Gvermi7674.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7674.t1
Unique NameGvermi7674.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length225
Homology
BLAST of Gvermi7674.t1 vs. uniprot
Match: A0A2V3J6U1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 176 bits (445), Expect = 9.220e-52
Identity = 99/226 (43.81%), Postives = 138/226 (61.06%), Query Frame = 0
Query:    1 MRTSSVCFTLVSLALTFAACGADRICPNQCRANRQAAVNDCNNFNNEIYALCEVVSCQ-GGFSCSFPSNSFLIDYDQFANLEMVIEYTWSPEHRDLDTSTRLMGSDVINVGFSCPGTSPIMSYGGDVASYGGTEYAVIDLQDSA-GGLFDDSVAIHAHAGWHGTQNHGPARVSVYMRGKADKVLAVGTVLSTEIYPGTQSGCANKHVATVVYFHGNDNTRITLSRA 224
            MR   V F L S+    A   ++ +CPN+C  +R  +  +C++      +LC V  C+  G+SCS P NSF+I  +Q + LE VIEYTWSPE RDLDTSTR +     NVGFSC   +  + +GGD  S GGTE AVID++ +   G ++DS AI ++AGW  + N G A++ VY+R K+D  LA    +S  I PGTQ  C+  +VATV    G+ +TR+TL +A
Sbjct:    1 MRCYFVFFLLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTR--SLCAVEECEDNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDG---NVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLEKA 221          
BLAST of Gvermi7674.t1 vs. uniprot
Match: A0A2V3ICG8_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 143 bits (360), Expect = 2.450e-38
Identity = 82/180 (45.56%), Postives = 109/180 (60.56%), Query Frame = 0
Query:   50 ALCEVVSCQG-GFSCSFPSNSFLIDYDQFANLEMVIEYTWSPEHRDLDTSTRLMGSDVINVGFSCPGTSPIMSYGGDVASYGGTEYAVIDL----QDSAGGLFDDSVAIHAHAGWHGTQNHGPARVSVYMRGKADKVLAVGTVLSTEIYPGTQSGCANKHVATVVYFHGNDNTRITLSRA 224
            ++C V  C+  G+SCS   NSF+I  +Q   LE VIEYTWSPE RDLD STR +     NVGF C G +  + +GGD  S G TE  VID+    QDS    ++DS AI ++A W  + N G A++ VY+R K+D  LA    +S  I PGTQS C++  VA V    G+ +TR+TL +A
Sbjct:  103 SVCAVEECENNGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDG---NVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSK---WEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLEKA 276          
The following BLAST results are available for this feature:
BLAST of Gvermi7674.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6U1_9FLOR9.220e-5243.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG8_9FLOR2.450e-3845.56Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..224
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1869887..1870561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7674.t1Gvermi7674.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1869887..1870561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7674.t1 ID=Gvermi7674.t1|Name=Gvermi7674.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=225bp
MRTSSVCFTLVSLALTFAACGADRICPNQCRANRQAAVNDCNNFNNEIYA
LCEVVSCQGGFSCSFPSNSFLIDYDQFANLEMVIEYTWSPEHRDLDTSTR
LMGSDVINVGFSCPGTSPIMSYGGDVASYGGTEYAVIDLQDSAGGLFDDS
VAIHAHAGWHGTQNHGPARVSVYMRGKADKVLAVGTVLSTEIYPGTQSGC
ANKHVATVVYFHGNDNTRITLSRA*
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