Gvermi7253.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi7253.t1
Unique NameGvermi7253.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length8
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_5793contigScGOVlb_5793:97..223 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7253Gvermi7253Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_5793 97..223 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7253.t1Gvermi7253.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_5793 97..223 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7253.t1.CDS1Gvermi7253.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_5793 97..107 -
Gvermi7253.t1.CDS2Gvermi7253.t1.CDS2Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_5793 213..223 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7253.t1.exon1Gvermi7253.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_5793 97..107 -
Gvermi7253.t1.exon2Gvermi7253.t1.exon2Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_5793 213..223 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7253.t1.intron1Gvermi7253.t1.intron1Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_5793 108..212 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7253.t1.start1Gvermi7253.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_5793 221..223 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi7253.t1 ID=Gvermi7253.t1|Name=Gvermi7253.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=8bp
LTERSRMX
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spliced messenger RNA

>Gvermi7253.t1 ID=Gvermi7253.t1|Name=Gvermi7253.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=22bp|location=Sequence derived from alignment at ScGOVlb_5793:97..223- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
CTGACGGAAAGAAGCCGAATGC
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protein sequence of Gvermi7253.t1

>Gvermi7253.t1 ID=Gvermi7253.t1|Name=Gvermi7253.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=8bp
LTERSRMX
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mRNA from alignment at ScGOVlb_5793:97..223-

Legend: polypeptideCDSexonstart_codonintron
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi7253.t1 ID=Gvermi7253.t1|Name=Gvermi7253.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=127bp|location=Sequence derived from alignment at ScGOVlb_5793:97..223- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
CTGACGGAAAGGTATGTGTTCGTGTGTTGTCAAATCACCTGCTTGCCCAC
GATTTGTTGTGTCTTCTAACCCGTGTTCACTTGTGTTTTTGTCGCGCTTG
CCGTACAACGCCACAGAAGCCGAATGC
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Coding sequence (CDS) from alignment at ScGOVlb_5793:97..223-

>Gvermi7253.t1 ID=Gvermi7253.t1|Name=Gvermi7253.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=22bp|location=Sequence derived from alignment at ScGOVlb_5793:97..223- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
CTGACGGAAAGAAGCCGAATGC
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