Gvermi12651.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12651.t1
Unique NameGvermi12651.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length419
Homology
BLAST of Gvermi12651.t1 vs. uniprot
Match: A0A2V3J3C9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C9_9FLOR)

HSP 1 Score: 368 bits (944), Expect = 1.980e-120
Identity = 197/379 (51.98%), Postives = 266/379 (70.18%), Query Frame = 0
Query:    1 MIEIPLRSGIVNAVLEVSLVLIVCPVWCSALINVVNKNTFHRAK-KGHGVRVGEGIPSLFSPAHLLRTRAAGNKLLLLGELFITVIIFWLELGINGKTQLLYAMETKYVLNGATFPDVLPNVNVSRLQPIEGHAVQSRSCFRRVRPNTYELYGLAYTSSQNFKRDNYEVFGFNQSICLDPESVQSSVGIRFVTDFDSIIHPYQMNTTRFKVQTLADTFVKGVLEGTCEASLYGQNSFTVLSPPYGRGRIMVTASKLKRDQFMLEFGGVINLDDKRDSNGNQIIKFDSDSSSCAHLTHTHMTRRTFSVNITTMNTELDVTRLARSTMAFRAS----PYG-----LRVFNAVDFMVFFFFSGDVDSGHDTQQRIGQFQRMQ 369
            MI IP+RSGIVNAVLE  LVLIV P+W +AL+ + N+ TF  A+ KG+ VR+G+ +PS+  P  LLRTRAAGNKLLL+GE+ I ++IFWLELG+NG+TQ  Y ++T+YVLNG  FPDV P  N++RL+ I+G + QSRSCFR+V  +TYELYG++YTS QNF++D    +GFNQS+CL P++V+S VGIRFVTD+DS +  + +NT+RF+   + D      L G+CE SLYG N+FTVL       RIM TA +  +D+F +E GG++NL+   D N   I++ D  +S+C  L +T MTRR FS+ +T MNT+LDV  LAR+ +A+       PY       R +NAVD     FFSG+++S  DT+Q IGQF RMQ
Sbjct:    1 MISIPVRSGIVNAVLEACLVLIVAPIWNNALVKITNRRTFRNARVKGNAVRIGQQLPSISRPLTLLRTRAAGNKLLLIGEIVIAIVIFWLELGVNGETQGEYNLQTRYVLNGGGFPDVAPLSNLTRLRIIKGLSSQSRSCFRQVERDTYELYGVSYTSPQNFEKDVARKYGFNQSLCLGPDNVESGVGIRFVTDYDSDVGEHDLNTSRFRPGRIPDGVEDAPLPGSCEGSLYGTNTFTVLGTYISGSRIMATAIEEDKDRFEIEIGGLVNLE-YDDPNDYTILERDYGTSTCIDLNYTRMTRREFSIKVTAMNTKLDVRGLARAVIAYMNDKTPHPYPEDSGVYRPYNAVDLFTDIFFSGEIESDEDTEQVIGQFDRMQ 378          
BLAST of Gvermi12651.t1 vs. uniprot
Match: A0A2V3IG70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG70_9FLOR)

HSP 1 Score: 328 bits (840), Expect = 5.780e-105
Identity = 178/371 (47.98%), Postives = 252/371 (67.92%), Query Frame = 0
Query:    3 EIPLRSGIVNAVLEVSLVLIVCPVWCSALINVVNKNTFHRAK-KGHGVRVGEGIPSLFSPAHLLRTRAAGNKLLLLGELFITVIIFWLELGINGKTQLLYAMETKYVLNGATFPDVLPNVNVSRLQPIEGHAVQSRSCFRRVRPNTYELYGLAYTSSQNFKRDNYEVFGFNQSICLDPESVQSSVGIRFVTDFDSIIHPYQMNTTRF-KVQTLADTFVKGVLEGTCEASLYGQNSFTVLSPPYGRGRIMVTASKLKRDQFMLEFGGVINLDDKRDSNGNQIIKFDSDSSSCAHLTHTHMTRRTFSVNITTMNTELDVTRLARSTMAFRAS-PYGL-RVFNAVDFMVFFFFSGDVDSGHDTQQRIGQFQRMQ 369
             IP+RSGIVNA+LEV++VL+V P+W  AL  + N  TF +A+ KGHGV+VG+ IP+L  P   L+T A G K LL+GE+ + +IIFWLELG+NG+T+++Y  + +++LNG  FP+V+P   V  LQ I G + +SRSCFRRV  NTYELY +AYTS QNF+R   + +GFN SICLD ++ + +VG+RFV D+  +I  + MNT RF K + + D   +G +  TCE SLYG N++TVL       RIM TA K   ++  LE GG++NL+D  D+N   I   D  +S+CA L +T MTRR FSV +T +N++LD   +AR+  ++    P+G+ R ++AVD M   F+SG++DS  D  Q IGQF++MQ
Sbjct:    2 NIPVRSGIVNAILEVAVVLLVAPIWNKALTKIFNFYTFRKARTKGHGVQVGQQIPTLSDPFTSLKTWAVGTKFLLIGEIALVIIIFWLELGVNGETEMVYHPQKRFILNGGGFPNVIPISKVEHLQMIPGLSSESRSCFRRVGRNTYELYAVAYTSPQNFERYISQAYGFNDSICLDDDNARPTVGVRFVGDYRRVIGEWDMNTKRFTKKERIPDGLGEGFVRNTCEGSLYGMNTYTVLGKYNWGSRIMSTAIKKGENEIELEIGGLVNLEDN-DTNDYSIGYRDYGTSTCAELNYTRMTRREFSVTLTALNSKLDFKNIARALSSYLDYVPHGVYRNYDAVDIMTELFYSGEIDSDEDGSQTIGQFEQMQ 371          
BLAST of Gvermi12651.t1 vs. uniprot
Match: A0A2V3IK59_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK59_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 5.990e-61
Identity = 122/276 (44.20%), Postives = 174/276 (63.04%), Query Frame = 0
Query:   99 LLYAMETKYVLNGATFPDVLPNVNVSRLQPIEGHAVQSRSCFRRVRPNTYELYGLAYTSSQNFKRDNYEVFGFNQSICLDPESVQSSVGIRFVTDFDSIIHPYQMNTTRF-KVQTLADTFVKGVLEGTCEASLYGQNSFTVLSPPYGRGRIMVTASKLKRDQFMLEFGGVINLDDKRDSNGNQIIKFDSDSSSCAHLTHTHMTRRTFSVNITTMNTELDVTRLARSTMAFRAS-PYGL-RVFNAVDFMVFFFFSGDVDSGHDTQQRIGQFQRMQAQ 371
            ++Y  + ++VLNG  FP+V+P   V  LQ I G + +SRSCFRRV  NTYELY +AYTS QNF+R   + +GFN S CLD ++ + +VG+RFV D+  +I  + MNT RF K + + D   +G +  TCE SLYG N++ VL       RIM TA K   ++  LE GG++NL+D  D+N   I   D  +S+CA L +T MT R FSV +T +N++LD   +AR+  ++    P+G+ R ++AVD M   F+SG+ D   D  Q IGQF++MQ Q
Sbjct:    1 MVYHPQKRFVLNGGGFPNVIPKSKVEHLQMIPGLSSESRSCFRRVGRNTYELYAVAYTSPQNFERYISQAYGFNDSTCLDDDNARPTVGVRFVGDYRRVIGEWDMNTKRFTKEERIPDGLGEGFVRNTCEGSLYGMNTYAVLGKYNWGSRIMSTAIKKGENEIELEIGGLVNLEDN-DTNDYSIGYRDYGTSTCAELNYTRMTWREFSVTLTALNSKLDFKNIARALSSYLDYVPHGVYRNYDAVDIMTELFYSGENDE--DGSQTIGQFEQMQVQ 273          
The following BLAST results are available for this feature:
BLAST of Gvermi12651.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3C9_9FLOR1.980e-12051.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG70_9FLOR5.780e-10547.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK59_9FLOR5.990e-6144.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..418
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availableTMHMMTMhelixcoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:25924..45446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12651.t1Gvermi12651.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 25924..45446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12651.t1 ID=Gvermi12651.t1|Name=Gvermi12651.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=419bp
MIEIPLRSGIVNAVLEVSLVLIVCPVWCSALINVVNKNTFHRAKKGHGVR
VGEGIPSLFSPAHLLRTRAAGNKLLLLGELFITVIIFWLELGINGKTQLL
YAMETKYVLNGATFPDVLPNVNVSRLQPIEGHAVQSRSCFRRVRPNTYEL
YGLAYTSSQNFKRDNYEVFGFNQSICLDPESVQSSVGIRFVTDFDSIIHP
YQMNTTRFKVQTLADTFVKGVLEGTCEASLYGQNSFTVLSPPYGRGRIMV
TASKLKRDQFMLEFGGVINLDDKRDSNGNQIIKFDSDSSSCAHLTHTHMT
RRTFSVNITTMNTELDVTRLARSTMAFRASPYGLRVFNAVDFMVFFFFSG
DVDSGHDTQQRIGQFQRMQAQDDLDTECTQDATIQDRFPPTETAIASATE
YPTDQHHGFWDPKAPKMT*
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