Gvermi12726.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12726.t1
Unique NameGvermi12726.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length465
Homology
BLAST of Gvermi12726.t1 vs. uniprot
Match: A0A2V3IH87_9FLOR (Serine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH87_9FLOR)

HSP 1 Score: 851 bits (2198), Expect = 1.490e-310
Identity = 415/464 (89.44%), Postives = 437/464 (94.18%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGDKYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDTIPFVRDPPKVKAKGSKKK 464
            MLDINLFREDRGGNPE+VRESQRRRFKKESLVDDVIKWDK+WR+VRYDLDCISKKRNELN QLKEIKIKG+KPETNIDPDGSKEANIK+QK+ L  DE  LKE+L V E ERDTILKSIGNVLHHTVPV  DEE NRVERVWPESGERPAA GK LTHVDLLYMIGGVEY+RGVTCAGSRGYYLMGPAV+LNMAIIQYSLRFLS+RGY  IQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGDKYLIATSEQPICVYHADEWVEE++LPRK+AGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSP+DNASY+MLETMIHNAEEFYQTLGLTYQ ISIVS AMNDAASKK+DLEAWFP ASGGKGEYRELVSASNCTDYQSRKLETRCG+KKMGDTNKRYVHMLNSTLCATTRTICCILETYQ E G+ VPEVL+P LGMD +PFVR+ PK+K K SKKK
Sbjct:    1 MLDINLFREDRGGNPEIVRESQRRRFKKESLVDDVIKWDKQWRAVRYDLDCISKKRNELNAQLKEIKIKGKKPETNIDPDGSKEANIKEQKQTLVADEADLKEKLAVAEHERDTILKSIGNVLHHTVPVAEDEEQNRVERVWPESGERPAAGGKRLTHVDLLYMIGGVEYSRGVTCAGSRGYYLMGPAVMLNMAIIQYSLRFLSERGYNPIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGDKYLIATSEQPICVYHADEWVEEKELPRKYAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNASYDMLETMIHNAEEFYQTLGLTYQTISIVSKAMNDAASKKYDLEAWFPAASGGKGEYRELVSASNCTDYQSRKLETRCGVKKMGDTNKRYVHMLNSTLCATTRTICCILETYQREDGVAVPEVLQPYLGMDFLPFVREAPKIKIKSSKKK 464          
BLAST of Gvermi12726.t1 vs. uniprot
Match: R7Q7E0_CHOCR (Serine--tRNA ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7E0_CHOCR)

HSP 1 Score: 775 bits (2002), Expect = 1.030e-280
Identity = 375/463 (80.99%), Postives = 415/463 (89.63%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGDKYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDTIPFVRDPPKVKAKGSKK 463
            MLDINLFREDRGGNP+LVRESQRRRFK  SLVD+V+KWD EWRSVRYDLDC SK+RN LN ++K+IKIKGR PETNIDPDG+KEA IK  K  LA  E   KERL VIEKERD  LK IGN+LHHTVPV  DEEHNRVER++P SGE P  PGKGLTHVDLL+MIGGVEYARGV+ AGSRGY+L GP V+LN A+IQY+L FL++RGYTA+QPPYFMEK+QMAKCAQLDDFDE+LYKVSGDGDKYLIATSEQP+C YH DEWV+ER+LPRKFAG STNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSP+DN SYEMLETM+ NAEEFYQ++GL+YQVISIVSGAMND+A+KK+D+EAWFPGAS GKGEYRELVSASNCTD+Q+RKLETRCG KKMGDTNKRYVHMLN+TLCA TR ICCILET+QTE GITVPEVLR  +G D IPFVRDPPK+K K SKK
Sbjct:    1 MLDINLFREDRGGNPDLVRESQRRRFKDVSLVDEVMKWDAEWRSVRYDLDCASKERNSLNNEMKQIKIKGRNPETNIDPDGTKEAAIKAAKAELATGEGAKKERLVVIEKERDAALKQIGNLLHHTVPVEKDEEHNRVERMFPPSGELPKLPGKGLTHVDLLHMIGGVEYARGVSTAGSRGYFLKGPGVMLNFALIQYALNFLTERGYTAVQPPYFMEKEQMAKCAQLDDFDEELYKVSGDGDKYLIATSEQPLCTYHVDEWVDERELPRKFAGVSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPDDNLSYEMLETMVKNAEEFYQSIGLSYQVISIVSGAMNDSAAKKYDIEAWFPGASDGKGEYRELVSASNCTDFQARKLETRCGSKKMGDTNKRYVHMLNATLCAVTRVICCILETFQTEEGITVPEVLRAFVGSDFIPFVRDPPKLKVKKSKK 463          
BLAST of Gvermi12726.t1 vs. uniprot
Match: A0A1X6P2W4_PORUM (Serine--tRNA ligase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2W4_PORUM)

HSP 1 Score: 518 bits (1333), Expect = 2.350e-179
Identity = 269/464 (57.97%), Postives = 333/464 (71.77%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLT-----VIEKE--RDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGD-KYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDTIPFVRDPPKV 456
            MLDINLFR ++GGNPELVRESQRRRF+KE +V++VI  D EWR  +Y LD   K  N L  ++K +                     K+   GL  ++  ++ R+      V EKE  RDT+L  IGN++  + PV   E++N VER W E+GE   APGK   HVDLL+MIGGVEY RG   AG+RGY+L GP   LNMA+  Y ++FL+ RG+TA+Q PYFMEK +MAKCAQL+DFDEQLYKVSGDGD KYL+ATSEQP+C YHA E V+ RDLP ++A FST FRKE GSHGRD LGIFRVHQFDK+EQF VT+P+ + S+  +E +I N+EEFYQ LGL Y+V+ IVSG +N AA+KK+DLE W+P +    GEYRELVS SNCTDYQ+R+L TR G KK G+ + R+VHMLNSTLCATTR +CCILE YQT+ G+TVPE LRP++G D  PF R  PKV
Sbjct:    1 MLDINLFRTEKGGNPELVRESQRRRFEKEEVVNEVIAADGEWRRAQYKLDEERKALNALQKRIKGL------------------FKAKEDASGLLAEKGTIEARIAAASAVVGEKEAARDTLLGGIGNLVADSAPVDNSEDNNSVERTWGEAGE---APGKRRNHVDLLHMIGGVEYKRGTAVAGNRGYFLKGPGARLNMALATYGVQFLAARGFTAMQTPYFMEKGEMAKCAQLEDFDEQLYKVSGDGDDKYLVATSEQPMCAYHAAENVDPRDLPTRYASFSTCFRKETGSHGRDTLGIFRVHQFDKVEQFVVTTPDGDESWAEMERLITNSEEFYQGLGLPYRVVGIVSGKLNKAAAKKYDLEGWYPSS----GEYRELVSCSNCTDYQARRLGTRFGHKKAGERDPRFVHMLNSTLCATTRVLCCILENYQTDDGVTVPEPLRPLVGADFFPFTRPAPKV 439          
BLAST of Gvermi12726.t1 vs. uniprot
Match: A0A7S0ZG99_9RHOD (Serine--tRNA ligase (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZG99_9RHOD)

HSP 1 Score: 508 bits (1309), Expect = 6.740e-176
Identity = 263/446 (58.97%), Postives = 332/446 (74.44%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEI--KIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDG-DKYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILG 443
            MLDI LFR ++GGNPE+VRESQRRR+    +VD+VI  D+ WR  ++ +D +   R +LN   KEI  ++K ++  + +       A  K+ K  +A+ E Q+      IE+ERDT LKSIGN++  +V V  +E+ N V R W   GE  +  G  + HVDLL+ I GVEYARGV  AGSRGY+L G   LLN+A+IQY ++FL ++ Y  IQPPYFMEK+ MAKCAQLDDFDEQLYKVSG+G DKYLIATSEQP+C YH +EW++ + LP+K+ GFST FRKE GSHGRD LGIFRVHQF+K+EQF VTSPED  S+E+++ MI NAE FYQ+LG+ Y+V++IVSGA+N+AA+KKFDLE WFP ++     YRELVS SNCTDYQSR+LETR G KKMGD  K+YVHMLNSTLCATTR IC ILE YQT+ G+ VPEVL+P +G
Sbjct:    1 MLDIKLFRGEQGGNPEVVRESQRRRYADPGIVDEVIALDELWRQQKFMVDGL---RKDLNSNSKEIGKRMKAKEDASELT------AKTKEIKAQIAECEAQV----IKIEEERDTKLKSIGNLVPDSVFVSDNEDLNPVVRTW---GEPKSPGGPKMNHVDLLHRIDGVEYARGVNVAGSRGYFLKGNGALLNLALIQYGMKFLIEQDYVPIQPPYFMEKETMAKCAQLDDFDEQLYKVSGEGGDKYLIATSEQPLCAYHLNEWIDPKTLPKKYVGFSTCFRKETGSHGRDTLGIFRVHQFEKLEQFVVTSPEDGISWEVMDAMIENAERFYQSLGIPYRVVNIVSGALNNAAAKKFDLEGWFPAST----TYRELVSCSNCTDYQSRRLETRYGNKKMGDREKKYVHMLNSTLCATTRVICAILENYQTDEGVQVPEVLQPYIG 426          
BLAST of Gvermi12726.t1 vs. uniprot
Match: M2W1W8_GALSU (Serine--tRNA ligase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1W8_GALSU)

HSP 1 Score: 511 bits (1317), Expect = 7.870e-176
Identity = 266/466 (57.08%), Postives = 340/466 (72.96%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPE-SGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDG--DKYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDTIPFVRDPPKVKAKGSKK 463
            MLDIN FR ++GG+P+++ ESQR+RF  E  V  VI+ D+EWR  RY  D +   R +LN   KEI   G+K   N D     E  + + K  ++  E +++E    +E +RDT+LKSIGN++H +V V  DE  N V R W + S E+     KG  HVDLLYMI GVEY +GV+ AG+RGYYL GPAV  N+ +I Y L+FL  +GY  +Q PYFME+D MAKCAQL+DFDEQLYKV+G+G  +KYLIATSEQPIC YH +EW++ + LP ++ GFST FRKE GSHGRD LGIFRVHQF+K+EQFC+T+P+   SY M+E M+H AEEFYQ+L + Y+V++IVSGA+N+AA+KK+DLE WFP +S     +RELVS SNCTDYQ+R+LE R G+KKMGD  K+YVHMLNSTLCATTR ICCILE YQT  GI VPEVL+P +G   +PF R+P K+ A+GS K
Sbjct:   52 MLDINWFRTEKGGDPKVILESQRKRFASEEKVLKVIELDEEWRKNRYQGDQL---RKQLNATSKEI---GQKKRNNEDATELME-KVAEIKNSISVTEKRIEE----LEFQRDTLLKSIGNIVHESVFVSQDESENPVLRQWGDFSSEK-----KGYNHVDLLYMIDGVEYEKGVSVAGNRGYYLKGPAVAFNLGLIHYGLQFLVKKGYLPLQTPYFMERDAMAKCAQLEDFDEQLYKVTGEGTQEKYLIATSEQPICCYHMNEWLDPKTLPLRYVGFSTCFRKETGSHGRDTLGIFRVHQFEKLEQFCITAPDPAVSYAMMEEMMHVAEEFYQSLNIPYRVVNIVSGALNNAAAKKYDLEGWFPASSA----FRELVSCSNCTDYQARRLEVRYGLKKMGDREKKYVHMLNSTLCATTRVICCILENYQTADGIKVPEVLQPFVGSSFLPFKREPLKI-AEGSNK 496          
BLAST of Gvermi12726.t1 vs. uniprot
Match: A0A5J4YVX6_PORPP (Serine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVX6_PORPP)

HSP 1 Score: 499 bits (1286), Expect = 4.650e-172
Identity = 262/458 (57.21%), Postives = 330/458 (72.05%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDG-DKYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCG-IKKMGDTNK-RYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDT-IPFVRDPP 454
            ML++ LFR D+GG+PE VRESQRRRFK   LVD VI+ D+    VR + D + K  NE +  + ++K + +  E  +  D      +   K  +   E + K  +T+    RD  ++ IGN++  +VPV  DE  N+VER W E G   AA G GL HVDLL+ IGGVEY RGVT AGSRGY+L+G  VLLN+A+I Y + FL+ RG+ A+QPPYFME+D MAKCAQLDDFDEQLYKVSGDG DKYLIATSEQP+CVYH DEW+  + LP K+ G ST FRKE GSHGRD LGIFRVHQF+K+EQF V SPE + S+ +++ M+ NAEEFYQ LG+ Y+V++IVSGA+N+AA+KK+DLE WFP ++     YRELVS SNCTDYQ+R+LE R G  KK GD  + ++VHMLNSTLCATTR IC ILE YQT  G+ VPEVL+P +G  + +PFVRD P
Sbjct:    1 MLELQLFRTDKGGDPEKVRESQRRRFKDVGLVDKVIELDEAHLKVRKEADNLRKDMNEKSKMVGKLKKEKKDDEAQVIMD-----QVPAIKNEIKDKEEEAKRLITM----RDETIRMIGNLVPDSVPVSQDENENKVERTWGEPG---AAAGDGLNHVDLLHRIGGVEYERGVTAAGSRGYFLVGDGVLLNLALIHYGVHFLTTRGHIAVQPPYFMERDAMAKCAQLDDFDEQLYKVSGDGGDKYLIATSEQPLCVYHMDEWIAVQSLPLKYVGVSTCFRKETGSHGRDTLGIFRVHQFEKLEQFVVCSPEGDESWTIMDEMLGNAEEFYQALGIPYRVVNIVSGALNNAAAKKYDLEGWFPAST----TYRELVSCSNCTDYQARRLEVRYGQTKKQGDARESKFVHMLNSTLCATTRVICAILENYQTSEGVRVPEVLQPYMGGKSFLPFVRDAP 442          
BLAST of Gvermi12726.t1 vs. uniprot
Match: SYSC_ARATH (Serine--tRNA ligase, cytoplasmic n=19 Tax=Brassicaceae TaxID=3700 RepID=SYSC_ARATH)

HSP 1 Score: 490 bits (1262), Expect = 2.100e-168
Identity = 249/467 (53.32%), Postives = 335/467 (71.73%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGL-THVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGD-KYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDT-IPFVRDPPKVKAKGSKKK 464
            MLDINLFRE++G NPE++RESQRRRF    +VD++IK DKEWR  ++++D   K+ N+LN Q+ ++KIK       I      +   K +++  AK E +++E    ++ +    L+ +GN++H +VPV  DE +N V ++W E  +R + PG  L  HVDL+ ++G  +  RG   AG+RG++L G  ++LN A+I + L FL  RG+T +QPP+FM KD MAKCAQL  FDE+LYKV+G+GD KYLIAT+EQP+C YH DEW+   +LP ++AG+S+ FRKEAGSHGRD LGIFRVHQF+KIEQFC+T P +NAS+EML+ M+ N+E+FYQ L L YQ++SIVSGA+NDAA+KK+DLEAWFP +      +RELVS SNCTDYQ+R+LE R G KK  +  K+YVHMLNSTL AT RTICCILE YQ E G+ +PEVL+P +G +T +PF   P     KG K K
Sbjct:    1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLNKQVAQLKIKKEDASEII------QQTEKNKQDSTAK-EAEVREAYAALKAK----LEQVGNLVHDSVPVDKDEANNLVIKLWGE--KRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLNQALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPNENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSE----TFRELVSCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIPEVLQPFMGGETFLPFKAKPVVADTKGKKSK 450          
BLAST of Gvermi12726.t1 vs. uniprot
Match: V4K406_EUTSA (Serine--tRNA ligase n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4K406_EUTSA)

HSP 1 Score: 488 bits (1255), Expect = 2.420e-167
Identity = 249/467 (53.32%), Postives = 327/467 (70.02%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGL-THVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGD-KYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDT-IPFVRDPPKVKAKGSKKK 464
            MLDINLFRE++G NPE++RESQRRRF    +VD++I  DKEWR  +Y++D   K+ N+LN ++ ++KI G                + QQ E   KD  + +  +          L+++GN++H +VP+  DE +N V + W E  +R A PG+ L  HVDL+ ++   +  RG   AG+RG+YL+G  V LN A+I + L FL  RG+  +QPP+FM KD MAKCAQL  FDE+LYKV+G+GD KYLIAT+EQP+C YHADEW+   +LP+++AG+ST FRKEAGSHGRD LGIFRVHQF+KIEQFC+T P +N S+ ML+ M+ N+E+FYQ L L Y+V+SIVSGA+NDAA+KK+DLEAWFP +      YRELVS SNCTDYQSR+LE R G KK  +  K+YVHMLNSTL AT RTICCILE YQ E G+ +PEVL+P +G +T +PF   P   + KG K K
Sbjct:    1 MLDINLFREEKGNNPEIIRESQRRRFASVEVVDEIISLDKEWRQRQYEVDNFRKEFNKLNKEVAKLKISG-----------GDATQLIQQTEKNKKDSAEREAAVRDAYAALKAKLETVGNLIHDSVPIDNDEANNLVTKTWGE--KRVATPGQKLKNHVDLVELLEIADTKRGADIAGARGFYLVGDGVDLNQALINFGLTFLKKRGFKRLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCSYHADEWIHPTELPKRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPNENDSWAMLDEMMKNSEDFYQALKLPYRVVSIVSGALNDAAAKKYDLEAWFPSSE----TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIPEVLQPFMGGETFLPFKAKPVAAETKGKKSK 450          
BLAST of Gvermi12726.t1 vs. uniprot
Match: M1VJ63_CYAM1 (Serine--tRNA ligase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VJ63_CYAM1)

HSP 1 Score: 487 bits (1254), Expect = 8.090e-167
Identity = 260/484 (53.72%), Postives = 327/484 (67.56%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVW--PESGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKV--------------SGDG-----------DKY-LIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDTI-PFVRDPPK 455
            MLDI LFR ++GGNPELVRESQRRRF    LVD VI+ D+ WR  ++ +D +   R ELN   K +        + +   G+  + +      L +     +     +E+ERD +L+ IGN++H +VPV  DE  NRVER+W  PE  +         +HV+LL  +G  +Y RG   AGSRGY+L+GP V LN+A++QY+L FL +RG+  +QPPYFM  D MA+CAQL DFDEQLYKV              SG G           DKY LIATSEQPIC YH DEW++   LP  +AGFST FRKEAG+HGRDQLGIFRVHQF+KIEQF VTSP D AS+EMLE ++ NAEEFYQ+LG+ Y+++SIVSGA+N+AASKK+DLE W+P +      +RELVS SNCTDYQSR+L TR G+KK GD  KR+VHMLNSTLCATTR ICCI+E YQ E+G+ VP VL+P LG +T+ PFV  P K
Sbjct:    1 MLDIRLFRAEQGGNPELVRESQRRRFADVKLVDRVIELDERWRQAQFRVDAL---RRELNESSKRV--------SGLIKSGADASELISSVADLKRSIPAAEREAAALEQERDALLREIGNLVHESVPVSVDEADNRVERLWGYPELADE-RVKNAHRSHVELLLALGAADYERGARVAGSRGYFLIGPGVRLNLALVQYALNFLRERGFREMQPPYFMTSDAMARCAQLSDFDEQLYKVTVRSRGAAAGEPESSGTGGTNATAAAAEDDKYYLIATSEQPICAYHTDEWLDPSTLPLLYAGFSTCFRKEAGAHGRDQLGIFRVHQFEKIEQFAVTSPLDGASWEMLERLLGNAEEFYQSLGIPYRIVSIVSGALNNAASKKYDLEGWYPASKA----WRELVSCSNCTDYQSRRLLTRYGMKKGGDREKRFVHMLNSTLCATTRVICCIVENYQRENGVEVPAVLQPYLGGETLLPFVNLPQK 468          
BLAST of Gvermi12726.t1 vs. uniprot
Match: A0A2Z6PDF9_TRISU (Serine--tRNA ligase n=9 Tax=Trifolium TaxID=3898 RepID=A0A2Z6PDF9_TRISU)

HSP 1 Score: 484 bits (1246), Expect = 4.870e-166
Identity = 252/465 (54.19%), Postives = 332/465 (71.40%), Query Frame = 0
Query:    1 MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLDCISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQLKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPAAPGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSLRFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGD-KYLIATSEQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFDKIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDAASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDTNKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDTIPFVRDPPKVKAKGSKKK 464
            MLDINLFRE++G NPEL+RESQRRRF    +VD++I  DKEWR  +Y+L+ + K+ N++N ++ ++K  G +  TN+  D S+EA  K     +A+ E + KE L+++  +    L++IGN++H +VPV  DE +N+V R W   GE+   P K   HVDL+ ++G  +  +G   AG RGYYL G  V LN A+I + + FL  R YT +Q P+FM KD M+KCAQL  FDE+LYKV+G+GD KYLIAT+EQP+C YH D+W+    LP ++AG+ST FRKEAGSHGRD LGIFRVHQF+K+EQFC+TSP DN S++M E M+ N+EEFY+ L + Y+V+SIVSGA+NDAA+KK+DLEAWFP +      YRELVS SNCTDYQSRKLE R G KK  +  K+YVH+LNSTL AT RTICCILE  Q E G+ +PEVLRP +G  T    ++ P  +AKG K K
Sbjct:    1 MLDINLFREEKGHNPELIRESQRRRFASVDVVDEIINLDKEWRKRQYELENLRKEVNKINKEVSKLKRAG-EDATNLIAD-SEEAKKK-----IAEKEVEAKEALSLMNSK----LETIGNLIHDSVPVDNDEANNQVVRTW---GEKRVEP-KLKNHVDLVDLLGIADLKKGADVAGGRGYYLKGDGVRLNQALINFGIEFLEKREYTLLQTPFFMRKDIMSKCAQLAQFDEELYKVTGEGDEKYLIATAEQPLCAYHIDDWIHPTQLPLRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWDMHEEMLKNSEEFYKALNIPYRVVSIVSGALNDAAAKKYDLEAWFPASQ----TYRELVSCSNCTDYQSRKLEIRYGQKKSNEQLKQYVHLLNSTLTATERTICCILENNQKEDGVEIPEVLRPFMGGKTFLPFKNQPSNEAKGKKSK 446          
The following BLAST results are available for this feature:
BLAST of Gvermi12726.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH87_9FLOR1.490e-31089.44Serine--tRNA ligase n=1 Tax=Gracilariopsis chorda ... [more]
R7Q7E0_CHOCR1.030e-28080.99Serine--tRNA ligase n=1 Tax=Chondrus crispus TaxID... [more]
A0A1X6P2W4_PORUM2.350e-17957.97Serine--tRNA ligase n=1 Tax=Porphyra umbilicalis T... [more]
A0A7S0ZG99_9RHOD6.740e-17658.97Serine--tRNA ligase (Fragment) n=1 Tax=Timspurckia... [more]
M2W1W8_GALSU7.870e-17657.08Serine--tRNA ligase n=1 Tax=Galdieria sulphuraria ... [more]
A0A5J4YVX6_PORPP4.650e-17257.21Serine--tRNA ligase n=1 Tax=Porphyridium purpureum... [more]
SYSC_ARATH2.100e-16853.32Serine--tRNA ligase, cytoplasmic n=19 Tax=Brassica... [more]
V4K406_EUTSA2.420e-16753.32Serine--tRNA ligase n=2 Tax=Eutrema salsugineum Ta... [more]
M1VJ63_CYAM18.090e-16753.72Serine--tRNA ligase n=1 Tax=Cyanidioschyzon merola... [more]
A0A2Z6PDF9_TRISU4.870e-16654.19Serine--tRNA ligase n=9 Tax=Trifolium TaxID=3898 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..95
IPR002317Serine-tRNA ligase, type1PRINTSPR00981TRNASYNTHSERcoord: 375..391
score: 57.08
coord: 353..369
score: 44.23
coord: 294..307
score: 59.79
coord: 336..349
score: 32.01
coord: 282..294
score: 61.25
IPR002317Serine-tRNA ligase, type1PIRSFPIRSF001529Ser-tRNA_ligasecoord: 1..451
e-value: 2.3E-144
score: 479.1
IPR002317Serine-tRNA ligase, type1TIGRFAMTIGR00414TIGR00414coord: 1..440
e-value: 2.3E-123
score: 410.2
IPR002317Serine-tRNA ligase, type1PANTHERPTHR11778SERYL-TRNA SYNTHETASEcoord: 1..449
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 239..426
e-value: 6.5E-32
score: 110.9
IPR042103Serine-tRNA synthetase, type1, N-terminal domain superfamilyGENE3D1.10.287.40coord: 1..120
e-value: 1.8E-26
score: 94.7
IPR015866Serine-tRNA synthetase, type1, N-terminalPFAMPF02403Seryl_tRNA_Ncoord: 1..122
e-value: 3.7E-19
score: 68.9
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)GENE3D3.30.930.10Bira Bifunctional Protein; Domain 2coord: 121..455
e-value: 1.5E-123
score: 414.1
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)SUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 151..447
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 195..435
score: 20.040789
IPR033729Serine-tRNA ligase catalytic core domainCDDcd00770SerRS_corecoord: 136..440
e-value: 1.31852E-160
score: 453.94
IPR010978Class I and II aminoacyl-tRNA synthetase, tRNA-binding armSUPERFAMILY46589tRNA-binding armcoord: 1..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1225758..1227152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12726.t1Gvermi12726.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1225758..1227152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12726.t1 ID=Gvermi12726.t1|Name=Gvermi12726.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=465bp
MLDINLFREDRGGNPELVRESQRRRFKKESLVDDVIKWDKEWRSVRYDLD
CISKKRNELNGQLKEIKIKGRKPETNIDPDGSKEANIKQQKEGLAKDETQ
LKERLTVIEKERDTILKSIGNVLHHTVPVFADEEHNRVERVWPESGERPA
APGKGLTHVDLLYMIGGVEYARGVTCAGSRGYYLMGPAVLLNMAIIQYSL
RFLSDRGYTAIQPPYFMEKDQMAKCAQLDDFDEQLYKVSGDGDKYLIATS
EQPICVYHADEWVEERDLPRKFAGFSTNFRKEAGSHGRDQLGIFRVHQFD
KIEQFCVTSPEDNASYEMLETMIHNAEEFYQTLGLTYQVISIVSGAMNDA
ASKKFDLEAWFPGASGGKGEYRELVSASNCTDYQSRKLETRCGIKKMGDT
NKRYVHMLNSTLCATTRTICCILETYQTESGITVPEVLRPILGMDTIPFV
RDPPKVKAKGSKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002317Ser-tRNA-ligase_type_1
IPR002314aa-tRNA-synt_IIb
IPR042103SerRS_1_N_sf
IPR015866Ser-tRNA-synth_1_N
IPR045864aa-tRNA-synth_II/BPL/LPL
IPR006195aa-tRNA-synth_II
IPR033729SerRS_core
IPR010978tRNA-bd_arm