Gvermi12836.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12836.t1
Unique Name	Gvermi12836.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	328

Homology

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BLAST of Gvermi12836.t1 vs. uniprot
Match: A0A2V3IZU1_9FLOR (2-methylene-furan-3-one reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZU1_9FLOR)

HSP 1 Score: 368 bits (944), Expect = 3.800e-124
Identity = 198/328 (60.37%), Postives = 248/328 (75.61%), Query Frame = 0

Query:    8 PPLSMYALFLTR-DRTRH----FQLLAGAVPVPPVAPHQLLVEVKAAAVGLRDVAVCKALRALP---GLRNRARAPVPGCALAGVVLRAPQHSEFKPGQAVAALSRFGGAFGPYAALTPSECWRTNLPFADAAVTAGAASAAFQAVRAAAVKPGHTVAIAGVLTATGALIAQTCRLVYGARVVAGVHGLDQKNAACTYADVVIDRTVEKVSSKISHLRIDAVFDVEGRLEQLCRIVKNGGVVIRVLSSVEIVREKRAKRVRRMCQKKNITLRRIEGCIDSKAVESTKNLLHTLQLSAPSGPAFGLKQWGAALRAAEQGVDVGAVLLLH 327
            PP +M ALFLT  D+  H    ++LLAG VPVP    + LL+ VKAAAV  RDVA+C+A R+LP      +    PVPGCAL+GVV+ AP H  F+PGQ VAAL+RFGGAF PYA +   ECW T LPFADAAVTAGAAS AFQAVR AA+K   TVAIAG LTA GALIA+TCRLVYG  V+AGVHG  Q+  A +YA+ V+DR+  KV++++ H  +D  FDVEGRLEQLC++VK GG V+RV+++ E +++ +A+RVR +C  + + L R+EG +D++AV+STKNLL TLQ+ APSGPAFG+KQWG AL AAEQGVDVGAV+LLH
Sbjct:    5 PPSTMNALFLTSSDKASHNNRPYKLLAGPVPVPNAPQNHLLIRVKAAAVDARDVAICRAWRSLPTRPAQTSPPPPPVPGCALSGVVVTAPPHHPFQPGQHVAALTRFGGAFAPYATVHADECWLTRLPFADAAVTAGAASVAFQAVRVAALKGNDTVAIAGTLTAAGALIARTCRLVYGVNVIAGVHGPHQQAVAQSYANCVVDRSRNKVTAQLGHAVVDVAFDVEGRLEQLCKLVKKGGTVVRVIAATETIKQSQAQRVRAICSARRVNLIRVEGRLDARAVQSTKNLLQTLQICAPSGPAFGIKQWGPALTAAEQGVDVGAVVLLH 332

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BLAST of Gvermi12836.t1 vs. uniprot
Match: A0A166LG14_9PEZI (Zeta-crystallin n=2 Tax=Colletotrichum incanum TaxID=1573173 RepID=A0A166LG14_9PEZI)

HSP 1 Score: 65.5 bits (158), Expect = 2.550e-8
Identity = 67/231 (29.00%), Postives = 102/231 (44.16%), Query Frame = 0

Query:   26 QLLAGAVPVPPVAPHQLLVEVKAAAVGLRDVAVCKALRALPGLRNRARAP-VPGCALAGVVLRAPQHSEFKPGQAVAALSRFGGAFGPYAALT--PSECWRTNLP----FADAAVTAGAASAAFQAVRAAAVKPGHTVAIAGVLTATGALIAQTCRLVYGARVVAGVHGLDQKNAACTYADV--VIDRTVEK-----VSSKISHLRIDAVFDVEGRLEQLCRIVKNGGVVI 242
            ++    V  PP  P + L++VKAA V   D    +A       R+  R P V G   +GV+L AP HS F+PG+ V     FGG  G Y+ +   P+      +P    FA+AA  A     ++ A+  A +KPG TV +       G +  Q    + G RV+ G  G  +K A    A     ++ T E      V     H   D VFD  G +++  + + + G ++
Sbjct:   21 EIKVSVVDRPPFRPDEYLIQVKAAGVNFVDTLYMQAKGKHQNNRSLVRPPFVLGLEFSGVILSAPAHSHFRPGERV-----FGGCTGSYSEVISLPASMPLHRIPAKWTFAEAAGIAATLPVSYGALLQAGLKPGQTVLVHAAAGGLGLMAVQVATAI-GCRVI-GTAGSPEKCAIAAKAGAQPCVNYTQEAAWWEHVLKLTDHKGADVVFDPVGLVDRSLKCIAHRGKIL 244

The following BLAST results are available for this feature:

BLAST of Gvermi12836.t1 vs. uniprot

BLAST of Gvermi12836.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IZU1_9FLOR	3.800e-124	60.37	2-methylene-furan-3-one reductase n=1 Tax=Gracilar...	[more]
A0A166LG14_9PEZI	2.550e-8	29.00	Zeta-crystallin n=2 Tax=Colletotrichum incanum Tax...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020843	Polyketide synthase, enoylreductase domain	SMART	SM00829	PKS_ER_names_mod	coord: 20..325 e-value: 0.0034 score: -135.5
None	No IPR available	GENE3D	3.40.50.720		coord: 145..266 e-value: 2.1E-30 score: 107.9
None	No IPR available	GENE3D	3.90.180.10		coord: 29..323 e-value: 2.1E-30 score: 107.9
None	No IPR available	PANTHER	PTHR44154	QUINONE OXIDOREDUCTASE	coord: 29..311
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 126..244
IPR011032	GroES-like superfamily	SUPERFAMILY	50129	GroES-like	coord: 28..159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_425	contig	ScGOVlb_425:1754040..1755023 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12836.t1	Gvermi12836.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_425 1754040..1755023 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12836.t1 ID=Gvermi12836.t1|Name=Gvermi12836.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=328bp
MTEPSPPPPLSMYALFLTRDRTRHFQLLAGAVPVPPVAPHQLLVEVKAAA
VGLRDVAVCKALRALPGLRNRARAPVPGCALAGVVLRAPQHSEFKPGQAV
AALSRFGGAFGPYAALTPSECWRTNLPFADAAVTAGAASAAFQAVRAAAV
KPGHTVAIAGVLTATGALIAQTCRLVYGARVVAGVHGLDQKNAACTYADV
VIDRTVEKVSSKISHLRIDAVFDVEGRLEQLCRIVKNGGVVIRVLSSVEI
VREKRAKRVRRMCQKKNITLRRIEGCIDSKAVESTKNLLHTLQLSAPSGP
AFGLKQWGAALRAAEQGVDVGAVLLLH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020843	PKS_ER
IPR036291	NAD(P)-bd_dom_sf
IPR011032	GroES-like_sf