Gvermi13664.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi13664.t1
Unique Name	Gvermi13664.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	787

Homology

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BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1MHS1_MELHR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Melanothamnus harveyi TaxID=397005 RepID=A0A1Z1MHS1_MELHR)

HSP 1 Score: 849 bits (2194), Expect = 3.000e-293
Identity = 556/1122 (49.55%), Postives = 558/1122 (49.73%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQL LTNILVRSPLTCSS RSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 +RVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLS+LEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQES KSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLGLTNILVRSPLTCSSFRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELSKHVTSNISGIVKFAHDIHLVPSRNRYGESVYKLYNDSSITIVSQEGQEKTFFLLKNSLLLVKNSQSIKKGQIIAEHPIDNKLSTEKAQKSVIADFSGSVHMDMTPSHEKVISINDSLVIWILSGEVYSLPKLSKLLVSKDQVIKQDDLIARTNLKNDVKGKIYIVKDKANLPKILLITSSKTYANIKVFSESINDYKRYFLQTDNNDKFLLKCYPNKRVLDQQIIGDLISNAYKTKTGGIIKYLDLSLSKSSDDDFYDINKSGYILWIPEETHIVNKDLSLLLVKNLSFIEVGTEVIQNVFVNNAGFLEISEKDGIIREIVIKPGKLVQLDLNNIKLEKYRGFLRPGEVLFNCINTDKLVYWEYIRIGNNDFILLRPVVIYSLPNKHLTLKFSPSSFSTDFINLKMVRRTFFRDGERIKSVSGVNLVFTHLIMDFKEGLTSSKCYMQLYPINNRTDKSIFFIKFITADFLAIKDSFFNKNYGLYSKTSILVNDGDYVESDSVICQTDIFSSVAGIVGHVEKENNVNFRIMIISQSNTLTVKLTNKMSVRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSILEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESRKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 1160

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BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1MB63_9FLOR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Polysiphonia elongata TaxID=159753 RepID=A0A1Z1MB63_9FLOR)

HSP 1 Score: 741 bits (1912), Expect = 8.060e-251
Identity = 491/1124 (43.68%), Postives = 534/1124 (47.51%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MADSLKDLGFYYATKAGISLSLEDLRIPP+KQ+LLESTF SIQ TDKRYKRGEITAVERFQKVIDTW+ ASDTLKQ+VIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDC T RGILVEEMIDNQ++LISL+Q+LLGRVLAEDLIDL+SNK++AK+   IDN++L+KIE L L+NILVRSPLTCSS RSICQLCYGWNLAH K+VDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   L+VK N+YIYAGD+I +N+ + VSG+I+S+D+ +VVIR+GQPYLISSGSL+HVT++ LIQKGENIATLIF+ FKTGDIVQGLPRIEEILEARKKVD SFNPHAILEYKFRSY+SQGLS+YNA+RLS+LEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIE+GGDT+YLPGELIELQKVELVN S + S K  A YYP+LLGITK+SLNTESFISAASFQETTKVLTEAAI+GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADSLKDLGFYYATKAGISLSLEDLRIPPSKQQLLESTFKSIQDTDKRYKRGEITAVERFQKVIDTWHDASDTLKQEVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCNTCRGILVEEMIDNQKILISLSQSLLGRVLAEDLIDLNSNKVIAKSKEYIDNEILDKIENLGLSNILVRSPLTCSSVRSICQLCYGWNLAHGKIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELSRNIVSDKEGIVCYPNNINLIPSRNRYGDSVQKLQSDSFINLMLKDGNSKTFFLLKNSLLLVKDSQIIKKGQVIGQYPIDNNLSTEKAQKSVVADFSGSVYIDNLNSDIKLLDTTVSSSTVVWILSGEVYSLPQLSKLLVSKDQLINKNDLLARTDLRNDIDGKIHVINDKFTVPKILLITSSKTYTNIKVIFEVVNDYKRYFLQTKNNDKFLLKLYPNKKIVNYQIIGDLISNAYKTKTGGIIKYLDLAVTKSSDQDFYDIHRSGYILWIPEETHVVNKDLSLLLVKNLSFIEVGTEIIQNVFANNTGFLEISEKDGIIREMVIKPGKLVKLNSNNIKLEKHRGFLRPGEILFNYITTDKLVYWEYIKISDNPFILLRPVVIYALPSKHLSLQFSDSSFSTDFINLKMVRRTFFRDGERIKSVSGVNLVFTHLIIEFKETLKNIKCYMQFQSINNNRHGSEFFIKFITADFLAIKDSFFSENYGLYSKTSILIKDGEYVKANSIICQTDIFSAITGKIGYIEKTNNINCRIMIISKSNTVSILLTNSTVLKVKSNNYIYAGDKISNNIISPVSGFIVSLDKNQVVIRIGQPYLISSGSLIHVTDANLIQKGENIATLIFDHFKTGDIVQGLPRIEEILEARKKVDISFNPHAILEYKFRSYLSQGLSVYNASRLSILEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIESGGDTDYLPGELIELQKVELVNQSLKLSDKKQALYYPVLLGITKASLNTESFISAASFQETTKVLTEAAINGKIDQLRGLKENVIIGRLIPA 1162

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BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1ME58_9FLOR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Polysiphonia infestans TaxID=2006978 RepID=A0A1Z1ME58_9FLOR)

HSP 1 Score: 730 bits (1884), Expect = 1.240e-246
Identity = 485/1123 (43.19%), Postives = 527/1123 (46.93%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLE TF SIQ+TDKRYKRGEITAVERFQKVIDTWN ASDTLKQD+IEYFK+TDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIF+NFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDC TS+G+L+EEM+DNQ++LISL Q+LLGRVL+EDLIDL+SN I+AKA   IDN +LEKIE+L+LTN+LV+SPLTCSS RSICQLCYGWNLAH K+VDLGEA+GII+AQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  L+V LN Y+Y+GD I   + ++VSG IISI++  V IRVGQPYLIS+GSLVHVT++ LIQKGENIATLIF+RFKTGDIVQGLPRIEEILEARKKVDTSFNPH ILEYKFRSY+SQGLS+YNA+RLS+LEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVEL N S + + K  + YYP+LLGITKSSLNTESFISAASFQETTKVLTEAAI GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLEVTFESIQNTDKRYKRGEITAVERFQKVIDTWNDASDTLKQDIIEYFKQTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFHNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCHTSKGVLIEEMVDNQKILISLNQSLLGRVLSEDLIDLNSNDIIAKAKDHIDNKLLEKIEKLELTNVLVKSPLTCSSVRSICQLCYGWNLAHGKIVDLGEAIGIISAQSIGEPGTQLTMRTFHTGGVFTGELSRNLISDVAGKVLYPNNINLVPSRNRYGDNVQRVDNDSFINISLKDGENKTFFLLKNSLLSVRDSQEIKHGQVICEYPTENNLSTEKAQKSVVADFSGSIHINNLNNSSNLILNSMTSRIVWVLSGEVYSLPKLSTLLIYKDQLIKKDYLIARTNLRNEIEGKIHIIRDKFPTPKILLITSSKTYITAKVFSEIVNDYKKYFLQTENNAKFLLKSYPNKKITNYQIIGDLISNAYKTKTGGIIKYLDLSVVKISDHDFYDINKSGYILWIPEETHIVNKDISLLLVKNLSFIEVGTEIIQNIFANNTGFLEISEKDGIIREIVIKPGKLVRLKTNEIKLEKYRGFLRPGEILFNNITTDKLVYWEYIKILDLDFILLRPVVIYALQNKYLSLPFSDFSFSTDFINLKMVRRTFFRDGERIKSVFGVNLVFTHLIVEFKESLKNIKCYMQFQPVDSNPHTSTFFIRFITADFLAIKGSSFSKNHGLYSKTSILVNHGAHVKANSIISQTDIFSGITGRIGYIEKTNNLNCRIMIIGESNIVNIKLTKNDFLKVNLNTYVYSGDEIASGIISSVSGLIISINKNNVGIRVGQPYLISTGSLVHVTDASLIQKGENIATLIFDRFKTGDIVQGLPRIEEILEARKKVDTSFNPHVILEYKFRSYLSQGLSVYNASRLSILEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELANNSLRLNNKKESLYYPVLLGITKSSLNTESFISAASFQETTKVLTEAAIQGKIDQLRGLKENVIIGRLIPA 1161

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BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1MAA9_9FLOR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Leptosiphonia brodiei TaxID=2608611 RepID=A0A1Z1MAA9_9FLOR)

HSP 1 Score: 730 bits (1884), Expect = 1.280e-246
Identity = 487/1124 (43.33%), Postives = 526/1124 (46.80%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MADSLKDLGFYYATKAGISLSLEDLRIPP+KQKLLESTF SIQ+TDKRYKRGEITAVERFQKVIDTWN ASDTLKQ+VIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDV+QDVIVR+YDC TSRGILVEEM+DNQ+VLISL+Q+LLGRVL+EDLID  S K++AK+   IDN++L+ IE L  TN+LVRSPLTCSS RSICQLCYGWNLAH K+VDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   L+++ N YIYAGD I DNV + VSG+II +D+ +VVIRVGQPYLISSGSL+HVT+S LIQKGENIATLIFE FKTGDIVQGLPRIEEILEARKKV+TSFNPH+IL+YKFRSY+SQGLS+YN+ RLS+LEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIE+GGDT+YLPGELIELQKVE VN S + S K  A YYPILLGITK+SLNTESFISAASFQETTKVLTEAAI GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADSLKDLGFYYATKAGISLSLEDLRIPPSKQKLLESTFQSIQNTDKRYKRGEITAVERFQKVIDTWNDASDTLKQEVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVRDYDCNTSRGILVEEMVDNQKVLISLSQSLLGRVLSEDLIDFQSGKVIAKSKDYIDNEILDIIENLGFTNVLVRSPLTCSSVRSICQLCYGWNLAHGKIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELARNVISDTEGIVLYPKNINLIPFRNRYGENVQQLQSDSFINVISQDGNSKTFFLLKNSLLLVKNSQQIKKGQVIGQYPIDNKLSTEKAQKSVIADFAGSVHINNFKNNINPGLTSVSSSQVVWILSGEVYSLPQSSKLLVSKNQLINKNDLIACTDLRNDIDGKIHIISHKFNIPKILLITSSKTYTNVKIISELVNDYKRYFLYTENGDKFLLKLYPNKKIVNYQIIGDLISNAYKTKTGGIIKYLDILVTKSSDQDFYDIHKSGYILWIPEETHIVNKDFSLLLVKNLSFIEIGTEIIQNVFANNTGFLEINEKDGIIREIVIKPGKLIKLTPSNVKLEKYRGFLRPGEVLFNYITTDKLVYWEYLKILDNNFVLLRPVVIYSLPHKNLPLNFSDSSFSTDFINLKMVRRTFFRDGERIKSVSGVNLVFTHLIIQFKENLKNVKCYMQFQPINNNRRALEFFIKFITADFLAIKDSSFSKNYGLYSKTSILVNDGEYVKSNSVICQTDIFSTTDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSNSLKIQTNSYIYAGDEITDNVVSTVSGFIILVDKNQVVIRVGQPYLISSGSLIHVTDSTLIQKGENIATLIFEHFKTGDIVQGLPRIEEILEARKKVETSFNPHSILDYKFRSYLSQGLSLYNSCRLSILEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIESGGDTDYLPGELIELQKVESVNSSLKISNKKQALYYPILLGITKASLNTESFISAASFQETTKVLTEAAISGKIDQLRGLKENVIIGRLIPA 1162

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BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1MAJ9_9FLOR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Vertebrata thuyoides TaxID=2006970 RepID=A0A1Z1MAJ9_9FLOR)

HSP 1 Score: 726 bits (1873), Expect = 5.520e-245
Identity = 479/1123 (42.65%), Postives = 526/1123 (46.84%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MAD LKDLGFYYATKAGISLSLEDLRIPP+KQ+LLESTF SIQ TDKRYKRGEITAVERFQKVIDTWN ASDTLKQ VI+YFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIF+NFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSR I++EEM+DNQ++LISL Q+LLGRVLAEDL+D +SNKI+AK N CID ++LEK+E+L + N+LVRSPLTCSS+RSICQLCYGWNLAH ++VDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ++V LN YIYAGD+I +++ ++VSG II+I+E +++IR GQPYLISSGSL+HV NSGLIQKGENIATLIFER KTGDIVQGLPRIEEILEARKK DTSFNPH+ILEYKFRSY+SQGL++YNA+RLS+LEIQLLLVKEVQ VYQSQGVYI+DKHIEVIVKQMTSKVK+ENGGDT YLPGELIEL KVELVN S +   K  A YYPILLGITK+SLNTESFISAASFQETTKVLTEAAI+GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADRLKDLGFYYATKAGISLSLEDLRIPPSKQELLESTFRSIQDTDKRYKRGEITAVERFQKVIDTWNDASDTLKQQVIDYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFHNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRAIIIEEMVDNQKILISLNQSLLGRVLAEDLVDYNSNKIIAKVNECIDTNLLEKVEKLQIRNVLVRSPLTCSSNRSICQLCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELSHNIISDVNGFVCYPPNIFLKSARNRYGENVQLVINDSFINIILSDKSQKTFFILKNSLLIVNDQQHIKKGQIIAEYPVDNKLSTERAQKSVVADFSGSIHINDDHSNINVGSKPIDNSILVWILSGEVYNLPKSSALLISKNQYIEKGDLLARTNLLNETEGKIHIIKDKFTFPKILLVTSSKVYTNVKVFYELLNDYKRYFLQTESSDKFLLKCHPNKRILNQQIIGDLISNAYKTKTGGIIKYLDLSVIKADEDIYNIYDSGYILWIPEETHIVNKDVSLLLVKNLSFIDVGIEIIQNVFANTTGFLEIIEKDGIIREIIIKPGRLIRFNLNDSTLEKYRGFLRPGEVLLDSITSDKLVYWEYIKIVSDHFILLRPVVIYSLPCKDLTLTFSDNSFATDFINLKMVRRTYFKDGERIKSVSGINLVSTHLIVEFQENISNMKCYMQLQSIKSKSNDVSFLIKFITADFLAIKDSFFSKNYGLYSKTSILINDGEHVKSNSIICQTDIFSSISGIIGYIEENSSSNCRIMIISKSNTVVLSIQDTCSIKVNLNSYIYAGDKITESIVSSVSGLIIAINENEIIIRTGQPYLISSGSLLHVNNSGLIQKGENIATLIFERVKTGDIVQGLPRIEEILEARKKADTSFNPHSILEYKFRSYLSQGLNVYNASRLSILEIQLLLVKEVQHVYQSQGVYISDKHIEVIVKQMTSKVKVENGGDTGYLPGELIELYKVELVNNSLKIRYKKQASYYPILLGITKASLNTESFISAASFQETTKVLTEAAINGKIDQLRGLKENVIIGRLIPA 1161

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BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1MIS3_9FLOR (DNA-directed RNA polymerase subunit beta'' n=2 Tax=Vertebrata TaxID=1261581 RepID=A0A1Z1MIS3_9FLOR)

HSP 1 Score: 724 bits (1870), Expect = 1.560e-244
Identity = 479/1123 (42.65%), Postives = 526/1123 (46.84%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MAD LKDLGFYYATKAGISLSLEDLRIPP+KQ+LLESTF SIQ TDKRYKRGEITAVERFQKVIDTWNYASDTLKQ VI+YFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIF+NFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREY+CKTSR I++EEM+DNQ++LISL Q+LLGRVLAE+LID +SN+++AK N CID ++LEKIE+L + N+LVRSPLTCSS+RSICQLCYGWNLAH ++VDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  L+V +N YIYAGD I  ++ +NVSG I+SI++++V+IR+GQPYLIS GSL+HV NSGLIQKGENIATLIFER KTGDIVQGLPRIEEILEARKKVD SFNPH+ILEYKFRSY+SQGL++YNA+RLSVLEIQLLLVKEVQ VYQSQGVYI+DKHIEVIVKQMTSKVKIENGGDT YLPGELIEL KVE++N S + S K  A YYPILLGITK+SLNTESFISAASFQETTKVLTEAAI GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADRLKDLGFYYATKAGISLSLEDLRIPPSKQELLESTFKSIQDTDKRYKRGEITAVERFQKVIDTWNYASDTLKQQVIDYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFHNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYNCKTSRAIIIEEMVDNQKILISLQQSLLGRVLAENLIDYNSNQVIAKVNECIDTNLLEKIEKLQIHNLLVRSPLTCSSTRSICQLCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELSHNIISDVDGIVCYPPNIILKPSRNRYGDNVQLVINDSFINITLSDNNYKTFFVLKNSLLLVNDQDIIKKGQIISEYPVDNKLSTERAQKSVVADFAGSIHINNDYNINVGSKPIDNSIVVWILSGEVYNLPKSSTLLISQNQAIEKNDLLARTNLLNETEGKIHIIKDKFTSPKILLVTSSKVYTNVKVFYELLNDYKRYFLQTENNDKFLLKCHPNKKIVDQQIIGDLISNAYKTKTGGIIKYLDLSVIKISDQDIYDIYDSGYILWIPEETHIVNKDVSLLLVENLSFIEIGAEIIQNVFANTTGFLEIIEKDGIIREIVIKPGRLIKLNLNDFVLEKYRGFLRPGEVLFNSISSDKLVYWEYIKIASNHFILLRPVVIYSLPCKDLILKFSDNSFATDFVNLKMVRRTYFKDGERIKSISGINLVSTHLIIEFKMNTPNMKCYMQLQSLKSKLEDSSFFIKFITADFLAIKDSFFSKNYGLYSKTSILISDGQHVKSNSIICQTDIFSSLSGTIGYIEKSSSANCRIMIISKSNTSIFNIKNHSSLKVNINSYIYAGDEITQDLISNVSGLILSINKDEVIIRIGQPYLISHGSLLHVNNSGLIQKGENIATLIFERVKTGDIVQGLPRIEEILEARKKVDISFNPHSILEYKFRSYLSQGLNVYNASRLSVLEIQLLLVKEVQKVYQSQGVYISDKHIEVIVKQMTSKVKIENGGDTRYLPGELIELHKVEIINNSLKMSQKKQASYYPILLGITKASLNTESFISAASFQETTKVLTEAAISGKIDQLRGLKENVIIGRLIPA 1161

[Close]

BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1MS44_9FLOR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Kapraunia schneideri TaxID=717899 RepID=A0A1Z1MS44_9FLOR)

HSP 1 Score: 724 bits (1868), Expect = 2.610e-244
Identity = 478/1119 (42.72%), Postives = 528/1119 (47.18%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MAD+LKDLGFYYATKAGISLSLEDLRIP +KQKLLESTF +IQ TDKRYKRGE+TAVERFQKVIDTWN ASD LKQ+VIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADP+GQIIDLPIF+NFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVI+REYDCKTSRG+LVEEM+D+ ++LISL+Q+LLGRVLAEDLIDL+  KI+A++N CIDN VLEKIE+L+L N+LVRSPLTCSSSRS+CQLCYGWNLAH KVVDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ++VK+N YI AGD I  ++ ++VSG I+ I+++KV+IRVGQPYLISSGSL+HV N  LIQKGENIATLIFER KTGDIVQGLPRIEEILEARKKVDTSFNPH ILEYKFRSY+SQG+S+YN+ARLS+LEIQL+LVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDT+YLPGEL+EL KVELVN S +   K+ A YYP+LLGITK+SLNT+SFISAASFQETTKVLTEAAI+GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADNLKDLGFYYATKAGISLSLEDLRIPSSKQKLLESTFQAIQDTDKRYKRGEVTAVERFQKVIDTWNDASDKLKQEVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPEGQIIDLPIFHNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIIREYDCKTSRGVLVEEMVDSNKILISLSQSLLGRVLAEDLIDLNDKKIIARSNTCIDNYVLEKIEKLNLRNVLVRSPLTCSSSRSVCQLCYGWNLAHGKVVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELSHNITSTIDGIVLYPNNINLISSRNRHGDIVQKLCGDSFVNVISKNGDSKTFFLLKNSLLVVKNSQKIKKGEVLAEHPIDNQLSTEKAQKSVIADFSGSVNIDNIKDISSISDSLVVWILAGEVYSLPQFSNLLVVKDQAIKNHDLLAQTNLRNPTEGKIHIIQDKINVPKILLITSSKTYTNIKVISESLHDYKRYFLHTENHDKFLLKAFPNKKIIDQQIIGDLISNAYKTKTGGIIKYLDLSLTKASDKEFYDIHNSGYILWIPEETHIVNKDLSLLLVKNLTFIDVGTEIIQNIFANNTGFLEIVEKDGIIREIVIKPGKLVKLNLSNINLEKYRGFLRPGEILFNCITTDKLVYWEYLKIAKNNFVLLRPVVIYSLPSKNLFLQFSPSSFSTNFINLKMVRRTFFRDGERIKSVSGVNLVFTHLIIDFKRNLKNIKCYMQFQPLNTNNNNAVFLVKFITADFLTIKDSFFRKNYGLYSKTSILVNDGQYVQSNSIICQTDIFSSIDGTIGYIEKSSNTNFRIMIISEANTVTIPLEDNCIIQVKVNSYIRAGDLITKSIVSSVSGLILVINKDKVIIRVGQPYLISSGSLIHVNNGSLIQKGENIATLIFERLKTGDIVQGLPRIEEILEARKKVDTSFNPHIILEYKFRSYLSQGISVYNSARLSILEIQLMLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTDYLPGELVELHKVELVNSSLELENKNQAVYYPVLLGITKASLNTDSFISAASFQETTKVLTEAAINGKIDQLRGLKENVIIGRLIPA 1157

[Close]

BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A8E6L352_9FLOR (DNA-directed RNA polymerase n=1 Tax=Erythrocystis saccata TaxID=2822695 RepID=A0A8E6L352_9FLOR)

HSP 1 Score: 718 bits (1854), Expect = 3.670e-242
Identity = 476/1121 (42.46%), Postives = 531/1121 (47.37%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MAD+LKDLGF+YATKAGISLSLEDLRIPP+KQKLL+STF SIQ+TD RYKRGEITAVERFQKVIDTWN ASD LKQ+VIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDV+QDVI+REYDCKT+RGILVEEMIDNQ VLISL Q+LLGRVLAE+LID +S KI+A +N CI+N++LEKIE L+L+++L+RSPLTCSS +SICQLCYGWNLAH K+VDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                L+VK N +IYAGD+I +++ ++VSG+IISID+ +V+IR+GQPYLISSGSL+HV +S LIQKGENIATLIF+ FKTGDIVQGLPRIEEILEARKKV+TSFNPHA+L+YKFRSY+SQGL+IYN++RLS+LEIQ+LLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIE+GGDT+YLPGEL+ELQKVELVN S +   K  A YYP+LLGITK+SLNTESFISAASFQETTKVLTEAAI GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADNLKDLGFHYATKAGISLSLEDLRIPPSKQKLLKSTFESIQNTDHRYKRGEITAVERFQKVIDTWNDASDKLKQEVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIREYDCKTNRGILVEEMIDNQEVLISLNQSLLGRVLAENLIDFNSGKIIASSNQCINNEILEKIEILNLSSVLIRSPLTCSSVKSICQLCYGWNLAHGKIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELSRNIITDRDSVVSYPNNINLISSRNRYGDNVQKLQGDSFINLISADGHSKTLFLLKNSLLLVKDLEQIKKGQVIGEYPIDNNLSSEKAQKSVVADFSGSVHIDNFNNNFNSFINSVSSSTIVWILSGEVYSLPQFSKLLIYKDQLIRKNDLIASTDLCNDIAGKIHIINHNFTIPKILLITSSKTYVNIKVVPQIVNDYRRYFLYTENNDKFLLKLSPNKKITNYQIIGDLISNSYKTKTGGIIKYLDLLVTKSSDQDCYDIYNSGYILWIPEETHIVNKDLSLLLVKNLSFIEIGTEIIQNVFANNTGFLEISEKDGIIREIVIKPGKLIELNLNNETLEKYRGFLRPGEILCNYITTDKLVYWEYIKITEYDFILLRPVIIYALPNKNLLLKYSESSFSTDFINLKMIRRTFFRDGERIKSVSGVNLVFTHLIIEFKDSLKNIKCYMQLQNSKNNLAFSLKFITADFLAIKDSFFGQDAGLYSKTSILVNDGSYVQANSIICQTYIFSSIRGRIGYIEKTNNTNFRIMIIGAYNTISTKILDTSLLKVKSNTFIYAGDKITNDITSSVSGFIISIDKGEVIIRLGQPYLISSGSLIHVIDSSLIQKGENIATLIFDHFKTGDIVQGLPRIEEILEARKKVETSFNPHAVLDYKFRSYLSQGLNIYNSSRLSILEIQILLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIESGGDTDYLPGELVELQKVELVNKSLKLKNKKEALYYPLLLGITKASLNTESFISAASFQETTKVLTEAAISGKIDQLRGLKENVIIGRLIPA 1159

[Close]

BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A0B5W2S7_9FLOR (DNA-directed RNA polymerase n=1 Tax=Vertebrata lanosa TaxID=1261582 RepID=A0A0B5W2S7_9FLOR)

HSP 1 Score: 716 bits (1848), Expect = 2.670e-241
Identity = 474/1123 (42.21%), Postives = 526/1123 (46.84%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MAD LKDLGFYYATKAGISLSLEDLRIPP+KQ LL+STF SIQ TDK YKRGEITAVERFQKVIDTWNYASDTLK+ VI+YFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLM+DPQGQIIDLPIF+NFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSR I++EEM+DNQ++LISL Q+LLGRVLA+DLI+ +SNK+VAKAN CID D+LE+I++L + N+LVRSPLTCSS+RSICQLCYGWNLAH ++VDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  LRV  N YIYAGD I  ++ +NVSG I+ I +++++IR+GQPYLIS+GSL+HV  SGLIQKGENIATLIFER KTGDIVQGLPRIEEILEARKKVDTSFNPH+ILEYKFRSY+SQGL++YNA+RLS+LEIQLLLVKEVQ VYQSQGVYI+DKHIEVIVKQMTSKVKIENGG++EYLPGELI+L+KVEL+N S + S K PA YYP+LLGITK+SLNTESFISAASFQETTKVLTEAAI GKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADRLKDLGFYYATKAGISLSLEDLRIPPSKQDLLKSTFKSIQDTDKLYKRGEITAVERFQKVIDTWNYASDTLKKQVIDYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMSDPQGQIIDLPIFHNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRAIILEEMVDNQKILISLYQSLLGRVLAQDLINYNSNKLVAKANQCIDTDLLEQIKKLQIRNVLVRSPLTCSSTRSICQLCYGWNLAHGRIVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGQLSHNIISDVDGVVCYPPNIVLKPSRNRYGDNVKLVINDSFINITLSDSSQKTFFVLKNSLLLVNDQYFIKKGQIISEYPVDNKLSTEKAQKSVVADFSGSIHINNDYIINAESKPIDESIVVWILSGEVYSLPKLSTLLMSKNQFIEKNDLLARTNLFNDKEGKIHIIKDKFTSPKILLVTSSKVYTNVKVFYEIFNDYRRYFLQTENNDKFFLKCNPNKKIVDQQIIGDLISNAYKTKTGGIIKYLDLSLVKISDQDIYNIDDSGYILWIPEETHIVNKDVSLLLVKNLSFIDIGAEIIQNVFANTAGFVEVVEKDGIIREIVIKPGRLIKLNLNDFTLEKYRGFLRPGELLFNYVTSDKLVYWEYIKIVSNHFILLRPVVIYSLPCKDLTLKFSYNSFATDLINLKMVRRTYFRDGERIKSISGINLVSTHLIVEFKENTPNMKCYMQLHSIKPKPDDSSFLIKFITADFLAIKDSSFSKNYGLYSKTSILISDGQYVKSNSIICQTDIFSSISGTIGYIEEDGSANCRIMIISKSNTSILKIQNFSSLRVSPNSYIYAGDNITQDIVSNVSGLIMDIKKDEIIIRIGQPYLISTGSLLHVNQSGLIQKGENIATLIFERVKTGDIVQGLPRIEEILEARKKVDTSFNPHSILEYKFRSYLSQGLNVYNASRLSILEIQLLLVKEVQQVYQSQGVYISDKHIEVIVKQMTSKVKIENGGNSEYLPGELIDLRKVELLNNSLKISRKKPALYYPMLLGITKASLNTESFISAASFQETTKVLTEAAISGKIDQLRGLKENVIIGRLIPA 1161

[Close]

BLAST of Gvermi13664.t1 vs. uniprot
Match: A0A1Z1M9R3_9FLOR (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Polysiphonia sertularioides TaxID=945028 RepID=A0A1Z1M9R3_9FLOR)

HSP 1 Score: 714 bits (1844), Expect = 1.300e-240
Identity = 473/1125 (42.04%), Postives = 528/1125 (46.93%), Query Frame = 0

Query:    1 MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYKRGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGARANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRVLISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNILVRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLTM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRVKLND-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGSLVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSFNPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYIADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKSPAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 561
            MAD LKDLGF+YATKAGISLSLEDLRIPP+KQ LL+STF SI+ TD+RYKRGEITAVERFQKVIDTWNYASDTLK++VI YFK TDPLNSIYMMAFSGARANISQVKQLVGMRGLM+DPQGQIIDLPIF+NFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQD+IVR+YDCKTSRGIL+EEMIDN++VLISL Q+LLGRVLAED+ID  S KI+AK N CID ++LEKIE+L+L+NIL+RSPLTCSS+RSICQLCYGWNLAH K+VDLGEAVGIIAAQSIGEPGTQLTM                                                                                                                                                                                                                         L+ + ND                                                                                                                                                                                                                                                                                                                                                           YIY+GD+I + + +++SG ++S+D+E++VIR+GQPYLIS GSL+HVT++GLIQKGENIATLIFER KTGDIVQGLPRIEEILEARKKVDT+FNPH ILE+KFRSY+SQGLSIYNA+RLS+LEIQLLLVKEVQSVYQSQGVYI+DKHIEVIVKQMTSKVKIENGG+T YLPGELI+LQKVE VN S +   K  A YYP+LLGITK+SLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA
Sbjct:   39 MADRLKDLGFHYATKAGISLSLEDLRIPPSKQSLLKSTFKSIEETDRRYKRGEITAVERFQKVIDTWNYASDTLKREVIAYFKHTDPLNSIYMMAFSGARANISQVKQLVGMRGLMSDPQGQIIDLPIFHNFREGLTITDYFISSYGARKGLVDTALRTADSGYLTRRLVDVAQDIIVRDYDCKTSRGILIEEMIDNEKVLISLGQSLLGRVLAEDIIDFFSQKIIAKVNQCIDTNLLEKIEKLNLSNILIRSPLTCSSTRSICQLCYGWNLAHGKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGELSRHLVSEYSGFVCYPENINLIYSRNMYGDNVQLVKNDTFISIVTENNLKKQVFILKESLLLVKNSEYIEKGQAISEYPLNNKLSTEKAQKSVVADFAGSIHILKDTSFYKSNNSNSHSVVWILSGEVYNLPKISNLLISKGQFIQKNELLARTNLCNDIEGKIHIINNMNNKLVSPKVLLITSCKIYTNLIAVSEVVNDYKRYFLKTENNDKFLLKFPLNKKILDQQVIADLVSNAYKTKTGGIIKYLDLSISKILDQDTYNIENSGYILWIPEETHVVNKDISLLLVKNLSFIDVGTEIIQNIFASNTGFLEISEKDGIIRELVIKPGRLIKLNSNNIELDKYRGFLRPGEKLFNFITSDKLVYWEYLKISQNHFILLRPVIIYSLPSKNILLKFSDNSFATDFVDLKMVRRTFFKDGERIKSVSGVNLVFTHLILEIKKTIHNMKCYMQLQSNNSILNSSSFLIKFITADFLSIKESFFSKNYGLYSKTSILVKNGQHVESNSVICQTNIFSKISGEVAYVEETSSTNRRIMLIGDSNIAKIKFSPTCVSTVIPNSYIYSGDKIAEGINSSISGLVLSVDKEEIVIRIGQPYLISVGSLIHVTDTGLIQKGENIATLIFERLKTGDIVQGLPRIEEILEARKKVDTAFNPHFILEHKFRSYLSQGLSIYNASRLSILEIQLLLVKEVQSVYQSQGVYISDKHIEVIVKQMTSKVKIENGGNTNYLPGELIDLQKVEFVNNSLKLQLKQEASYYPVLLGITKASLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLKENVIIGRLIPA 1163

The following BLAST results are available for this feature:

BLAST of Gvermi13664.t1 vs. uniprot

BLAST of Gvermi13664.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1Z1MHS1_MELHR	3.000e-293	49.55	DNA-directed RNA polymerase subunit beta'' n=1 Tax...	[more]
A0A1Z1MB63_9FLOR	8.060e-251	43.68	DNA-directed RNA polymerase subunit beta'' n=1 Tax...	[more]
A0A1Z1ME58_9FLOR	1.240e-246	43.19	DNA-directed RNA polymerase subunit beta'' n=1 Tax...	[more]
A0A1Z1MAA9_9FLOR	1.280e-246	43.33	DNA-directed RNA polymerase subunit beta'' n=1 Tax...	[more]
A0A1Z1MAJ9_9FLOR	5.520e-245	42.65	DNA-directed RNA polymerase subunit beta'' n=1 Tax...	[more]
A0A1Z1MIS3_9FLOR	1.560e-244	42.65	DNA-directed RNA polymerase subunit beta'' n=2 Tax...	[more]
A0A1Z1MS44_9FLOR	2.610e-244	42.72	DNA-directed RNA polymerase subunit beta'' n=1 Tax...	[more]
A0A8E6L352_9FLOR	3.670e-242	42.46	DNA-directed RNA polymerase n=1 Tax=Erythrocystis ...	[more]
A0A0B5W2S7_9FLOR	2.670e-241	42.21	DNA-directed RNA polymerase n=1 Tax=Vertebrata lan...	[more]
A0A1Z1M9R3_9FLOR	1.300e-240	42.04	DNA-directed RNA polymerase subunit beta'' n=1 Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 564..582 score: 50.61 coord: 733..744 score: 42.95 coord: 595..604 score: 57.54 coord: 754..768 score: 54.36 coord: 716..733 score: 43.5 coord: 645..662 score: 50.0
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 567..782 e-value: 2.9E-90 score: 301.2
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 567..781 e-value: 1.46305E-98 score: 301.808
IPR007083	RNA polymerase Rpb1, domain 4	PFAM	PF05000	RNA_pol_Rpb1_4	coord: 54..123 e-value: 7.8E-14 score: 51.5
IPR007081	RNA polymerase Rpb1, domain 5	PFAM	PF04998	RNA_pol_Rpb1_5	coord: 135..301 e-value: 4.2E-37 score: 128.0
IPR007081	RNA polymerase Rpb1, domain 5	PFAM	PF04998	RNA_pol_Rpb1_5	coord: 428..518 e-value: 3.4E-10 score: 39.8
None	No IPR available	GENE3D	1.10.287.610	Helix hairpin bin	coord: 658..709 e-value: 1.2E-19 score: 72.3
None	No IPR available	GENE3D	1.10.150.390		coord: 518..562 e-value: 1.3E-23 score: 84.3
None	No IPR available	GENE3D	3.40.50.10490		coord: 563..784 e-value: 6.9E-75 score: 252.3
None	No IPR available	GENE3D	1.10.1790.20		coord: 380..517 e-value: 3.8E-39 score: 135.4
None	No IPR available	PANTHER	PTHR19376:SF58	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA''	coord: 501..561 coord: 3..306 coord: 348..413 coord: 423..471
None	No IPR available	CDD	cd02655	RNAP_beta'_C	coord: 276..561 e-value: 1.84244E-97 score: 299.058
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 2..561
IPR012756	DNA-directed RNA polymerase, subunit beta''	TIGRFAM	TIGR02388	TIGR02388	coord: 1..301 e-value: 5.2E-155 score: 515.7
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid	TIGRFAM	TIGR01011	TIGR01011	coord: 562..784 e-value: 9.7E-98 score: 323.9
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid	HAMAP	MF_00291_B	Ribosomal_S2_B	coord: 560..783 score: 42.473934
IPR038120	RNA polymerase Rpb1, funnel domain superfamily	GENE3D	1.10.132.30		coord: 19..159 e-value: 1.4E-54 score: 186.0
IPR045867	DNA-directed RNA polymerase, subunit beta-prime	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 501..561 coord: 348..413
IPR045867	DNA-directed RNA polymerase, subunit beta-prime	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 3..306 coord: 423..471
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00963	RIBOSOMAL_S2_2	coord: 716..740
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 564..575
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 564..784

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_59	contig	ScGOVlb_59:29203..33589 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi13664.t1	Gvermi13664.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_59 29203..33589 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi13664.t1 ID=Gvermi13664.t1|Name=Gvermi13664.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=787bp
MADSLKDLGFYYATKAGISLSLEDLRIPPTKQKLLESTFHSIQSTDKRYK
RGEITAVERFQKVIDTWNYASDTLKQDVIEYFKKTDPLNSIYMMAFSGAR
ANISQVKQLVGMRGLMADPQGQIIDLPIFNNFREGLTITDYFISSYGARK
GLVDTALRTADSGYLTRRLVDVAQDVIVREYDCKTSRGILVEEMIDNQRV
LISLAQALLGRVLAEDLIDLSSNKIVAKANHCIDNDVLEKIEQLDLTNIL
VRSPLTCSSSRSICQLCYGWNLAHSKVVDLGEAVGIIAAQSIGEPGTQLT
MLRVKLNDYIYAGDRICDNVFANVSGYIISIDEEKVVIRVGQPYLISSGS
LVHVTNSGLIQKGENIATLIFERFKTGDIVQGLPRIEEILEARKKVDTSF
NPHAILEYKFRSYISQGLSIYNAARLSVLEIQLLLVKEVQSVYQSQGVYI
ADKHIEVIVKQMTSKVKIENGGDTEYLPGELIELQKVELVNISFQESCKS
PAFYYPILLGITKSSLNTESFISAASFQETTKVLTEAAIHGKIDQLRGLK
ENVIIGRLIPAVSLEELLEAGVHFGHQSRRWNPKMFPYIYTERNGVHIID
LVQTAHLLNSACDFVKQCAKEGKTFLFLGTKRQAAGIVAREALRSNSFYV
NQRWLGGMLTNWVTIKSRVERLNQLEQQDQDGLIDLMPKKEASMMRKELE
RLRKHLNGIRHMKKLPDLVIVVDQKKEATAIQECIKLGVPTICMLDTNCN
PEIIDVPIPSNDDAIRSIKLILSKISDAILEGRNVA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001865	Ribosomal_S2
IPR007083	RNA_pol_Rpb1_4
IPR007081	RNA_pol_Rpb1_5
IPR012756	DNA-dir_RpoC2_beta_pp
IPR005706	Ribosomal_S2_bac/mit/plastid
IPR038120	Rpb1_funnel_sf
IPR045867	DNA-dir_RpoC_beta_prime
IPR018130	Ribosomal_S2_CS
IPR023591	Ribosomal_S2_flav_dom_sf