Gvermi7713.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7713.t1
Unique NameGvermi7713.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length162
Homology
BLAST of Gvermi7713.t1 vs. uniprot
Match: A0A2V3IG74_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG74_9FLOR)

HSP 1 Score: 144 bits (362), Expect = 3.090e-37
Identity = 81/155 (52.26%), Postives = 108/155 (69.68%), Query Frame = 0
Query:    8 LLYFVVFICHASAASKLHHGALSNGSPTILRGRTLIDAVLDEGGLTEGISAGSAFKPS-SLQSLSVSTRRVLEFAVELKQDSDLFEELVEEGVQVESCSRDASARTATIRLRGASLKLSDSEKGTAFVIDVDEWENNCAPVLPVEGIDEADDALF 161
            LL+ ++ + HASA S+LH  +   GSPT+LRGRTLI   LD  GL     + +AF  + +  SL  S  R+LEF+V LK++S +++EL E+GVQ+ SC+RDA +R ATI+L G +L  SD   GTAFVIDVD+WE +C  V PVEG+DEADD LF
Sbjct:   10 LLWALLLVSHASA-SRLHRVSSVTGSPTVLRGRTLISGSLD--GLKANAFSANAFGATPNAASLVASNPRLLEFSVSLKKNSVVYDELEEDGVQITSCTRDAGSRQATIKLSGDNLDSSDFASGTAFVIDVDDWEKHCGQVQPVEGVDEADDVLF 161          
BLAST of Gvermi7713.t1 vs. uniprot
Match: A0A2V3J3K5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3K5_9FLOR)

HSP 1 Score: 143 bits (360), Expect = 4.760e-37
Identity = 79/143 (55.24%), Postives = 100/143 (69.93%), Query Frame = 0
Query:   19 SAASKLHHGALSNGSPTILRGRTLIDAVLDEGGLTEGISAGSAFKPSSLQSLSVSTRRVLEFAVELKQDSDLFEELVEEGVQVESCSRDASARTATIRLRGASLKLSDSEKGTAFVIDVDEWENNCAPVLPVEGIDEADDALF 161
            ++AS+LH  + ++GSPTILRGRTLI A  D      G+        S+  SL VS+ R+LEF+V LK D+ +F+EL E+G+Q+ SCSRDA AR AT  L G+ L  SD   GTAFVIDVD+WE +CA V PVEG+DEADDALF
Sbjct:   20 ASASRLHRVSSASGSPTILRGRTLISAAPD------GVET-----TSNTASLVVSSPRLLEFSVALKTDAVVFDELAEDGIQITSCSRDAVARKATAELSGSKLDASDFAPGTAFVIDVDDWEKHCAEVQPVEGVDEADDALF 151          
BLAST of Gvermi7713.t1 vs. uniprot
Match: A0A2V3IUH9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH9_9FLOR)

HSP 1 Score: 132 bits (333), Expect = 2.910e-33
Identity = 70/150 (46.67%), Postives = 105/150 (70.00%), Query Frame = 0
Query:   12 VVFICHASAASKLHHGALSNGSPTILRGRTLIDAVLDEGGLTEGISAGSAFKPSSLQSLSVSTRRVLEFAVELKQDSDLFEELVEEGVQVESCSRDASARTATIRLRGASLKLSDSEKGTAFVIDVDEWENNCAPVLPVEGIDEADDALF 161
            +V +   ++AS++H  + ++GSPT+LRGRTLI        L+   +   A KP++   L+ ST R+LEF+VELK+DS +++EL E+ +++ SC+RDA++R AT++L G +L  +D   G AFVIDVD+WE +C  V PVEG+DEADD LF
Sbjct:    9 LVLLTSEASASRIHRVSGASGSPTVLRGRTLISGSGGSPKLSAFSANSFAGKPNAAPLLA-STPRLLEFSVELKKDSVVYDELEEDNIRITSCTRDAASRKATVQLTGDNLDSADFGTGVAFVIDVDDWEKHCGQVQPVEGVDEADDVLF 157          
The following BLAST results are available for this feature:
BLAST of Gvermi7713.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IG74_9FLOR3.090e-3752.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3K5_9FLOR4.760e-3755.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUH9_9FLOR2.910e-3346.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:3264159..3264644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7713.t1Gvermi7713.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 3264159..3264644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7713.t1 ID=Gvermi7713.t1|Name=Gvermi7713.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=162bp
MSGQLILLLYFVVFICHASAASKLHHGALSNGSPTILRGRTLIDAVLDEG
GLTEGISAGSAFKPSSLQSLSVSTRRVLEFAVELKQDSDLFEELVEEGVQ
VESCSRDASARTATIRLRGASLKLSDSEKGTAFVIDVDEWENNCAPVLPV
EGIDEADDALF*
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