Gvermi7665.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7665.t1
Unique NameGvermi7665.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length311
Homology
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A2V3IUA5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA5_9FLOR)

HSP 1 Score: 266 bits (681), Expect = 9.740e-79
Identity = 140/249 (56.22%), Postives = 180/249 (72.29%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFPSLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQLVDTHWSLRLIMLAVILIDIVRRALTRDRLSF---ADVKTTLRAA------PPSPASYEPDALTPAFIIAAAFALFLFCQLLSVKINRIYWELAKHPRI 240
            M+LG+VSF+F++YET+A+P G TVLSFEFAHVFIFLLA+FYT+V++ AM  SLR+S RWK ME+VDL RY+ LK  Y   R RI +H  +  +L  WWFP++  + R+  LHE +AFHDIRFQ+IY+R LPEH R AS LR++KSA+FL+LV+THWSL  I+L ++L DI+RR LTR  +     A  K  +RAA      PP    YEPD    AFII +A  L +FCQ+LS KI +IYWEL KHPR+
Sbjct:   55 MVLGLVSFIFILYETIAKPTGDTVLSFEFAHVFIFLLAIFYTIVLIVAMVTSLRLSKRWKEMEQVDLVRYLHLKEKYTQFRHRIHEHKGSYWQLFHWWFPNIKNLFRYWDLHELMAFHDIRFQVIYYRNLPEHFRFASFLRKIKSASFLELVETHWSLYAILLVLVLADILRRYLTRSDIDTPVKAAAKVVMRAAVDKKDLPP----YEPDNAESAFIIVSAVLLGIFCQVLSSKIRKIYWELTKHPRV 299          
BLAST of Gvermi7665.t1 vs. uniprot
Match: R7Q6C9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6C9_CHOCR)

HSP 1 Score: 214 bits (545), Expect = 1.510e-59
Identity = 116/240 (48.33%), Postives = 153/240 (63.75%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFPSLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQLVDTHWSLRLIMLAVILIDIVRRALTRDRLSFADVKTTLRAAPPSPASYEPDALTPAFIIAAAFALFLFCQLLSVKINRIYWELAKHPRI 240
            M+LG++SF F+ YE  A+P    + SFEFAHVFIFLLAV Y++VV+ +M  SLR+SARWK+ E+VDL  Y+ LK  Y   R RI  H     R   WWFP    + ++  LHE +AFHDIRFQ I++R LPEH R +S LRR+KS TF++LV++HWSL +I+LAV+L DI RR +  D                   S   D    AFI+ +A AL L  Q+L++KI  +YWEL K+PRI
Sbjct:   56 MILGIISFSFIFYEISAKPDKDIIFSFEFAHVFIFLLAVLYSLVVLGSMFTSLRLSARWKKTEKVDLVTYLQLKDKYTRFRLRIHKHRGPYWRNFQWWFPHFPDLWQYWQLHEMMAFHDIRFQFIFYRNLPEHFRFSSFLRRIKSVTFVELVESHWSLYVILLAVVLGDITRRIVISDPTQ----------------SGNTDVAESAFIVGSAIALSLCVQVLAMKIRSVYWELTKNPRI 279          
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A2V3IEF2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEF2_9FLOR)

HSP 1 Score: 199 bits (506), Expect = 4.840e-55
Identity = 118/273 (43.22%), Postives = 165/273 (60.44%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFPSLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQLVDTHWSLRLIMLAVILIDIVRRALTRDRLSFADVKT---TLRA---------APPSPASYEPDALTPAFIIAAAFALFLFCQLLSVKINRIYWELAKHPRILRDVEHIGRNPDLELERKLSG 261
            M+LG+VS LFL+Y  +A P+   V SFEFAHVFIF LA+F+   V+ A+AASLR+S  WK +E V L  Y ALK  Y  LR R+    +   R++ WW     R+ RFR LHE +AFHD+RFQ+I+FRRLP+  R ++ LRR+K   F+ LV+ H+SL ++ LA +L D+VRR  + D  S A ++T   T+RA          P    ++  D +  A +IA A AL +  Q+L++KI  IYW L K+PRI     H      L+L ++  G
Sbjct:   58 MVLGLVSILFLMYTQLAHPKPTAVHSFEFAHVFIFALAIFFVAAVMCALAASLRLSVYWKSIEHVALPHYRALKTEYTALRLRMHSRTSRVWRVVGWWLTDPRRLSRFRFLHETLAFHDLRFQIIFFRRLPDDFRFSAFLRRIKGIYFVDLVEPHYSLWILFLAAMLGDLVRRYASGD--SVARLRTLSGTVRANDAGSAKDAGPVDDIAFREDVVGSAMLIAFALALIVIVQVLALKIRLIYWHLTKNPRIYYAHVHAVATSPLDLSQQTPG 328          
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A7S1TH10_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TH10_9RHOD)

HSP 1 Score: 133 bits (334), Expect = 4.020e-31
Identity = 72/173 (41.62%), Postives = 106/173 (61.27%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFPSLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQLVDTHWSLRLIMLAVILIDIVRR 173
            MLLG+VSF+F + E    P    VLSFEF H+ +F LA++Y VVVV++  +S+R+S +WK+ME V+LQ YV  +  Y+ L+   R H       L W    L R+ R R LH+ + +HD+RFQ I++R+LPE     + L +VK+  +  LV+ HW+   I L +  ID+ RR
Sbjct:   79 MLLGIVSFIFTIVELSWHPAKNVVLSFEFVHLLLFFLALWYIVVVVSSNVSSVRLSQKWKKMEYVELQEYVLARQEYEKLQIERRRHPGKLWSALLWCKGDLRRLTRHRHLHDLMNYHDLRFQFIFYRQLPEDFNFTAYLLKVKATIYAHLVEIHWTFWAIALVLQSIDLWRR 251          
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A1X6P3X1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3X1_PORUM)

HSP 1 Score: 127 bits (319), Expect = 5.090e-29
Identity = 86/242 (35.54%), Postives = 131/242 (54.13%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRD-HAAAPCRLLPWWFPSLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQLVD---THWSLRLIMLAVILIDIVRRALTRDRLSFADVKTTLRAAPPSPASYEPDALTPAFIIAAAFALFLFCQLLSVKINRIYWELAKHP 238
            ++LGVVS +F+++ T         +SFEFAH+ +F LAVFYTV ++    AS+ +S RW+R+E + L  Y+A K  Y  LRA +RD H +A  R   W   +L  + R+  LHE +AFHD+RFQ +++R LP H   A+ L RVK+A F  LV+   T W+L   +L +I++D+ RR     +                    E   +    ++  A  + +   +L  KI RI W+L +HP
Sbjct:   57 LILGVVSLIFVLFVTFGDLSAQATVSFEFAHLVLFALAVFYTVTLLVTSYASVVLSRRWQRIEALPLDTYLAYKAEYGALRA-VRDRHRSALWRKGLWSKGNLLALARWEHLHETLAFHDVRFQFLFYRDLPAHFPFAAFLNRVKTALFTSLVEVPATSWAL---ILPIIVLDMARREWVVPQ--------------------EGIIIDRYVLLGLAVLVTVLVDVLGWKIGRINWQLFRHP 274          
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A7S0ZF18_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZF18_9RHOD)

HSP 1 Score: 114 bits (286), Expect = 1.400e-27
Identity = 57/157 (36.31%), Postives = 97/157 (61.78%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFPSLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQLVDTHWS 157
            M+LG++S   ++ ET        +++FE AHVF+FLLA+F++  V+ +  +S+ +SARWKR+E +    Y  LK  Y+ L+ +    +    +   W    ++++ R R+L + ++FHD RFQ IY+R+LPE    A  LR+VK+  F+QL++ HW+
Sbjct:    8 MVLGLISLGVILVETQVYVDHDLLIAFESAHVFVFLLAIFFSFTVIVSAVSSIALSARWKRLEVLAFDDYQELKIEYEHLKDQQESKSNLFWKWFLWTHGDISKIWRLRSLSDIMSFHDARFQFIYYRKLPESFGFAKFLRKVKAKIFVQLIEVHWT 164          
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A5J4YX65_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX65_PORPP)

HSP 1 Score: 112 bits (279), Expect = 9.080e-24
Identity = 62/173 (35.84%), Postives = 105/173 (60.69%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFPSLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQLVDTHWSLRLIMLAVILIDIVRR 173
            M+LG ++ + LV E+        +L+FE AHV +F+LAVF++V V+ +   SL++S+ W +ME ++ + Y  ++  YD    + +   +   R   W    L+++RR R L E ++FHDIRFQ I+FR+LPE+   +  LR+VK+  F+++V+ HW+  L  L  +  D +RR
Sbjct:   75 MILGCIALVVLVVESQVHLAPDVLLAFEAAHVLLFMLAVFFSVSVITSAYMSLKLSSTWIKMEHIEYKEYEDMRVEYDLYDDKRKSKDSWLWRHFLWAEGKLSKIRRHRKLAEIMSFHDIRFQFIFFRKLPENFAFSRFLRKVKAHVFVEIVEIHWTHWLSCLVFVGFDSLRR 247          
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A7S0FZP1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZP1_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 4.070e-9
Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFPSLARMRRFRALHE 113
            M LG+++ +F + E    P    V++FE+AH+F+F LAV   V V A    SLR+S RWK+ + +   +Y   K  Y+ L  +   H       L W   +  ++ RF  LH+
Sbjct:   40 MSLGIIALIFTLIEVAVHPSKTVVIAFEYAHIFLFFLAVMNIVAVGATTYTSLRISRRWKKFQNLTTFKYEKDKNEYEALSTQKHSHHNIFWESLFWHGCNFRQLYRFNYLHD 152          
BLAST of Gvermi7665.t1 vs. uniprot
Match: A0A7S1XI14_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XI14_9RHOD)

HSP 1 Score: 57.0 bits (136), Expect = 1.110e-6
Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    1 MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMAASLRMSARWKRMER-VDLQRYVALKCAY 77
            M+LG++S   ++ E         +++FE AH+F+FLLAVF+++ V  +   SLR+SARWKR+ER V L  Y+  K  Y
Sbjct:   44 MVLGLISLSIVLIEAKVHIPHDLLVAFEAAHIFVFLLAVFFSLTVGVSAVISLRLSARWKRLERDVSLNDYLEAKIEY 121          
The following BLAST results are available for this feature:
BLAST of Gvermi7665.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IUA5_9FLOR9.740e-7956.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q6C9_CHOCR1.510e-5948.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IEF2_9FLOR4.840e-5543.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TH10_9RHOD4.020e-3141.62Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A1X6P3X1_PORUM5.090e-2935.54Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZF18_9RHOD1.400e-2736.31Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4YX65_PORPP9.080e-2435.84Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0FZP1_9RHOD4.070e-932.74Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S1XI14_9RHOD1.110e-642.31Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..223
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availableTMHMMTMhelixcoord: 156..175
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 203..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:1570806..1601053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7665.t1Gvermi7665.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 1570806..1601053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7665.t1 ID=Gvermi7665.t1|Name=Gvermi7665.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=311bp
MLLGVVSFLFLVYETVARPRGATVLSFEFAHVFIFLLAVFYTVVVVAAMA
ASLRMSARWKRMERVDLQRYVALKCAYDDLRARIRDHAAAPCRLLPWWFP
SLARMRRFRALHEFVAFHDIRFQLIYFRRLPEHVRIASLLRRVKSATFLQ
LVDTHWSLRLIMLAVILIDIVRRALTRDRLSFADVKTTLRAAPPSPASYE
PDALTPAFIIAAAFALFLFCQLLSVKINRIYWELAKHPRILRDVEHIGRN
PDLELERKLSGIALFLKTEEEDYMVRSGPLHMNNCRQRTPKYSITHCVSN
GFYWSQIGSQ*
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