Gvermi12805.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A2V3II36_9FLOR (Diaminopimelate epimerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II36_9FLOR) HSP 1 Score: 456 bits (1173), Expect = 9.280e-160 Identity = 215/259 (83.01%), Postives = 237/259 (91.51%), Query Frame = 0
Query: 1 MTAFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPG 259
MTAFRKYHGLGNDFVLIDNRH ++PVL+P EAE VCNRNTGVGADGVIFLLPP+ P+SDFGMRLYNSDGTEPEMCGNGIRCLARFAADLG+ G+ KYVVDTGAGEI+PEME GSE+V+VDMG PILEP+ VPTKL T+ +N YQDVL+ VAG+DWTF CVSMGNPHA+TFVTK+ YDDMDSRLEA GP FENH VFPQRTNTEFV++ +KTEFDMLVWERGAGRTMACGTGACAVLVAAV+TGRA+KDVP IIHLPG
Sbjct: 60 MTAFRKYHGLGNDFVLIDNRHDAAPVLTPVEAEKVCNRNTGVGADGVIFLLPPSNPSSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGLHGKTPGKYVVDTGAGEIVPEMEPGSEEVRVDMGTPILEPQNVPTKLNTTEANGYQDVLKGVAGRDWTFVCVSMGNPHAITFVTKKEYDDMDSRLEAVGPDFENHSVFPQRTNTEFVFERSKTEFDMLVWERGAGRTMACGTGACAVLVAAVLTGRADKDVPVIIHLPG 318
BLAST of Gvermi12805.t1 vs. uniprot
Match: R7QGK7_CHOCR (Diaminopimelate epimerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGK7_CHOCR) HSP 1 Score: 422 bits (1085), Expect = 3.360e-146 Identity = 199/285 (69.82%), Postives = 241/285 (84.56%), Query Frame = 0
Query: 1 MTAFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEG 285
MTAFRKYHG+GNDFV++DNR +P+ +P ++ A+C+RNTGVGADGVIFLLPP + +SDF MRLYNSDGTEPEMCGNGIRCLA+FA DL + ++V+DTGAG IIPE+E GS +VKVDMG P++ P +VPT L TS S Y+ VL +V G DWTFSCVSMGNPHA++FV+KEV+ +MD++LE GPSFE +PVFPQ+TNTE+ +Q +TEFDMLVWERGAGRTMACGTGACAVLVAAV+TGRA+KD P +IHLPGGDLTIEW S +NH+ MTGPA+LVFEG
Sbjct: 43 MTAFRKYHGIGNDFVVVDNRAQKNPLYTPDQSVAICDRNTGVGADGVIFLLPPKRRSSDFAMRLYNSDGTEPEMCGNGIRCLAKFADDLKIPTASPGRFVIDTGAGVIIPEIEQGSSEVKVDMGEPVIIPGEVPTTLDTSESAGYEAVL-NVDGTDWTFSCVSMGNPHAISFVSKEVFLEMDTKLEEVGPSFECNPVFPQKTNTEWAFQRCRTEFDMLVWERGAGRTMACGTGACAVLVAAVLTGRADKDQPTVIHLPGGDLTIEWVSKTNHIMMTGPAELVFEG 326
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA) HSP 1 Score: 305 bits (780), Expect = 6.400e-100 Identity = 156/288 (54.17%), Postives = 196/288 (68.06%), Query Frame = 0
Query: 3 AFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAH--GPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKLA 288
AF+KYHGLGNDF+L+DNRH++ PV+SP +A +C+RN GVG DGVIF LP ++D+ MR+YNSDG+EPEMCGNGIRC+ARF L Y ++TGAG IIP + G V VDMG PILE +VPT L + + + VA QDW +CVSMGNPHAV F+ D++DS L+ H GP FE+HP FP R NTEFV + T M VWERGAG T+ACGTGACA+ VAA++ G+ + ++ LPGGDL IEW +N +MTGPA+LVF G A
Sbjct: 51 AFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP--SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIR-GDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFI-----DNVDS-LDLHHVGPQFESHPEFPARINTEFVEVKSPTHLKMKVWERGAGPTLACGTGACALTVAAILAGKTSERT-CVVTLPGGDLEIEWREENNRCYMTGPAELVFSGDYA 328
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A7S3AC78_9RHOD (Diaminopimelate epimerase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC78_9RHOD) HSP 1 Score: 303 bits (777), Expect = 9.150e-100 Identity = 150/284 (52.82%), Postives = 198/284 (69.72%), Query Frame = 0
Query: 4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
F+KYHG+GNDF+L+DN +S +L+ E+ VC+R+ GVGADGVIF++PP SDF MR+YNSDG+EPEMCGNGIRCLARFA + V + Y +DT AG I+PE+ + V+VDMG P L P ++P+ L + + ++ HV G DW + GNPHAV FV +E + +D LE+ GP +ENH FP RTNTEF+Y + E D LVWERGAGRT+ACGTGACA +VA +TGR + V ++LPGG L IEW NH++MTGPA+LV+EG++
Sbjct: 32 FQKYHGIGNDFILVDNMKSSDTLLTADESVKVCDRHFGVGADGVIFMMPPVNDDSDFSMRIYNSDGSEPEMCGNGIRCLARFAHE--VLDSEKTVYKIDTLAGLIVPEIS--GDMVRVDMGEPELNPPKIPSLL--TPDPDTKEATYHVDGTDWQVVPIGTGNPHAVVFVDQEQFRTLDENLESVGPLYENHETFPARTNTEFIYVKSPEEIDFLVWERGAGRTLACGTGACASVVACSLTGRTGRKVA--VNLPGGRLDIEW-GEDNHMYMTGPAELVYEGEI 306
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A0M1JLS7_9CYAN (Diaminopimelate epimerase n=1 Tax=Planktothricoides sp. SR001 TaxID=1705388 RepID=A0A0M1JLS7_9CYAN) HSP 1 Score: 302 bits (774), Expect = 1.060e-99 Identity = 155/285 (54.39%), Postives = 190/285 (66.67%), Query Frame = 0
Query: 4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKLA 288
F KYHGLGNDF+LIDNR +S P+L+ +A +C+R+ G+GADGVIF LP T P +D+ MR++NSDG+EPEMCGNGIRCLARF ADL R Y ++T AG I P+++ QV VDMG P L ++PT L LE VAGQ W +CV+MGNPH +TFV + LE+ GP FE+HP+FPQRTN EFV M VWERGAG T+ACGTGACA LVA I GR E+ A I LPGG L IEW S+ ++MTGPA+ VF GKL+
Sbjct: 5 FTKYHGLGNDFILIDNRQSSEPILTDVQAVQLCDRHFGIGADGVIFALPATSPDADYKMRIFNSDGSEPEMCGNGIRCLARFLADLQAPSRTPQTYHIETLAGMITPQIQADG-QVTVDMGVPRLTAAEIPTTLMEEDCRVIIQPLE-VAGQTWKVTCVNMGNPHCITFVNNVA----EIALESIGPQFEHHPIFPQRTNVEFVQVVAPDYLKMRVWERGAGITLACGTGACAALVAGFIIGRCERK--ATIELPGGSLVIEWSESNERIYMTGPAQRVFTGKLS 281
BLAST of Gvermi12805.t1 vs. uniprot
Match: UPI001688BF70 (diaminopimelate epimerase n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI001688BF70) HSP 1 Score: 301 bits (772), Expect = 2.440e-99 Identity = 158/288 (54.86%), Postives = 200/288 (69.44%), Query Frame = 0
Query: 3 AFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDS-RLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKLAN 289
AF KYHGLGNDFV+IDNRH+ PVL+P +A VC+RN GVGADGVIF LP + +D+ MR+YNSDG+EPEMCGNGIRCLA+F +LG + + +Y + T G I+PE+ T QV VDMG P L ++PT L AS + ++ VAGQ W +CV+MGNPH +TFV +D+D+ L GP FE+H VFPQRTNTEFV M VWERGAG T+ACGTGACA +VAAV+ GR+E+ A + LPGG L I W ++ NH+ M+GPA+ VF G LA+
Sbjct: 6 AFTKYHGLGNDFVMIDNRHSPEPVLTPEQAVQVCDRNFGVGADGVIFALP-AQEGADYSMRIYNSDGSEPEMCGNGIRCLAKFLHELGAEAEQG-RYRIHTLGGLIVPEL-TADGQVTVDMGEPRLLATEIPTTL---ASEKVVNLPLEVAGQTWQVTCVNMGNPHCITFV-----EDVDAISLAEIGPQFEHHAVFPQRTNTEFVQVVRPDYLKMRVWERGAGPTLACGTGACATVVAAVLNGRSERQ--ATVELPGGPLLIHWSAADNHLHMSGPAQAVFSGTLAS 280
BLAST of Gvermi12805.t1 vs. uniprot
Match: K9TDP4_9CYAN (Diaminopimelate epimerase n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TDP4_9CYAN) HSP 1 Score: 301 bits (770), Expect = 4.740e-99 Identity = 154/288 (53.47%), Postives = 197/288 (68.40%), Query Frame = 0
Query: 4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNC----KYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
F KY GLGNDF+LIDNR P+++P++AE +C+RN G+GADGVIF LPPT+P +D+ MR+YNSD +EPEMCGNGIRCLARF DLGV R + +Y + T AG + +++ QV+VDMG P L ++PT L + +V VAG+ W +CVSMGNPH +TFV E D +D L GP FENHP FP+RTNTEF+ ++ M VWERGAG T+ACGTGACA LVA V+TGR ++ A I LPGG L IEW S ++MTGPA+ VF G++
Sbjct: 5 FTKYQGLGNDFILIDNRQNPEPMITPSQAEQLCDRNFGIGADGVIFALPPTEPDTDYTMRIYNSDASEPEMCGNGIRCLARFLVDLGVPTRSSATGTGEYRIQTLAGVMTLTLKSDG-QVRVDMGLPRLLSSEIPTTL-CPPEEKAVNVPLSVAGKTWDVTCVSMGNPHCITFV--EDVDAVD--LAGIGPQFENHPAFPKRTNTEFIQVMGRSHLKMRVWERGAGATLACGTGACATLVAGVLTGRCDRQ--ATIELPGGPLHIEWSESDGRLYMTGPAERVFSGRI 284
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A087SJN7_AUXPR (Diaminopimelate epimerase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SJN7_AUXPR) HSP 1 Score: 301 bits (772), Expect = 5.780e-99 Identity = 156/287 (54.36%), Postives = 202/287 (70.38%), Query Frame = 0
Query: 4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLK-TSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKE----VYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEG 285
F KY GLGNDF+L+DNRH+++P+++P++A C+R+ GVGADGVIF LPP P SD+ MR+YNSDG+EPEMCGNGIRCLARF A+L + +Y VDT AG I PE+ G +V+VDMG PILE +PT L+ T+ V G++W F+CVSMGNPHA+TF ++ D +D L+ GP FE++PVFP RTNTEFV + + MLVWERGAG T+ACGTGACA +VA V+ GR ++ + LPGG L IEW + N ++MTGPA+LVFEG
Sbjct: 23 FAKYQGLGNDFILVDNRHSATPLVTPSQAAKACDRHFGVGADGVIFALPPQAPDSDYAMRIYNSDGSEPEMCGNGIRCLARFVAELDADAPR--RYRVDTLAGLIQPELLPGG-RVRVDMGEPILEANAIPTTLQPTTPEGAVVKQCLTVDGKEWFFTCVSMGNPHAITFGYQDGTLIQTDSID--LQRVGPLFEHNPVFPARTNTEFVEILSPSHVRMLVWERGAGITLACGTGACATVVAGVLEGRLDRSCR--VDLPGGPLEIEWRQADNRIYMTGPAELVFEG 302
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A540L191_MALBA (Diaminopimelate epimerase n=7 Tax=Maleae TaxID=721813 RepID=A0A540L191_MALBA) HSP 1 Score: 302 bits (774), Expect = 1.500e-98 Identity = 162/290 (55.86%), Postives = 203/290 (70.00%), Query Frame = 0
Query: 4 FRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADL-GVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLKTSASNEYQDVLEH---VAGQDWTFSCVSMGNPHAVTFVTK--EVYDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
F KYHGLGNDF+L+DNR +S P +SP +A +C+RN G+GADGVIF LP T D+ MR+YNSDG+EPEMCGNG+RC ARF A+L +QGR + K V TGAG IIPE++ + VKVDMG PIL+ VPTKL +N+ Q V++ V G W +CVSMGNPH VTF T+ + + +L GP FENH VFP RTNTEFV + M VWERGAG T+ACGTGACAV+VAAV+ GRAE++ + LPGG L IEW +NH++MTGPA++VF G +
Sbjct: 80 FVKYHGLGNDFILVDNRDSSEPKISPEQAAKLCDRNFGIGADGVIFALPGINGT-DYTMRIYNSDGSEPEMCGNGVRCFARFIAELENLQGRHSFK--VHTGAGLIIPEIQEDGK-VKVDMGEPILKASDVPTKLP---ANKDQSVVKSGLDVDGVTWNVTCVSMGNPHCVTFGTEGGQNLKVDELKLADIGPKFENHEVFPARTNTEFVQVFTPSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERN--CTVDLPGGPLQIEWKEENNHIYMTGPAEVVFYGSV 360
BLAST of Gvermi12805.t1 vs. uniprot
Match: A0A2K3DT07_CHLRE (Diaminopimelate epimerase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DT07_CHLRE) HSP 1 Score: 301 bits (770), Expect = 1.670e-98 Identity = 157/289 (54.33%), Postives = 198/289 (68.51%), Query Frame = 0
Query: 3 AFRKYHGLGNDFVLIDNRHTSSPVLSPTEAEAVCNRNTGVGADGVIFLLPPTKPTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVQGRKNCKYVVDTGAGEIIPEMETGSEQVKVDMGAPILEPEQVPTKLK-TSASNEYQDVLEHVAGQDWTFSCVSMGNPHAVTFVTKEV---YDDMDSRLEAHGPSFENHPVFPQRTNTEFVYQHNKTEFDMLVWERGAGRTMACGTGACAVLVAAVITGRAEKDVPAIIHLPGGDLTIEWDSSSNHVFMTGPAKLVFEGKL 287
F KY GLGNDF+L+DNRHTS PV++P +A +C+RN G+G DGVIF LPP T D MR++NSDG+EPEMCGNGIRCLA+F +D+ + KY + T AG I PEM QV+VDMG PILE +VPT L T S Q L V G+ + +CVSMGNPHAV + DD+D L A GP FE + VFP RTNTEFV +++ M+VWERGAGRT+ACGTGACA++VA ++ GR +++ + LPGG L IEW S NH++MTGPA+LVF G+L
Sbjct: 37 TFSKYQGLGNDFILVDNRHTSEPVVTPEQAVKICDRNFGIGGDGVIFALPPVGDT-DLTMRIFNSDGSEPEMCGNGIRCLAKFVSDIDNAAPR--KYKIHTLAGLIQPEM-LADGQVRVDMGTPILEGPKVPTTLAPTQGSTVVQQDLV-VEGKTYKVTCVSMGNPHAVIYSCDGEPIKIDDLDKELAALGPKFERNAVFPARTNTEFVEVISRSHVRMVVWERGAGRTLACGTGACALVVAGILEGRVDRNQVCRVDLPGGPLQIEWRQSDNHIYMTGPAELVFSGQL 320 The following BLAST results are available for this feature:
BLAST of Gvermi12805.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12805.t1 ID=Gvermi12805.t1|Name=Gvermi12805.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=291bpback to top |