Gvermi7616.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi7616.t1
Unique Name	Gvermi7616.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	445

Homology

[Close]

BLAST of Gvermi7616.t1 vs. uniprot
Match: A0A2V3IP66_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 4.350e-30
Identity = 94/292 (32.19%), Postives = 142/292 (48.63%), Query Frame = 0

Query:  147 SCSKVPDFVLDERVLTGQCSQRSLCRARILVHKEKGQVVIKAGYYIYTVDGKHRTVDSETISKIGNTSSKKVLSWAKSLIAGLGTKLDDVNCPVTVEMIVQSITDSMKSVVACPRTGDPLCEALLPVKKCTCSSFTGGTEEENACLEFIRSNPDIQSLADLHEGCHNAVFIYQR----VNVSLPICETTCASNPMIKHRVFMEFWVQSDTRVEHVEDCISAALIPAYNTLYSS--IPSCDDIQGEVMYGPSFLYLVAGSYE--------GNIPEKAVQIAKNHGCALTFVFF 424
            SC  + D +LDER+ T  C+   +CRAR++++KE+G+V I+AGY I+    K   VD  T  ++  T+ K+   WA  L++ +   + ++ C V V MI  +I  S   VV CPRT  PLC  L  +K CT       TEE+ AC EF+++     SL  L  G   A    Q     ++VS+P C TTC ++   K    M   +          D I++   P Y+T+  S  +P C+   G      S +  VA S           ++P K + + + +G  L FVFF
Sbjct:  130 SCG-IGDVMLDERIGTRDCAVGRICRARLVLNKEEGEVTIRAGYNIFP-KRKDIGVDRTTKRRVKATTRKEATKWATVLLSKIQEDMKELGCDVNVSMIADAIMKSKDDVVRCPRTDSPLCTPLETIKTCTVLDERFETEEQRACQEFMKTGTTDISLDYLSTGSPCAGNFQQWDSPCLSVSVPFCTTTCQNSSCPKQERVMFAPLSVCASNYGNGDGIASIFTPVYSTIIGSWPLPPCEVFLGREELDHSGILPVATSSADKPAPIQISSLPGKLLSLIEGYGLQLRFVFF 419

The following BLAST results are available for this feature:

BLAST of Gvermi7616.t1 vs. uniprot

BLAST of Gvermi7616.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IP66_9FLOR	4.350e-30	32.19	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..62
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..41
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 63..444
None	No IPR available	TMHMM	TMhelix		coord: 40..62

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_64	contig	ScGOVlb_64:543320..544654 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi7616.t1	Gvermi7616.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_64 543320..544654 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi7616.t1 ID=Gvermi7616.t1|Name=Gvermi7616.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=445bp
MNTDINFVNAHYQSIPAAQDSGFSFNHEENKKMYHNFNLVGLFRGLKTFA
VTALVVAISMIVTRKLSVSLHSNHFRKFRMASKLSESFNFDSHRHFDNRQ
YMKPFRVLNSISGLRVRSNQPPVDITTLGSQGNLKPFPDMFVRKERSCSK
VPDFVLDERVLTGQCSQRSLCRARILVHKEKGQVVIKAGYYIYTVDGKHR
TVDSETISKIGNTSSKKVLSWAKSLIAGLGTKLDDVNCPVTVEMIVQSIT
DSMKSVVACPRTGDPLCEALLPVKKCTCSSFTGGTEEENACLEFIRSNPD
IQSLADLHEGCHNAVFIYQRVNVSLPICETTCASNPMIKHRVFMEFWVQS
DTRVEHVEDCISAALIPAYNTLYSSIPSCDDIQGEVMYGPSFLYLVAGSY
EGNIPEKAVQIAKNHGCALTFVFFEEKGFDSFQDIVDESCNLSL*