Gvermi7613.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7613.t1
Unique NameGvermi7613.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length574
Homology
BLAST of Gvermi7613.t1 vs. uniprot
Match: A0A2V3J0G4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0G4_9FLOR)

HSP 1 Score: 562 bits (1448), Expect = 1.130e-192
Identity = 298/580 (51.38%), Postives = 400/580 (68.97%), Query Frame = 0
Query:    1 MDTGIQVQFWNVLKYVLLTLILAPVAECAMARVTAWRHAKLVYNGHPIRLKSSWLGNFSLHQEVETLHPSSRLWQVLSIFLALAIALPFEYGSGARSQLIWS-QQRSFSSSLATNSSNDLIFLAHNDPRQ-VECVNPKRLSEVGEFIFMEPTQDKPPFLNGVLTLERVNNLLGDTVHK--WAVLLVHSRNGDKDLQLYAGGKGGQLALLVNPAEKGLLIADFESGALCKGFLDQEFSCYDMAGQFTLSQLTYSIASIRGGTIFLRTSFENAAKLYRFRDKWIFNSIGDPKVQANRLKQRPNETGFQWLSRHRKEN--PFLSISTIELDSQVQSVDCQTSGSVQIRPLILRTGKSLGDDEFGLNISGRGDIILVKGGGKLQTFLLTKAG-DFLCAVDESNAICKSSENQTIYFLDKGEGVFEYTSVFGLQITRDLESPTDLAVLRSLMNSDATYHRNGRAAFWDVQRLVESFAPLDGGARTITRTMDAKVAVSTGARVSGTVETWAVLLYGSTLFLLLLLLCFVRLVPLTGITVEDTYRRVVWQRERGSEPLQTLKTAPKIGFQVGETENSEHLIASYYLI 573
            MDTGI VQ WNVLKY  LTL+LAP+AE AM+R+TAWR+A LV +G PIRLKSS +GN SLHQEVETLH SS L Q+ SI LALAIALPFEY SGA S L WS QQRS SS++AT+  N+LI L+ ++P + +ECVNP RL++VG+F+FM+ T+  PPF++G++TLE V  +L        W  + +HSRNGD  +  Y G +  Q A++ NP  KGLL+ADFE+G+LC G L+  FSCYDMAGQFT+SQL YS+ ++RG ++FLRT FE  AKL+RF+   + NSIGDP V+ N  +QR NE+GF+WL R   E+    LSIST+ LD+Q++S +CQT GSVQIRPL  + G+ L  + F +N+S +GD+ LVK G  L+  LLT+ G D+ CAVD  + +C S  N T YFL K + V+EYT+ F +Q+TR++ES  DLA+L + + SD     NG  A WD+Q L+     L  GARTITR MD  V +S+G RV+GT++ WA++LYG  L   + ++ F +   L  I +E  YRRVV Q+E G + L+   TAP IG +  + +      AS+ ++
Sbjct:    1 MDTGINVQLWNVLKYFGLTLLLAPIAESAMSRITAWRNAYLVNHGKPIRLKSSIMGNISLHQEVETLHVSSTLLQLFSILLALAIALPFEYSSGAESHLTWSRQQRSHSSAIATHDPNELILLSLSNPAERMECVNPDRLADVGQFVFMQSTEHTPPFMDGIVTLEDVKQILAVKYQGELWRRMTLHSRNGDTGIHFYVGSRTRQQAIIGNPERKGLLVADFEAGSLCIGLLNDTFSCYDMAGQFTVSQLVYSLTAVRGASLFLRTEFETEAKLFRFKAGLVTNSIGDPSVEENLFEQRLNESGFEWLERMYNEDGRAVLSISTLRLDAQMRSTNCQTIGSVQIRPLRFQVGEWLEGENFEVNVSAKGDLTLVKTGNLLKASLLTQVGEDWKCAVDRLSGVCASETNGTFYFLSKAQSVYEYTTEFEMQLTRNVESHADLAILLAHVESDI--RTNGFVAPWDLQHLLSFPHNLSEGARTITRGMDTSVPISSGMRVTGTIQLWAIVLYGFLLLFFVSVVVFFKFKTLASINIERVYRRVVLQKESGYQSLKIPSTAPTIGIEALQEDGEGGWTASHCMM 578          
BLAST of Gvermi7613.t1 vs. uniprot
Match: A0A2V3ID58_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID58_9FLOR)

HSP 1 Score: 229 bits (585), Expect = 4.660e-68
Identity = 115/230 (50.00%), Postives = 161/230 (70.00%), Query Frame = 0
Query:  180 LLVHSRNGDKDLQLYAGGKGGQLALLVNPAEKGLLIADFESGALCKGFLDQEFSCYDMAGQFTLSQLTYSIASIRGGTIFLRTSFENAAKLYRFRDKWIFNSIGDPKVQANRLKQRPNETGFQWLSRHRKEN--PFLSISTIELDSQVQSVDCQTSGSVQIRPLILRTGKSLGDDEFGLNISGRGDIILVKGGGKLQTFLLTKAGD-FLCAVDESNAICKSSENQTIYFL 406
            + +HSRNGD  + LY G + GQ A++ NP  +GLL+ADFE+G+LCKG L+  FSCYDMAGQ T+SQL YS+ ++RG ++FLRT FE  AKL+RF+   + NS+G P V+ N  ++R NE+GF+WL R   E+    LSIST+ LD+Q++S +CQ+ GSVQIRPL  + G+ L  ++F + +S +GD+ LVK G  LQ  LL + G+ + CAVD  + +C S  N T YFL
Sbjct:    1 MTLHSRNGDTGIHLYVGVRTGQQAVIGNPERRGLLVADFEAGSLCKGLLNDTFSCYDMAGQLTVSQLVYSLTAVRGDSLFLRTKFETEAKLFRFKAGLVTNSVGGPSVEENLFERRQNESGFEWLERMYNEDGRAILSISTLRLDAQMRSSNCQSIGSVQIRPLRFQVGEWLEGEKFEVIVSPKGDLNLVKTGILLQATLLMQVGEEWKCAVDRISGVCVSKTNGTFYFL 230          
The following BLAST results are available for this feature:
BLAST of Gvermi7613.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0G4_9FLOR1.130e-19251.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID58_9FLOR4.660e-6850.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 499..519
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..498
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 520..573
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..91
NoneNo IPR availableTMHMMTMhelixcoord: 497..519
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:457133..458854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7613.t1Gvermi7613.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 457133..458854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7613.t1 ID=Gvermi7613.t1|Name=Gvermi7613.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=574bp
MDTGIQVQFWNVLKYVLLTLILAPVAECAMARVTAWRHAKLVYNGHPIRL
KSSWLGNFSLHQEVETLHPSSRLWQVLSIFLALAIALPFEYGSGARSQLI
WSQQRSFSSSLATNSSNDLIFLAHNDPRQVECVNPKRLSEVGEFIFMEPT
QDKPPFLNGVLTLERVNNLLGDTVHKWAVLLVHSRNGDKDLQLYAGGKGG
QLALLVNPAEKGLLIADFESGALCKGFLDQEFSCYDMAGQFTLSQLTYSI
ASIRGGTIFLRTSFENAAKLYRFRDKWIFNSIGDPKVQANRLKQRPNETG
FQWLSRHRKENPFLSISTIELDSQVQSVDCQTSGSVQIRPLILRTGKSLG
DDEFGLNISGRGDIILVKGGGKLQTFLLTKAGDFLCAVDESNAICKSSEN
QTIYFLDKGEGVFEYTSVFGLQITRDLESPTDLAVLRSLMNSDATYHRNG
RAAFWDVQRLVESFAPLDGGARTITRTMDAKVAVSTGARVSGTVETWAVL
LYGSTLFLLLLLLCFVRLVPLTGITVEDTYRRVVWQRERGSEPLQTLKTA
PKIGFQVGETENSEHLIASYYLI*
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