Gvermi12898.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12898.t1
Unique NameGvermi12898.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length270
Homology
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BLAST of Gvermi12898.t1 vs. uniprot
Match: A0A2V3J1H5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H5_9FLOR)

HSP 1 Score: 196 bits (499), Expect = 5.280e-59
Identity = 98/183 (53.55%), Postives = 131/183 (71.58%), Query Frame = 0 
Query:   43 YTDSTEIVSSLPEQPKRAARIELSLILENLGVTAALNNILVGCMASNTDTNVTSWGVYGVDRFTPSQVQIEYFCIVAESKSLQFPEVLDTYISSGNLLFCLRKADEGISADANIISGRTVAAPRSGSIISATGSTPGWIAGVLLAVIGAIGALALLAVLLKGEEVYLESEFADFASD--SSGD 223
            + D+ E + SLPEQP RA RI  SLILEN+G T  +N  LV CM+S T+T  ++WG Y +DRFTPSQ+Q++YF +V+E +SL FPE L+ YI SG LL+C R  + G S D  I+SGR V APRSGSI+S+ GSTPGW  GV+  V+ ++G LAL+  ++KGE++Y ESE+ +F  D   SGD
Sbjct:   10 FEDNREALQSLPEQPNRAVRIVFSLILENIGFTEKVNAGLVECMSSETNTTQSTWGAYQMDRFTPSQIQVQYFSLVSEQESLDFPERLNRYIESGKLLWCFRDVNRGTSEDVMILSGRKVTAPRSGSIVSSAGSTPGWAIGVVFGVVASVGILALIVTVIKGEQIYPESEYEEFGKDMQKSGD 192
The following BLAST results are available for this feature:
BLAST of Gvermi12898.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1H5_9FLOR5.280e-5953.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..269
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..269
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
NoneNo IPR availableTMHMMTMhelixcoord: 180..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1985549..1986358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12898.t1Gvermi12898.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1985549..1986358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12898.t1 ID=Gvermi12898.t1|Name=Gvermi12898.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=270bp
MMRNPCIVIIFIFFFSISYSQPLRLKSRDRNISLARIGLRRNYTDSTEIV
SSLPEQPKRAARIELSLILENLGVTAALNNILVGCMASNTDTNVTSWGVY
GVDRFTPSQVQIEYFCIVAESKSLQFPEVLDTYISSGNLLFCLRKADEGI
SADANIISGRTVAAPRSGSIISATGSTPGWIAGVLLAVIGAIGALALLAV
LLKGEEVYLESEFADFASDSSGDEDLEDSRDGEMMVVEDRDGREPKQIPK
DREVKEEPKAVADDKNHEK*
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