Gvermi12941.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12941.t1
Unique NameGvermi12941.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length165
Homology
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BLAST of Gvermi12941.t1 vs. uniprot
Match: A0A2V3IQB5_9FLOR (C2H2-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQB5_9FLOR)

HSP 1 Score: 80.5 bits (197), Expect = 1.320e-14
Identity = 47/146 (32.19%), Postives = 75/146 (51.37%), Query Frame = 0 
Query:   31 RFHEPWEISKSLAALQYAISSCAIMEIP---------------MQTEKTSCKIPDSDKNIAEIRDSKMVDCNTVASLIINMLDLTMALLHQEDIDVPFENCLQDSVCGIIRDVHISMKALGEKVLYMQKEVQDLFQAKLLFAKGVP 161
            RF E WEI+ +LAA+QY +S  A  E                  +  +  C     ++++  IR+   +D N+ AS + ++LDL M+L+ +ED+DV FENC     CGI+++VH+S+  +G  V     E+ +L    LL     P
Sbjct:  530 RFSEAWEITGTLAAIQYCVSVAAAHEYDHAKRLKNEGDHNGTCTEENEVMCSSTFDEEDL--IRNYVSLDRNSSASFVRHILDLAMSLVAKEDLDVSFENCTSHVNCGIVKEVHVSLGDIGLLVKRAHNELNELLHQNLLLGNPFP 673
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BLAST of Gvermi12941.t1 vs. uniprot
Match: A0A2V3ILS4_9FLOR (ATP-dependent DNA helicase tlh2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILS4_9FLOR)

HSP 1 Score: 80.1 bits (196), Expect = 1.950e-14
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 0 
Query:   31 RFHEPWEISKSLAALQYAISSCAIMEIP---------------MQTEKTSCKIPDSDKNIAEIRDSKMVDCNTVASLIINMLDLTMALLHQEDIDVPFENCLQDSVCGIIRDVHISMKALGEKVLYMQKEVQDLFQAKLLFAKGVP 161
            RF E WEI+ +LAA+QY +S  A  E                  + ++  C     ++++  IR+   +D N+ AS + ++LDL M+L+ +ED+DV FENC     CGI+++VH+S+  +G  V     E+ +L    LL     P
Sbjct:  566 RFAEAWEITGTLAAIQYCVSVAAAHEYDHAKRLKNEGDQNGTCTEGKEVMCSSTFDEEDL--IRNYVSLDRNSSASFVRHILDLAMSLVAKEDLDVSFENCTSHVNCGIVKEVHVSLGDIGLLVKRAHNELNELLHQNLLLGNPFP 709
The following BLAST results are available for this feature:
BLAST of Gvermi12941.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IQB5_9FLOR1.320e-1432.19C2H2-type domain-containing protein n=1 Tax=Gracil... [more]
A0A2V3ILS4_9FLOR1.950e-1432.19ATP-dependent DNA helicase tlh2 n=1 Tax=Gracilario... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2313991..2314485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12941.t1Gvermi12941.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2313991..2314485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12941.t1 ID=Gvermi12941.t1|Name=Gvermi12941.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=165bp
MLVLVSIQPWYGRENLLLLSMCEENCRKKYRFHEPWEISKSLAALQYAIS
SCAIMEIPMQTEKTSCKIPDSDKNIAEIRDSKMVDCNTVASLIINMLDLT
MALLHQEDIDVPFENCLQDSVCGIIRDVHISMKALGEKVLYMQKEVQDLF
QAKLLFAKGVPVGL*
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