Gvermi7707.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7707.t1
Unique NameGvermi7707.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length247
Homology
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BLAST of Gvermi7707.t1 vs. uniprot
Match: A0A2V3IGH3_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH3_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 1.590e-31
Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 0 
Query:   50 QQQEEVVFAVNSSSTGFARTTSAGITVQRGTSGVLTFSFKIEAVEAETLATLDQEFSSSLSVSEREEYRRLREDYRSGFGIPFLSWLGINLNNRRVTREDMERTFELREDYNTQSRIAEQIISNVQVQELQISGELTAFGTSFIPTTVFAFVRIARIQTQDGMTLTVVSQSGDNLVAADAGGNTVPSSGGDINII 244
            + +  V++ + +S +G  RT  AGITVQRGTSG L+FS  ++ V A+ LA +D EF  SLS ++R  Y   R  Y    G+PFL ++G +L  + VT  DM+     + +Y + +R A +I+   +++ L+ISG  T  GTSFIP T   F+++A++   DG    VVS   D ++      N V  +G D  I+
Sbjct:   50 RDESGVIYPLLNSISGAIRTIGAGITVQRGTSGTLSFSVTLQGVRADELADMDAEFIDSLSFADRSAYELERRSYTGDLGVPFLRFVGADLR-KNVTECDMQLVRVTQPNYESNARAANKILQESEIKTLRISGRRTITGTSFIPRTALVFIQVAQVTLPDGTCKRVVSNRDDAVIVGSTN-NRVIDTGADEFIV 242
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BLAST of Gvermi7707.t1 vs. uniprot
Match: R7Q4Y7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y7_CHOCR)

HSP 1 Score: 68.9 bits (167), Expect = 2.420e-11
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0 
Query:  145 VTREDMERTFELREDYNTQSRIAEQIISNVQVQELQISGELTAFGTSFIPTTVFAFVRIARIQTQDGMTLTVVSQSGDNLVAADAGGNTVPSSGGDINIITL 246
            +++E++    E  E++  + +    I+  V    ++I+G LTA G S IPT  FAFVR+ARI+ +DG T  VVS   ++++AAD  G+ V +S  + +I+ +
Sbjct:   13 LSKEELVEKRESSEEFRKREQALTSILETVADTRIRINGTLTATGVSQIPTVAFAFVRLARIEFEDGSTQLVVSNKNEDIIAADEDGDAVGTSDQESDILCV 114
The following BLAST results are available for this feature:
BLAST of Gvermi7707.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IGH3_9FLOR1.590e-3136.92Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
R7Q4Y7_CHOCR2.420e-1135.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:2850153..2850893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7707.t1Gvermi7707.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 2850153..2850893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7707.t1 ID=Gvermi7707.t1|Name=Gvermi7707.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=247bp
MFFTKFMLSLPFMCIIKLAFASVIENHNSVIDIPAFDIQEATLRIPLARQ
QQEEVVFAVNSSSTGFARTTSAGITVQRGTSGVLTFSFKIEAVEAETLAT
LDQEFSSSLSVSEREEYRRLREDYRSGFGIPFLSWLGINLNNRRVTREDM
ERTFELREDYNTQSRIAEQIISNVQVQELQISGELTAFGTSFIPTTVFAF
VRIARIQTQDGMTLTVVSQSGDNLVAADAGGNTVPSSGGDINIITL*
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