Gvermi5582.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi5582.t1 vs. uniprot
Match: A0A2V3IYE9_9FLOR (Regulator of nonsense transcripts UPF3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYE9_9FLOR) HSP 1 Score: 380 bits (976), Expect = 6.270e-126 Identity = 242/442 (54.75%), Postives = 294/442 (66.52%), Query Frame = 0
Query: 1 MDRAAARRGRAAGDRPGAARPXXXXXXXXXXXXXXXXXXXXAAARLRPRXXXXXXXXXKPPAPSIAVKLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTIENDPDYIKFLAELKGDAEREQSELAATLTSASTIVGRPTAIEKDNSPPRGQVVTPLMEDVRARRRERXXXXXXXXXXRGXXXXXXXXXPPPPLTPLS-NKANDSAEAIKLGARRKKRRGADNASASKRDQPAQDRKSPKFPSNDRRNGQLRP----ADSSVSASAPPNPTSSSPYANSTASVSNASNGKGNSSRXXXXXXXXXXXXXXXXXXXXXXXXXTVGVAARTENQNSDPLHGPVRVLRKEASVTNKT 437
MDRA+ARRGRA G RP P A+ R PR XXXXXX PS+A+K++VRRLPPTLTAE+F +HA P GADKA+W AYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDA+HFF +FD FKFV+ KT+DSSLQSGTDY+ARVERAM+Q TP +T RR P +EGTIE+DPDY+ FLAE+KGDAEREQSELAA T+ S++V R T EK++ +G V+TPL+EDVRARR+ER RG PPP + K +S E +KLGA+RKKRR DN +ASKRD Q+RK K +N+RRNGQ+R A +S SA+A P SS P+AN+ A+++ S KG S+RXXXX T+G + E +SD +HGPVRVL+KEASVT+KT
Sbjct: 1 MDRASARRGRAPGGRPRRRPPRPSHPQQ-------------ASPRSHPRSKNXXXXXXX--XPSVAIKIVVRRLPPTLTAEQFRTHANPKGADKALWNAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDATHFFNEFDGFKFVDPGKTIDSSLQSGTDYFARVERAMFQTTPLLTRRRAPPAIEGTIESDPDYLNFLAEMKGDAEREQSELAANQTAGSSVVSRHTTTEKEDRASKGLVLTPLIEDVRARRKERDERKKAKSTVRGSRGKGRGSTAPPPAAISAVPKVVESVENVKLGAKRKKRRAGDNKNASKRDDAVQERKGSKSGANERRNGQIRQTGPNAGNSTSANANKAPPSS-PFANNNAAMNGGSGSKGGSTRXXXXGRSRYSRGQKGRGRYAQNGNGTIG--GKHEAGSSDSVHGPVRVLKKEASVTHKT 424
BLAST of Gvermi5582.t1 vs. uniprot
Match: R7QSJ8_CHOCR (Smg4_UPF3 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSJ8_CHOCR) HSP 1 Score: 148 bits (374), Expect = 3.540e-36 Identity = 94/223 (42.15%), Postives = 125/223 (56.05%), Query Frame = 0
Query: 62 APSIAVKLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAV-GAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTIENDPDYIKFLAELKGDAEREQSELAA--------------------------TLTSASTIVGRPTAIEKDNSPPRGQVVTPLMEDVRARRRER 257
AP++AVKL+VRRLPPTLTA++F+ A P GA +A+W ++ PG A G VKR V RH+ AYLAF ++DA F Q F+ KF + S D+ ARVERA +Q PP+T +P PL GTIE DPDY+ F+A L+ + ++E S A T S ST G+ A+ + S ++ TPLMEDVRARR+ER
Sbjct: 93 APTVAVKLVVRRLPPTLTADKFAEIADPAGASRAVWRSFAPGSASAASGPVKRLRLVTRHATAYLAFVNMDDAVAFTQTFNGIKFQDPNAPPSSQ---NHDFIARVERAPWQPVPPLTKITKPLPLHGTIERDPDYMAFVARLEDETKKELSGANALTVAQTSAIFSRGPGSNPSDTQKRDNTSASVSTSTGKAGALAVNGS----ELSTPLMEDVRARRKER 308
BLAST of Gvermi5582.t1 vs. uniprot
Match: A0A7S1XA88_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XA88_9RHOD) HSP 1 Score: 87.4 bits (215), Expect = 6.050e-15 Identity = 69/199 (34.67%), Postives = 104/199 (52.26%), Query Frame = 0
Query: 67 VKLIVRRLPPTLTAEEFSSHAAPNGADKA------IWTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTIENDPDYIKFLAELKGDAEREQSELAATLTSASTIVGRPTAIEKDNSPPRGQ--VVTPLMEDVRARRRER 257
VKLIVR+LPP LT EE + D IWT + GK+ + ++ +RHSV Y+AF+ ++AS F F++ F++ ++G Y A VERA Q P +++ PL+GTIE+D DY +FL + AE E + + +V + S RG+ +VTPL+E++RA+RRER
Sbjct: 131 VKLIVRKLPPCLTVEEIQASMDRVAIDAGEPHFLPIWTRFRSGKLA------KPSRAMRHSVLYVAFKDHKEASRFANLFNSHCFLDG--------KNGMCYNAVVERAPNQQIP--RAQKSKDPLQGTIESDTDYKRFLTKY---AEAESRPIGPLQGTGGLLVTT-EMVASTTSATRGRDIIVTPLVEELRAKRRER 309
BLAST of Gvermi5582.t1 vs. uniprot
Match: UPI000D1C37A9 (regulator of nonsense transcripts UPF3 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C37A9) HSP 1 Score: 76.6 bits (187), Expect = 1.940e-11 Identity = 64/192 (33.33%), Postives = 86/192 (44.79%), Query Frame = 0
Query: 63 PSIAVKLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTIENDPDYIKFLAELKGDAEREQSELAATLTSASTIVGRPTAIEKDNSPPRGQVVTPLMEDVRARR 254
P K++VRRLPPTL+ + S A +W + PGK + HS AY+ FE+ ED F + F FV + G+ Y A VE A YQ P + ++ EG+I DPDY++F+ L AE L SA + RP S G +VTPLME VR +R
Sbjct: 43 PLSRTKVVVRRLPPTLSEDALVSRIQTRFARPYLWMLFRPGKSTHRNQI--------HSRAYIEFERPEDVLAFHEDFHGHVFVN---------EKGSQYKAMVEYAPYQRVPDLRVKKDGR--EGSILRDPDYLEFVDTLGKAAE--------LLPSADVQLERP------GSSREGVIVTPLMEYVRQKR 201
BLAST of Gvermi5582.t1 vs. uniprot
Match: UPI001E1DF4ED (regulator of nonsense transcripts 3A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DF4ED) HSP 1 Score: 74.7 bits (182), Expect = 1.060e-10 Identity = 62/192 (32.29%), Postives = 92/192 (47.92%), Query Frame = 0
Query: 68 KLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTIENDPDYIKFLAELKGDAEREQSELAATLTSASTIVGRPTAIEKDNSPPRG--QVVTPLMEDVRARRRER 257
K++VRRLPP+LT E F +P + +Y K + S S AY+ F+ ED ++F +FD + FV+ G +Y A VE A +Q P R+P +GTIE DPDY+KFL L E + S T + + A E++ +G +V TPL+E ++ RR E+
Sbjct: 24 KVVVRRLPPSLTGETFLEQVSPLPN----YDFFYFMKADL------SLGASAFSRAYINFQNYEDIANFRDKFDGYIFVD---------AKGNEYPAIVEFATFQKVPK-KKMRKPDSKKGTIEQDPDYVKFLDSLTNPETEE-------VVSLDTYLEQLEAKEREAKATKGGPKVTTPLIEFIKKRREEK 188
BLAST of Gvermi5582.t1 vs. uniprot
Match: UPI001ED887A9 (regulator of nonsense transcripts 3B isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED887A9) HSP 1 Score: 72.0 bits (175), Expect = 9.210e-10 Identity = 58/197 (29.44%), Postives = 100/197 (50.76%), Query Frame = 0
Query: 68 KLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAVGAVKRSAQVVRHS--VAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTIENDPDYIKFLAELKGDAERE-QSELAATLTSASTIVGRPTAIEKDNSPPRGQ----VVTPLMEDVRARRRER 257
K+++RRLPPT+T E+F +P + ++ A K A + +HS AY+ F + +D F ++FD + F++N G ++ A VE A +Q P SR Q P GTI++DPDY+ F+A++K E + + +T +S ++ +E+ + R + TPL+E ++ R+ ER
Sbjct: 45 KVVIRRLPPTMTLEKFIDQVSPLPENDYLYFA------------KADASLGQHSFCTAYVNFVQPKDVFIFKEKFDDYIFIDN---------KGNEFPAVVEFAPFQKIPRKKSR-QRDPKCGTIDSDPDYLSFVAQVKQTVEEAPDAGIKSTCGKSSPLLSVQDVLEEIEAKERDRKCRKATTPLIEYIKQRKMER 219
BLAST of Gvermi5582.t1 vs. uniprot
Match: A0A4S4KIG3_9AGAM (Smg4_UPF3 domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KIG3_9AGAM) HSP 1 Score: 68.6 bits (166), Expect = 1.070e-9 Identity = 47/138 (34.06%), Postives = 69/138 (50.00%), Query Frame = 0
Query: 67 VKLIVRRLPPTLTAEEFSSHAAPNGADKAI-WTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTIENDPDYIKFLAEL 203
+K +VRRLPP L + F P +++ + W +YPGK+ K+ + S AY+AF + + F Q +D F + A G + YA VE A +Q PP +R+P P TIE D D+I F+A L
Sbjct: 44 LKTVVRRLPPNLPEDVFWQSVQPWVSEETVSWKMFYPGKIR-----KKYNKENLPSRAYIAFRSADQLAVFSQAYDGHTFRDKA---------GNESYAVVEFAPHQKVPP--EKRKPDPRNDTIEQDEDFISFIASL 165
BLAST of Gvermi5582.t1 vs. uniprot
Match: A0A6A1VFC1_9ROSI (Regulator of nonsense transcripts UPF3 n=2 Tax=Morella rubra TaxID=262757 RepID=A0A6A1VFC1_9ROSI) HSP 1 Score: 70.9 bits (172), Expect = 1.970e-9 Identity = 61/188 (32.45%), Postives = 90/188 (47.87%), Query Frame = 0
Query: 68 KLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLEGTI-ENDPDYIKFLAELKGDAEREQSELAATLTSASTIVGRPTAIEKDNSPPRGQVVTPLMEDVRARR 254
K+++RRLPP+LT + A + W ++ PGK+ S + R+S AY+ F++ ED F + FD FV + G Y VE A P +++++ EGTI + DPDY++FL + AE L SA + R A E+ SP +VTPLME VR +R
Sbjct: 9 KVVIRRLPPSLTKSDLFLQIEEKFAGRYNWFSFRPGKI--------SQKHQRNSRAYIDFKRPEDVFEFAEFFDGHVFVN---------EKGAQYKIAVEYAPSPRVPKLSTKKDVR--EGTIYKEDPDYMEFLKIIAKPAEH--------LPSAEIQLERREA-EQAGSPKETLIVTPLMEYVRQKR 168
BLAST of Gvermi5582.t1 vs. uniprot
Match: A0A6J8EY75_MYTCO (UPF3 n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EY75_MYTCO) HSP 1 Score: 70.5 bits (171), Expect = 2.410e-9 Identity = 60/194 (30.93%), Postives = 94/194 (48.45%), Query Frame = 0
Query: 68 KLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLE---GTIENDPDYIKFLAELKGDAEREQSELAATLTSASTIVGRPTAIEKDNSPPRG-QVVTPLMEDVRARRRER 257
K+++RRLPP+LT E +P + + + V A ++ ++A + AY+ F+ ED +F QFD + FV+ G +Y A VE A YQ P RR+P ++ G+IE DPDY+KFL L+ + E + A L EKD + +V TPL++ +R +R E+
Sbjct: 23 KVLIRRLPPSLTPETLLEQLSPLPSHEFYF-------VRADMSLGQNA----FTRAYINFQSYEDVYNFRDQFDGYVFVDG---------KGNEYSAIVELAPYQKVP----RRKPKKVDVKMGSIEQDPDYVKFLEYLQNEEAEETQTIEAYLEELENK-------EKDMKAKKSMKVTTPLIDYIRKKREEK 185
BLAST of Gvermi5582.t1 vs. uniprot
Match: A0A8B6BKY6_MYTGA (Regulator of nonsense transcripts 3 n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BKY6_MYTGA) HSP 1 Score: 69.3 bits (168), Expect = 7.580e-9 Identity = 60/194 (30.93%), Postives = 94/194 (48.45%), Query Frame = 0
Query: 68 KLIVRRLPPTLTAEEFSSHAAPNGADKAIWTAYYPGKVEAVGAVKRSAQVVRHSVAYLAFEKLEDASHFFQQFDAFKFVENAKTVDSSLQSGTDYYARVERAMYQATPPITSRRQPSPLE---GTIENDPDYIKFLAELKGDAEREQSELAATLTSASTIVGRPTAIEKDNSPPRG-QVVTPLMEDVRARRRER 257
K+++RRLPP+LT E +P + + + V A ++ ++A + AY+ F+ ED +F QFD + FV+ G +Y A VE A YQ P RR+P ++ G+IE DPDY+KFL L+ + E + A L EKD + +V TPL++ +R +R E+
Sbjct: 512 KVLIRRLPPSLTPETLLEQLSPLPSHEFYF-------VRADMSLGQNA----FTRAYINFQSYEDVYNFRDQFDGYVFVDG---------KGNEYSAIVELAPYQKVP----RRKPKKVDVKMGSIEQDPDYVKFLEYLQNEEAEETQTIEAYLEELELK-------EKDMKAKKSMKVSTPLIDYIRKKREEK 674 The following BLAST results are available for this feature:
BLAST of Gvermi5582.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi5582.t1 ID=Gvermi5582.t1|Name=Gvermi5582.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=438bpback to top |