDRSSR 234
            MNRLRA +VPDHD+ MALLHLNPLLFAL DSLLKDADLLAK+AIK+ RAVLLV+ YG+ YFFWT+FCTRFNGGHWPYPFQ  FSPVQHL+F+A S++CA YLTR GFR H RLDRRRRRR ALA+K+RS+R
Sbjct:    1 MNRLRAHMVPDHDSKMALLHLNPLLFALGDSLLKDADLLAKYAIKQSRAVLLVSAYGVMYFFWTLFCTRFNGGHWPYPFQMAFSPVQHLMFMALSVSCAIYLTRAGFRFHGRLDRRRRRRLALAEKERSAR 131
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BLAST of Gvermi5555.t1 vs. uniprot
Match: A0A5J4Z4S3_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4S3_PORPP)

HSP 1 Score: 67.8 bits (164), Expect = 1.430e-9
Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 0 
Query:    9 AQYVQLIMLKAPGRTPLPAA--VAFGRDSVFLTFHANFHCTWYACLCLMNAVLQLGRRARSRPARAVETVVHRVTTVLFPLAAFVGLAYYLILHFHPMNRLRALVVPDHDANMALLHLNPLLFALVDSLLKD 138
            A ++++ + +     P P A    FG   VFLT   N   T Y  LC++           +R A+ +  V+H  + V F L   +G  YY ++HF P  RLRA  +   D +M LLH  PLLF ++D+LLK+
Sbjct:   76 ALFLKITVAQIQFHPPRPDAPDTVFGGRLVFLTVQTNLILTAYVTLCVLECAA-----VSTRAAKMIRWVLHVSSGVAFALGFCMGSLYYTLIHFDPHTRLRAAEIDQFDYHMHLLHGAPLLFVILDALLKE 202
The following BLAST results are available for this feature:
BLAST of Gvermi5555.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISD1_9FLOR1.650e-6678.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z4S3_PORPP1.430e-934.09Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006838FAR-17a/AIG1-like proteinPFAMPF04750Far-17a_AIG1coord: 26..213
e-value: 1.0E-14
score: 54.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..236
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..151
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 119..136
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 80..99
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_776contigScGOVlb_776:473276..473986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi5555.t1Gvermi5555.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_776 473276..473986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi5555.t1 ID=Gvermi5555.t1|Name=Gvermi5555.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=237bp
LAAPNFLYAQYVQLIMLKAPGRTPLPAAVAFGRDSVFLTFHANFHCTWYA
CLCLMNAVLQLGRRARSRPARAVETVVHRVTTVLFPLAAFVGLAYYLILH
FHPMNRLRALVVPDHDANMALLHLNPLLFALVDSLLKDADLLAKHAIKRP
RAVLLVNVYGICYFFWTVFCTRFNGGHWPYPFQHRFSPVQHLIFVAFSLT
CATYLTRTGFRLHARLDRRRRRRHALADKDRSSRRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006838Far-17a_AIG1