Gvermi12740.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12740.t1
Unique NameGvermi12740.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length157
Homology
BLAST of Gvermi12740.t1 vs. uniprot
Match: A0A5J6RLB9_GRALE (Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A5J6RLB9_GRALE)

HSP 1 Score: 209 bits (531), Expect = 1.540e-65
Identity = 98/152 (64.47%), Postives = 116/152 (76.32%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVFDAVTRLHHLVPEEEQPELASSA 152
            LGAPYKTSVVRIE+DG GHLELASYK+ QP+E+WMGAYEP LL  LT   L R+P+ACNT F W   +R+Y A SRPGKGCRI+RR    ++YLDS I L +  Y+AWDVGRDP+TD+ VWG  AGPF F  V+RL HLVP+E+   LA SA
Sbjct:   95 LGAPYKTSVVRIENDGHGHLELASYKIKQPDEYWMGAYEPQLLEQLTTDQLLRLPEACNTAFVWDESKRMYTASSRPGKGCRIQRRAKEKETYLDSKITLTDHSYSAWDVGRDPETDELVWGAAAGPFDFQVVSRLDHLVPDEQS--LAISA 244          
BLAST of Gvermi12740.t1 vs. uniprot
Match: R7Q5L5_CHOCR (Phycocyanobilin:Cys-153 beta-phycocyanin lyase, CpcT n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5L5_CHOCR)

HSP 1 Score: 202 bits (514), Expect = 6.210e-63
Identity = 92/143 (64.34%), Postives = 109/143 (76.22%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVFDAVTRLHHLVPEE 143
            LGAPYK+SVV++ H+G GHLEL SYKL  PEEFWM A+EP LL PLTA  L +MP+ACNT++EW P +  Y A SRPGKGCRI R G   ++YLDS IML E  Y AWD+G DP+TD+RVWGT AGPFVF  +  L +LVPEE
Sbjct:   97 LGAPYKSSVVQVVHNGAGHLELVSYKLKDPEEFWMAAHEPELLEPLTADQLLQMPEACNTVYEWSPAKNAYAAYSRPGKGCRICRGGKEKETYLDSKIMLTEAQYVAWDLGLDPETDERVWGTAAGPFVFSPLANLDYLVPEE 239          
BLAST of Gvermi12740.t1 vs. uniprot
Match: A0A1X6NL70_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL70_PORUM)

HSP 1 Score: 145 bits (365), Expect = 3.900e-40
Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = 0
Query:    1 LGAPYKTSVVRI--EHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVFDAVTRLHHLVP 141
            LG PYKTSVV++    DGR  LE  +YK+ + +EFW+G +EP LL  LTA  L +MP  CNT++ W P +RVYRA +RPGK C I R+G    +YLDS  +L+ + Y+ WD+GRDP+TD+RVWG  AGPF F    R    VP
Sbjct:  129 LGNPYKTSVVKVVPTPDGRA-LEFENYKIKEADEFWLGGHEPELLDGLTADRLIKMPACCNTVYTWDPAERVYRAATRPGKECIIVRQGA--TTYLDSTAVLSAEGYSPWDLGRDPETDERVWGGAAGPFDFVPEKRFADDVP 268          
BLAST of Gvermi12740.t1 vs. uniprot
Match: A9BKE0_HEMAN (CpeT-like protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKE0_HEMAN)

HSP 1 Score: 107 bits (267), Expect = 4.990e-26
Identity = 53/130 (40.77%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVF 130
            L  PYK+ V  +E  G   +E+ S+ +  PE+FW G YEP+LL  LT   L    D CN  F++   ++++  +++ GK C I R G  N +YLDS  +L E+ Y++ D+GR+ + D++VWG  AGPFVF
Sbjct:   85 LDEPYKSGVTLLEKKGE-IIEVKSFSIKGPEDFWYGTYEPSLLANLTKDRLVNDKDGCNLEFKYDAKKKLFLGKTKSGKQCIIPREG--NPTYLDSTAVLKENEYSSLDIGRNIENDEKVWGPSAGPFVF 211          
BLAST of Gvermi12740.t1 vs. uniprot
Match: UPI0016830940 (chromophore lyase CpcT/CpeT n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI0016830940)

HSP 1 Score: 93.6 bits (231), Expect = 6.430e-21
Identity = 45/130 (34.62%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVF 130
            L  PY+  V+++      H+E+ +Y + Q E+F+  + +P  L+ L A  L ++P  CN + EW+ +   ++   +PGK C + R+G   ++YLDS+  + E+ + + D GRDP+TD+ +WG+ AGPF F
Sbjct:   61 LNNPYRVRVLKLIETS-SHIEIENYTIKQEEQFYGASRDPKRLQALKADQLEKLPG-CNMIVEWEGNS--FKGHVQPGKACMVFRKG--KNTYLDSSFEIDEEKFISIDRGRDPETDEHIWGSLAGPFYF 184          
BLAST of Gvermi12740.t1 vs. uniprot
Match: A0A1Z4J1H2_9CYAN (Chromophore lyase CpcT/CpeT n=6 Tax=Nostocales TaxID=1161 RepID=A0A1Z4J1H2_9CYAN)

HSP 1 Score: 93.2 bits (230), Expect = 9.930e-21
Identity = 46/130 (35.38%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVF 130
            L  PY+  V+++ + G+ H+E+ +Y + + ++F+  +     L+ LTA  L ++P  CN + +W  H   ++    PGKGC + R+G    +YLDS+  + ED + + D GRDP+TD+ +WG+ AGPF F
Sbjct:   61 LNDPYRLRVLKLVNTGK-HIEIENYSVKEEKKFYGASRNLERLKTLTADDLEKLPG-CNMIVQWTGHN--FKGTVEPGKGCIVVRKGQK--TYLDSDFEIDEDKFISRDRGRDPETDEHIWGSVAGPFYF 184          
BLAST of Gvermi12740.t1 vs. uniprot
Match: A0A0X8WU28_9CYAN (Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A0X8WU28_9CYAN)

HSP 1 Score: 91.3 bits (225), Expect = 5.020e-20
Identity = 46/130 (35.38%), Postives = 73/130 (56.15%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVF 130
            L  PY+  V+++ + G  H+E+ +Y +    EF+  +     L  LT   L ++P  CN + EW  H   +R +  PGK C + RRG   ++YLDS   + +  + + D GRDP+TD+ +WG+ AGPF F
Sbjct:   61 LNDPYRLRVLKLVNAG-DHIEIENYTVKDETEFYGASRNLTQLSKLTGDRLEKLPG-CNMIVEWTGHS--FRGKVEPGKACMVTRRG--KETYLDSEFEIDDQIFISLDRGRDPETDEHIWGSVAGPFHF 184          
BLAST of Gvermi12740.t1 vs. uniprot
Match: K9S5W5_9CYAN (Chromophore lyase CpcT/CpeT n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9S5W5_9CYAN)

HSP 1 Score: 91.3 bits (225), Expect = 5.130e-20
Identity = 46/130 (35.38%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVF 130
            L +PY+  V+++  +G   +E+ +YK+ Q E+++  + +P  L+ L+A  L ++P  CN + EW      ++    PGK C + R+G  N +YLDS   + ++ + + D GRDPQTD+ +WG+ AGPF F
Sbjct:   61 LNSPYRVRVLKLVVNG-DRIEIENYKVKQQEQYYGASRQPHRLQTLSAEGLEKLPG-CNMVVEWTGSS--FKGVVEPGKACMVERKG--NLTYLDSEFEIDDEKFISLDRGRDPQTDEHIWGSVAGPFHF 184          
BLAST of Gvermi12740.t1 vs. uniprot
Match: A0A2T1CMF3_9CYAN (Chromophore lyase CpcT/CpeT n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1CMF3_9CYAN)

HSP 1 Score: 91.3 bits (225), Expect = 5.130e-20
Identity = 47/131 (35.88%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    1 LGAPYKTSVVRI-EHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVF 130
            L  PY+  V+++ E D   H+E+ +Y L   + F+  + +   L+ L+A++L ++P  CN + EW  H   ++    PGK C + R+G    +YLDS   + E  + +WD GRDP+TD+ +WG+ AGPF F
Sbjct:   61 LNVPYRVRVLKLLEKDD--HIEIENYTLKDDKPFYGASRDLPRLQTLSANVLEKLPG-CNMIVEWTGHS--FKGHVEPGKACMVVRKG--KTTYLDSEFEIDEQKFISWDRGRDPETDEHLWGSFAGPFHF 184          
BLAST of Gvermi12740.t1 vs. uniprot
Match: B4VQD5_9CYAN (Chromophore lyase CpcT/CpeT n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VQD5_9CYAN)

HSP 1 Score: 90.1 bits (222), Expect = 1.400e-19
Identity = 46/130 (35.38%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    1 LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHMLRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIMLAEDCYAAWDVGRDPQTDQRVWGTPAGPFVF 130
            L APY+  V+++   G  H+E+ +Y + +PE+F+  + +   L+ LT   L ++P  CN + EW    + ++    PGK C++ R+G   ++YLDS   + E+ + + D GRDP TD+ +WG+ AGPF F
Sbjct:   61 LNAPYRLRVLKLMVVG-DHIEIENYTVKEPEKFYGASRDLNRLQTLTTDQLDKLPG-CNMIVEWTG--KSFQGHVEPGKACKVFRKG--KETYLDSTFEIDENQFISLDRGRDPVTDEHIWGSIAGPFYF 184          
The following BLAST results are available for this feature:
BLAST of Gvermi12740.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6RLB9_GRALE1.540e-6564.47Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID... [more]
R7Q5L5_CHOCR6.210e-6364.34Phycocyanobilin:Cys-153 beta-phycocyanin lyase, Cp... [more]
A0A1X6NL70_PORUM3.900e-4051.75Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A9BKE0_HEMAN4.990e-2640.77CpeT-like protein n=1 Tax=Hemiselmis andersenii Ta... [more]
UPI00168309406.430e-2134.62chromophore lyase CpcT/CpeT n=1 Tax=Microcoleus sp... [more]
A0A1Z4J1H2_9CYAN9.930e-2135.38Chromophore lyase CpcT/CpeT n=6 Tax=Nostocales Tax... [more]
A0A0X8WU28_9CYAN5.020e-2035.38Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria ... [more]
K9S5W5_9CYAN5.130e-2035.38Chromophore lyase CpcT/CpeT n=1 Tax=Geitlerinema s... [more]
A0A2T1CMF3_9CYAN5.130e-2035.88Chromophore lyase CpcT/CpeT n=1 Tax=filamentous cy... [more]
B4VQD5_9CYAN1.400e-1935.38Chromophore lyase CpcT/CpeT n=1 Tax=Coleofasciculu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038672Chromophore lyase CpcT/CpeT superfamilyGENE3D2.40.128.590CpcT/CpeT domaincoord: 1..147
e-value: 1.5E-27
score: 98.7
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 2..130
e-value: 9.2E-24
score: 84.4
IPR010404Chromophore lyase CpcT/CpeTCDDcd16338CpcTcoord: 1..131
e-value: 3.08137E-29
score: 103.548

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1357781..1358251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12740.t1Gvermi12740.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1357781..1358251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12740.t1 ID=Gvermi12740.t1|Name=Gvermi12740.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=157bp
LGAPYKTSVVRIEHDGRGHLELASYKLAQPEEFWMGAYEPALLRPLTAHM
LRRMPDACNTLFEWQPHQRVYRARSRPGKGCRIRRRGDHNDSYLDSNIML
AEDCYAAWDVGRDPQTDQRVWGTPAGPFVFDAVTRLHHLVPEEEQPELAS
SATHPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038672CpcT/CpeT_sf
IPR010404CpcT/CpeT