Gvermi12860.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12860.t1
Unique Name	Gvermi12860.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	367

Homology

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BLAST of Gvermi12860.t1 vs. uniprot
Match: A0A2V3J175_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J175_9FLOR)

HSP 1 Score: 600 bits (1547), Expect = 1.220e-214
Identity = 299/359 (83.29%), Postives = 327/359 (91.09%), Query Frame = 0

Query:    1 MKGNGAKKEMRMMVLVALAAITSSASLFYALTRPALDAERIESRLRLIEQFARAGADVPPPPAPIVTAVGAA-PSHKRLVFYNRPPKTGSTTVRIAVKRALDERGLTAAKCFNMIEWNEMGLKTIINRRDVDFYGCHTRMTKERYDFVSRLRGGNVTFVTNTREPSNIILSAYLQENRDRKVADITDAAEMEQEIERYKKHVDAYPVDALYRYHGADVPLDKCPAEWIHEDAMRRVAERYEVVIDLSRPEESTAMMEAVTGLRPDFTGRFNERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQYNIIKDRLMQNRCFDEGSGGFALCEKAVLHKDQIMERSRKESYAARDELLKM 358
            MK    ++EMRM+ LVALAA+ S+ SLFY+L+RPALD ER+ESRLRLIEQ+ARAGADVPPPPAPIVT V +A  S KRL+FYNRPPKTGSTTVRIAVKRALDER + AAKCFNMIEWNEMGLKTII+RRDVDFYGCHTR+T ERYDFVSRLRGGNVTFVTNTREPSNI+LSAYLQ NRDR VADITD AEM++EIERYK+HV++YPVDALYRYHGA VPL KCP EW+HEDAMR +AERYEVVIDLSRPEESTAMME VTGLRPDFTG +NERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQ+NIIKDRLMQNRCFDE SGG+ LCEKAVL K+ I ERSR+ESYAARD L K+
Sbjct:    1 MKAAAPRREMRMLALVALAAVASTVSLFYSLSRPALDVERLESRLRLIEQYARAGADVPPPPAPIVTTVPSAHSSQKRLIFYNRPPKTGSTTVRIAVKRALDEREMRAAKCFNMIEWNEMGLKTIIHRRDVDFYGCHTRLTTERYDFVSRLRGGNVTFVTNTREPSNIVLSAYLQANRDRNVADITDPAEMDKEIERYKQHVESYPVDALYRYHGASVPLTKCPHEWVHEDAMRAIAERYEVVIDLSRPEESTAMMETVTGLRPDFTGHYNERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQFNIIKDRLMQNRCFDEDSGGYTLCEKAVLKKEDITERSRQESYAARDALRKV 359

[Close]

BLAST of Gvermi12860.t1 vs. uniprot
Match: A0A2V3IZP3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZP3_9FLOR)

HSP 1 Score: 374 bits (959), Expect = 1.990e-125
Identity = 187/298 (62.75%), Postives = 230/298 (77.18%), Query Frame = 0

Query:   64 PIVTAVGAAPSHKRLVFYNRPPKTGSTTVRIAVKRALDERGLTAAKCFNMIEWNEMGLKTIINRRDVDFYGCHTRMTKERYDFVSRLRGGNVTFVTNTREPSNIILSAYLQENRDRKVADITDAAEMEQEIERYKKHVDAYPVDALYRYHGA-DV-PLDKCPAEWIHEDAMRRVAERYEVVIDLSRPEESTAMMEAVTGLRPDFTGRFNERTTDTSGKMLTALKNIDTSHKTCGNELVHKVLMQQYNIIKDRLMQNRCFDEGSGGFALCEKAVLHKDQIMERSRKESYAARDELLKMQ 359
            P++++   +P  KRL+FYNRPPKTGST+VRIA+K AL++  + AAKCFNMIEWNEM L+TIINRR+VDFYGCHTR+  +R+  +S++RGGNVTF+T+TRE S+I+LSAYLQ+ RDR+VADIT   EM++EI RYKK V+ YPVDALY YHGA D+  L  CP  W H  AMRR+AERYE+V+DL + +ES  M+EAVTGL+PD    +NERT   S  ML  L  IDTSHKTCGNELVH+VL  Q+N+IKDRLMQNRCFDEGS    LC++  L  D I ER R ES  ARD L K+Q
Sbjct:   57 PLLSSGAHSPHTKRLLFYNRPPKTGSTSVRIAMKNALNKDNMVAAKCFNMIEWNEMALRTIINRRNVDFYGCHTRLVPDRFRDISQMRGGNVTFMTSTREASDIVLSAYLQDQRDRRVADITGKKEMDEEIARYKKFVEKYPVDALYAYHGAGDIHKLSSCPVSWQHTLAMRRIAERYEIVVDLEKADESAVMVEAVTGLKPDLNLFYNERTKQKS-PMLDKLGAIDTSHKTCGNELVHEVLTMQFNVIKDRLMQNRCFDEGSASAHLCDRIKLTADSIAERGRLESMKARDALKKLQ 353

The following BLAST results are available for this feature:

BLAST of Gvermi12860.t1 vs. uniprot

BLAST of Gvermi12860.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J175_9FLOR	1.220e-214	83.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IZP3_9FLOR	1.990e-125	62.75	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 74..329 e-value: 3.4E-11 score: 44.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 74..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..366
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 26..30
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..366
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 14..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..13
None	No IPR available	TMHMM	TMhelix		coord: 13..32

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_425	contig	ScGOVlb_425:1826314..1827414 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12860.t1	Gvermi12860.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_425 1826314..1827414 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12860.t1 ID=Gvermi12860.t1|Name=Gvermi12860.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=367bp
MKGNGAKKEMRMMVLVALAAITSSASLFYALTRPALDAERIESRLRLIEQ
FARAGADVPPPPAPIVTAVGAAPSHKRLVFYNRPPKTGSTTVRIAVKRAL
DERGLTAAKCFNMIEWNEMGLKTIINRRDVDFYGCHTRMTKERYDFVSRL
RGGNVTFVTNTREPSNIILSAYLQENRDRKVADITDAAEMEQEIERYKKH
VDAYPVDALYRYHGADVPLDKCPAEWIHEDAMRRVAERYEVVIDLSRPEE
STAMMEAVTGLRPDFTGRFNERTTDTSGKMLTALKNIDTSHKTCGNELVH
KVLMQQYNIIKDRLMQNRCFDEGSGGFALCEKAVLHKDQIMERSRKESYA
ARDELLKMQGGEQPKE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase