Gvermi7683.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7683.t1
Unique NameGvermi7683.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length465
Homology
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BLAST of Gvermi7683.t1 vs. uniprot
Match: R7QK76_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK76_CHOCR)

HSP 1 Score: 139 bits (349), Expect = 2.070e-35
Identity = 71/129 (55.04%), Postives = 94/129 (72.87%), Query Frame = 0 
Query:   20 SLYQPALAVLLLFLAGSTFSLGVFIPQVEASSKTAHNLDGVWETAMGAMHFLSAPIMIFSSMYLDAGQVPVHPMENIAYHSTKTFRLRLLHMVSAIAFGLLAFSALGAQYSNRFMLFIGVSFQAFPLGI 148
            S +  ALAV+LL L GSTF+LG+FIPQVE  +   H+LDG+WETAMGAMH  SAP+MIF+ ++LDAG     P  ++ +   K+ RLRLL+++SA++F  LAFS  GA +S+RF L  GV+ QAFPL I
Sbjct:   13 SFFHGALAVVLLLLGGSTFALGIFIPQVEDFASPPHHLDGLWETAMGAMHLFSAPVMIFAGIFLDAGLDDPLP-ASLPFWVGKSSRLRLLNLLSAVSFACLAFSGYGAAHSDRFYLLFGVTMQAFPLAI 140
The following BLAST results are available for this feature:
BLAST of Gvermi7683.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QK76_CHOCR2.070e-3555.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 109..390
e-value: 3.6E-9
score: 36.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..191
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 192..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..376
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 428..446
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..294
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 409..427
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..387
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 295..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 347..351
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 388..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 447..464
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 328..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 154..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 317..327
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..85
NoneNo IPR availableTMHMMTMhelixcoord: 388..410
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 289..311
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 254..276
NoneNo IPR availableTMHMMTMhelixcoord: 425..447
NoneNo IPR availableTMHMMTMhelixcoord: 331..353
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 19..450

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:2267022..2268502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7683.t1Gvermi7683.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_64 2267022..2268502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7683.t1 ID=Gvermi7683.t1|Name=Gvermi7683.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=465bp
MSSNSHSVPQSLPPFGGKESLYQPALAVLLLFLAGSTFSLGVFIPQVEAS
SKTAHNLDGVWETAMGAMHFLSAPIMIFSSMYLDAGQVPVHPMENIAYHS
TKTFRLRLLHMVSAIAFGLLAFSALGAQYSNRFMLFIGVSFQAFPLGILY
LTCTQALLAWVPSHAGIAIAVGHFAFGLGTIGLTQVFSFLITMFGSVAAI
YFASIILAVLAFLPALLLRWPPVDSTTQEEQDPLLQRFDAIESISWRRLV
RIPNFWLYIGAVFTTSSSYMLNPYYFKLGHLFNKPLGELVLFFNLSNLVA
TVCSLFSTALTDVVGFGKGFFFSGSKNIMGLLMVMQTICFFASIFINNSL
NFLGFVTVKALLKIIVTCHVGCSALLARDLFGSKNSCIVFGFGAGLALGF
GEATSAWIMAAVEAASAPILTPSNYNAFYWIATAWSMFGVMCIICVQRHE
SKGMFEPIYSRPPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR036259MFS_trans_sf