Gvermi13675.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13675.t1
Unique NameGvermi13675.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length325
Homology
BLAST of Gvermi13675.t1 vs. uniprot
Match: A0A0B5W3P8_9FLOR (Photosystem II protein D1 n=23 Tax=Ceramiales TaxID=2802 RepID=A0A0B5W3P8_9FLOR)

HSP 1 Score: 651 bits (1679), Expect = 1.410e-235
Identity = 322/324 (99.38%), Postives = 323/324 (99.69%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIW TAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPS+NG
Sbjct:   39 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWLTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSING 362          
BLAST of Gvermi13675.t1 vs. uniprot
Match: A0A2H4FG03_9FLOR (Photosystem II protein D1 n=36 Tax=root TaxID=1 RepID=A0A2H4FG03_9FLOR)

HSP 1 Score: 638 bits (1646), Expect = 1.560e-230
Identity = 316/327 (96.64%), Postives = 322/327 (98.47%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAA---VFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQL+VLHFLLGV CYIGREWELSYRLGMRPWISVAFTAPVAAAAA   VFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLGLWPV+GIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLAS ES+P+ALVAPS+NG
Sbjct:   37 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLVVLHFLLGVCCYIGREWELSYRLGMRPWISVAFTAPVAAAAAAGAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGLWPVVGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASGESVPVALVAPSING 363          
BLAST of Gvermi13675.t1 vs. uniprot
Match: PSBA_PHATC (Photosystem II protein D1 n=459 Tax=root TaxID=1 RepID=PSBA_PHATC)

HSP 1 Score: 605 bits (1559), Expect = 2.530e-217
Identity = 296/324 (91.36%), Postives = 308/324 (95.06%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            M PTLLTATS +IIAF+AAPPVDIDGIREPVAGSLLYGNNII+GAVIPSS AIGIHFYPIWEAAS+DEWLYNGGPYQLIVLHFLLGV  Y+GREWELSYRLGMRPWI VAF+APVAAA+AVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFH  GVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL LWPV+GIW TAM VSTMAFNLNGFNFNQSVVDSQGRVINTWADI+NRA+LGMEVMHERNAHNFPLDLAS E LP+AL AP+VNG
Sbjct:   37 MFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIITGAVIPSSNAIGIHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGVSTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360          
BLAST of Gvermi13675.t1 vs. uniprot
Match: UPI000694C59A (photosystem II q(b) protein n=1 Tax=Planktothrix mougeotii TaxID=54306 RepID=UPI000694C59A)

HSP 1 Score: 605 bits (1559), Expect = 2.530e-217
Identity = 286/324 (88.27%), Postives = 308/324 (95.06%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            MIPTLLTAT  +I+AFVAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSS AIG+HFYPIWEAASLDEWLYNGGPYQL++ HFL+G+LCY+GREWELSYRLGMRPWI VA++APVAAAAAVFL+YPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHF LG WPV+GIWFTA+ VSTMAFNLNGFNFNQS++DS GRVINTWAD+LNRANLGMEVMHERNAHNFPLDLAS ES P+AL+AP +NG
Sbjct:   37 MIPTLLTATICYIVAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGILCYMGREWELSYRLGMRPWICVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFLLGAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSTGRVINTWADVLNRANLGMEVMHERNAHNFPLDLASGESAPVALIAPQING 360          
BLAST of Gvermi13675.t1 vs. uniprot
Match: A0A1T4ZJJ4_9CYAN (Photosystem II protein D1 n=9 Tax=root TaxID=1 RepID=A0A1T4ZJJ4_9CYAN)

HSP 1 Score: 602 bits (1552), Expect = 2.950e-216
Identity = 285/324 (87.96%), Postives = 307/324 (94.75%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            MIPTLLTAT  +I+AF+AAPPVDIDGIREPVAGSLLYGNNIISGAV+PSS AIG+HFYPIWEAASLDEWLYNGGPYQL++ HF +G+LCY+GREWELSYRLGMRPWI VA++APVAAAAAVFL+YPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHF LG WPV+GIWFTA+ VSTMAFNLNGFNFNQS++DS GRVINTWAD+LNRANLGMEVMHERNAHNFPLDLAS ES P+ALVAP +NG
Sbjct:   37 MIPTLLTATICYIVAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFFIGILCYMGREWELSYRLGMRPWICVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFLLGAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSTGRVINTWADVLNRANLGMEVMHERNAHNFPLDLASGESAPVALVAPQING 360          
BLAST of Gvermi13675.t1 vs. uniprot
Match: PSBA_EMIHU (Photosystem II protein D1 n=102 Tax=root TaxID=1 RepID=PSBA_EMIHU)

HSP 1 Score: 602 bits (1552), Expect = 2.950e-216
Identity = 291/322 (90.37%), Postives = 308/322 (95.65%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSV 322
            M PTLL+A S +IIAF+AAPPVDIDGIREPVAGSLLYGNNIISGAV+PSS AIG+HFYPIWEAAS+DEWLYNGG YQL+VLHF +GV  YIGREWELSYRLGMRPWI VAF+APVAAAAAVF++YPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLG WPV+GIWFTAM V+TMAFNLNGFNFNQSVVDSQGRVINTWADILNR+NLGMEVMHERNAHNFPLDLA+ ESLP+ALVAP+V
Sbjct:   37 MFPTLLSAISAYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGVHFYPIWEAASIDEWLYNGGTYQLVVLHFFIGVCAYIGREWELSYRLGMRPWICVAFSAPVAAAAAVFVIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWFTAMGVATMAFNLNGFNFNQSVVDSQGRVINTWADILNRSNLGMEVMHERNAHNFPLDLAAGESLPVALVAPAV 358          
BLAST of Gvermi13675.t1 vs. uniprot
Match: PSBA_CYAPA (Photosystem II protein D1 n=35 Tax=Eukaryota TaxID=2759 RepID=PSBA_CYAPA)

HSP 1 Score: 601 bits (1550), Expect = 5.950e-216
Identity = 288/323 (89.16%), Postives = 309/323 (95.67%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVN 323
            M P LLTAT++FIIAFVAAPPVDIDGIREPVAGSL YGNNIISGAVIPSSAAIG+HFYPIWEAASLDEWLYNGGPYQ +V+HFLLGV CY+GREWELS+RLGMRPWI+VA++APVAAA AVFL+YPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFH +GVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL LWPV+GIWFTA+ +STMAFNLNG NFNQSVVDSQGRVI+TWADI+NRANLGMEVMHERNAHNFPLDLAS E +P+AL APS+N
Sbjct:   37 MFPLLLTATTLFIIAFVAAPPVDIDGIREPVAGSLFYGNNIISGAVIPSSAAIGMHFYPIWEAASLDEWLYNGGPYQFVVMHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVGIWFTALGLSTMAFNLNGLNFNQSVVDSQGRVISTWADIINRANLGMEVMHERNAHNFPLDLASGEVMPVALTAPSIN 359          
BLAST of Gvermi13675.t1 vs. uniprot
Match: A0A0K0LUD5_9FABA (Photosystem II protein D1 n=131 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0K0LUD5_9FABA)

HSP 1 Score: 600 bits (1546), Expect = 1.870e-215
Identity = 289/324 (89.20%), Postives = 309/324 (95.37%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            MIPTLLTATSVFIIAF+AAPPVDIDGIREPV+GSLLYGNNIISGA+IP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFLLGV CY+GREWELS+RLGMRPWI+VA++APVAAA AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL  WPV+GIWFTA+ +STMAFNLNGFNFNQSVVDSQGRVINTWADI+NRANLGMEVMHERNAHNFPLDLAS E       APSVNG
Sbjct:   37 MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASME-------APSVNG 353          
BLAST of Gvermi13675.t1 vs. uniprot
Match: A0A7S2RD40_9STRA (Photosystem II protein D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD40_9STRA)

HSP 1 Score: 600 bits (1547), Expect = 2.650e-215
Identity = 291/324 (89.81%), Postives = 308/324 (95.06%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            MIPTLLTATS FII F+AAPPVDIDGIREPVAGSL+YGNNIISGAVIPSS AIG+HFYPIWEAAS+DEWLYNGGPYQLIVLHFLLGV  Y+GREWELSYRLGMRPWI VAF+APVAAA+AVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFH  GVAGVFGGSLFSAMHGSLVTSSLIRETT++ES NNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL LWPVLGIW TAM +STMAFNLNGFNFNQSVVDS+GRVINTWADILNRA+LG+EVMHERNAHNFPLDLA+ E  P+A+ AP+VNG
Sbjct:   49 MIPTLLTATSCFIIGFIAAPPVDIDGIREPVAGSLMYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTDSESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWITAMGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRADLGIEVMHERNAHNFPLDLAAGEVFPVAVSAPAVNG 372          
BLAST of Gvermi13675.t1 vs. uniprot
Match: A0A1Z4RWM5_9CHRO (Photosystem II protein D1 n=19 Tax=Cyanobacteria TaxID=1117 RepID=A0A1Z4RWM5_9CHRO)

HSP 1 Score: 599 bits (1545), Expect = 3.440e-215
Identity = 282/324 (87.04%), Postives = 307/324 (94.75%), Query Frame = 0
Query:    1 MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSVNG 324
            MIPTLL AT+ F+IAFVAAPPVDIDGIREPVAGSL+YGNNIISGAV+PSS AIG+HFYPIWEAASLDEWLYNGGPYQLI+ HFL+GV CY+GR+WELSYRLGMRPWI VA++APV+AA AVFL+YP+GQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLG WPV+GIWFTAM +STMAFNLNGFNFNQS++DSQGRV+NTWADILNRANLG EVMHERNAHNFPLDLAS E+ P+AL AP++NG
Sbjct:   37 MIPTLLAATTCFLIAFVAAPPVDIDGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFLIGVFCYMGRQWELSYRLGMRPWICVAYSAPVSAATAVFLIYPLGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGISTMAFNLNGFNFNQSIMDSQGRVVNTWADILNRANLGFEVMHERNAHNFPLDLASGETAPVALTAPAING 360          
The following BLAST results are available for this feature:
BLAST of Gvermi13675.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B5W3P8_9FLOR1.410e-23599.38Photosystem II protein D1 n=23 Tax=Ceramiales TaxI... [more]
A0A2H4FG03_9FLOR1.560e-23096.64Photosystem II protein D1 n=36 Tax=root TaxID=1 Re... [more]
PSBA_PHATC2.530e-21791.36Photosystem II protein D1 n=459 Tax=root TaxID=1 R... [more]
UPI000694C59A2.530e-21788.27photosystem II q(b) protein n=1 Tax=Planktothrix m... [more]
A0A1T4ZJJ4_9CYAN2.950e-21687.96Photosystem II protein D1 n=9 Tax=root TaxID=1 Rep... [more]
PSBA_EMIHU2.950e-21690.37Photosystem II protein D1 n=102 Tax=root TaxID=1 R... [more]
PSBA_CYAPA5.950e-21689.16Photosystem II protein D1 n=35 Tax=Eukaryota TaxID... [more]
A0A0K0LUD5_9FABA1.870e-21589.20Photosystem II protein D1 n=131 Tax=Mesangiosperma... [more]
A0A7S2RD40_9STRA2.650e-21589.81Photosystem II protein D1 n=1 Tax=Rhizochromulina ... [more]
A0A1Z4RWM5_9CHRO3.440e-21587.04Photosystem II protein D1 n=19 Tax=Cyanobacteria T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000484Photosynthetic reaction centre, L/MPRINTSPR00256REACTNCENTREcoord: 73..101
score: 24.3
coord: 106..128
score: 19.46
coord: 161..187
score: 35.1
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 1..291
e-value: 1.5E-88
score: 296.4
IPR000484Photosynthetic reaction centre, L/MPANTHERPTHR33149PHOTOSYSTEM II PROTEIN D1coord: 7..292
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 155..181
IPR005867Photosystem II protein D1TIGRFAMTIGR01151TIGR01151coord: 1..324
e-value: 1.3E-214
score: 709.6
IPR005867Photosystem II protein D1HAMAPMF_01379PSII_PsbA_D1coord: 1..311
score: 51.230896
IPR036854Photosystem II protein D1/D2 superfamilyGENE3D1.20.85.10coord: 1..151
e-value: 5.3E-35
score: 122.6
IPR036854Photosystem II protein D1/D2 superfamilySUPERFAMILY81483Bacterial photosystem II reaction centre, L and M subunitscoord: 1..307
NoneNo IPR availablePANTHERPTHR33149:SF30PHOTOSYNTHETIC REACTION CENTRE, L/M-RELATEDcoord: 7..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..324
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 189..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..259
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..74
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 161..183
NoneNo IPR availableTMHMMTMhelixcoord: 73..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_59contigScGOVlb_59:85498..86472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13675.t1Gvermi13675.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_59 85498..86472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13675.t1 ID=Gvermi13675.t1|Name=Gvermi13675.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=325bp
MIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSS
AAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYR
LGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVF
QAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNG
YKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWFT
AMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNA
HNFPLDLASQESLPLALVAPSVNG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000484Photo_RC_L/M
IPR005867PSII_D1
IPR036854Photo_II_D1/D2_sf