Gvermi12703.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12703.t1
Unique NameGvermi12703.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length505
Homology
BLAST of Gvermi12703.t1 vs. uniprot
Match: A0A2V3ILK2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILK2_9FLOR)

HSP 1 Score: 363 bits (932), Expect = 3.280e-117
Identity = 205/508 (40.35%), Postives = 308/508 (60.63%), Query Frame = 0
Query:    4 DKPDASVEGLSGVYQLLVNTIGAKQTQHIEIEQVNKRCLHNVSTQLEESFAGVTSQITDGLSKTKHIAREVENLPQVMDKERQDLPQRLKFPLLQNIRQRVMTLIAHLHAATEDPVQLYPRLLCGSIPLDPAKITKFSKQHRVLQQLNDMDETISLNDRSLSAPPKSSAEVISKVVSSAQRLSDAVLESVNQLAALENDFEELKQLGATLSQVKEPIADLLNQEEEMYGIVCRLRRMFSPESDSSESASDQEGEAEFG----AGIVDTVRCSSKLLDNAAQSRSVVEGSVSKIRSLTGLFAQQMDSFEQRLEQTCGLLRRLAGVLKQFVANLPRLAREIRQFFVPTGWRALVMRPSDDLMSLLAGIDELRETLPDASALQDAASNATAHSKVIEQMTRMKEHMEELMVIPCKLIDQVQNQQFEAKIVGSVRHTLVSIVDELAVSAGEHVTGGVGNVLG--QMVNGVGNLFPQNKSSSHG-SPGANREQKGVFGSLVDEVRGGLLKAIF 504
            DK  A ++ LSG+  +L       +     +E++N RC   VS  L ES + V + I DGL K K IA  +  LP  + KE +DLP  LK   +  I   V  L+AH  AA EDPV+LYPRL+CGSIP+DPAK+TKF+KQ+RVL++LND ++ I   D+S+S PPKSS EV++K+ SSA+ LS+AVL+  +Q++ LE +F +LK+   TL +V+ PI D+L+Q+EE+YG+  +L  +FS          D +GE +F      G++D V   S +L+   +S+S V+ ++ KI+SL GL  QQ ++   R+E+    L +L  VLK+ +AN+PRL +E+R FFVP+GWRA V+ PS DL+++   I+ L+E LPD  +LQ+++S   A   ++ ++ +MK+H+EEL  IP  ++ +V+ +  + K+V SVR  L+ I +EL  S  E +   +G   G   +   V   FP  KS S   S G N     + G   +    G+ KAIF
Sbjct:    5 DKQTA-IDDLSGLGNILKTIAKNGEVGGATLEEINARCFCAVSVDLGESLSSVQAIIVDGLDKAKRIAHNIRGLPTAVGKEVEDLPDILKLTSISYITSTVWELLAHFQAAAEDPVRLYPRLVCGSIPMDPAKVTKFTKQYRVLERLNDANDQIPCGDKSMSVPPKSSHEVVAKIQSSAETLSEAVLDVASQMSGLEKEFADLKESTKTLLEVQRPIDDILDQQEEVYGMSRKLHAIFSV-----TKTEDIDGERDFDQARCGGVIDMVEECSTVLEGIGRSQSSVQDAIMKIQSLGGLCRQQAETIRTRIEKVEAFLNKLVIVLKKLLANIPRLMQELRHFFVPSGWRACVLTPSQDLLTMFGEIERLKEALPDPDSLQESSSRGLAEGDLVGKLNKMKDHVEELARIPSMVLKKVEEEDLQRKVVESVRRILLRITEELTESTXEEIIDNIGERFGVDDITEKVEQFFPLGKSGSRSDSTGGN--DGALPGLRSNMTASGIFKAIF 504          
BLAST of Gvermi12703.t1 vs. uniprot
Match: R7QGL0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGL0_CHOCR)

HSP 1 Score: 164 bits (414), Expect = 2.490e-41
Identity = 114/463 (24.62%), Postives = 220/463 (47.52%), Query Frame = 0
Query:   10 VEGLSGVYQLLVNTIGAKQTQHIE--IEQVNKRCLHNVSTQLEESFAGVTSQITDGLSKTKHIAREVENLPQVMDKERQDLPQRLKFPLLQNIRQRVMTLIAHLHAATEDPVQLYPRLLCGSIPLDPAKITKFSKQHRVLQQLNDMDETISLNDRSLSAPPKSSAEVISKVVSSAQRLSDAVLESVNQLAALENDFEELKQLGATLSQVKEPIADLLNQEEEMYGIVCRLRRMFSPESDSSESASDQEGEAEFGAGIVDTVRCSSKLLDNAAQSRSVVEGSVSKIRSLTGLFAQQMDSFEQRLEQTCGLLRRLAGVLKQFVANLPRLAREIRQFFVPTGWRALVMRPSDDLMSLLAGIDELRETLPDASALQDAASNATAHSKVIEQMTRMKEHMEELMVIPCKLIDQVQNQQFEAKIVGSVRHTLVSIVDELAV-------------SAGEHVTGGVGNVLG 457
            +E L+  Y  L   +G      +E  I++ N +    V+ ++  + + + +   +G+ + + I   V+ LP  + +    L + + F     I   +  L++ L    +DP  ++PR+ CG +P+DP  I++F K++  ++ LN  D  +  ++RS+   P+S+ +V+  V SS + ++D  L +   L  L    +E++    TL    EPI +LL    ++  +V +L  M       S S S +  + +  +  V  +   S L +     +  +E SV+++R  + L +  + +    L      L  +    ++  AN+PR+ RE+R+FF+PTG++ L +RPS  L+S+L G++ ++E+L         A ++   S  +  +  +K +++EL  IP KL+   Q  +    I  +V   +  + +EL V             S  EH+   VG  LG
Sbjct:    8 LEQLTATYTALAKELGNIGVPGLELIIDKANAKLFETVNDEIASTVSEIKAISEEGIEQLRDILAAVQALPDSLSETISALCKDICFSQYVPISFYITELVSSLQEVVQDPRVIFPRVPCGDMPVDPVLISRFKKRYYCVENLNQNDPNLKQSERSMPMVPESAMDVVVNVTSSFESITDDYLATAKALEQLSGGMQEIQDRFDTLRPAAEPILELLEMNGQINDVVSQLSMMMKT-GIKSTSESPRSLKGQMNSDPVCQITEISCLFEKMGDLKQELEVSVARLRESSDLISSLIANLRDFLSVVLHRLTSILETARRLEANIPRIGRELREFFMPTGFKTLFLRPSATLLSILEGLENIKESLSKPLLDTAKAISSIEESDHVRSVLVVKNNVDELEQIPTKLVLVFQTLKTRQVISIAVEQVISQLRNELRVNVIATTATSLLQGSGLEHIANQVGGQLG 469          
The following BLAST results are available for this feature:
BLAST of Gvermi12703.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ILK2_9FLOR3.280e-11740.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGL0_CHOCR2.490e-4124.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 182..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1071898..1073412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12703.t1Gvermi12703.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1071898..1073412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12703.t1 ID=Gvermi12703.t1|Name=Gvermi12703.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=505bp
MMHDKPDASVEGLSGVYQLLVNTIGAKQTQHIEIEQVNKRCLHNVSTQLE
ESFAGVTSQITDGLSKTKHIAREVENLPQVMDKERQDLPQRLKFPLLQNI
RQRVMTLIAHLHAATEDPVQLYPRLLCGSIPLDPAKITKFSKQHRVLQQL
NDMDETISLNDRSLSAPPKSSAEVISKVVSSAQRLSDAVLESVNQLAALE
NDFEELKQLGATLSQVKEPIADLLNQEEEMYGIVCRLRRMFSPESDSSES
ASDQEGEAEFGAGIVDTVRCSSKLLDNAAQSRSVVEGSVSKIRSLTGLFA
QQMDSFEQRLEQTCGLLRRLAGVLKQFVANLPRLAREIRQFFVPTGWRAL
VMRPSDDLMSLLAGIDELRETLPDASALQDAASNATAHSKVIEQMTRMKE
HMEELMVIPCKLIDQVQNQQFEAKIVGSVRHTLVSIVDELAVSAGEHVTG
GVGNVLGQMVNGVGNLFPQNKSSSHGSPGANREQKGVFGSLVDEVRGGLL
KAIF*
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