Gvermi12852.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12852.t1
Unique NameGvermi12852.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length302
Homology
BLAST of Gvermi12852.t1 vs. uniprot
Match: A0A2V3J1M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M7_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 2.370e-41
Identity = 93/252 (36.90%), Postives = 134/252 (53.17%), Query Frame = 0
Query:   47 GTSPARPLHRTKCIVYDRPPRTGSSTIGSSLLKCLKQWGYAQPPIPNGKPGVKRASATQHMLRTDLNSSRRALLSRHIYMSEKDIKRIRSRCDDFLYITSTAPMRERLWSAVKHLMADRHGNTT----SVSLDEEKALQLLRNQKFKKGDLRSWLELDAYPYLTENHKRAKVKRKLVPDYVIRKESLAQDLKALLGAFSCNVSFTTQNVHE---DNVEYVGDLFSGMNLPRGDQLYDTLCRAAEQNNLKSLK 291
            G  P+      +C +YDRPPRT S+TIG++L  CL++  + QPP        K+ SA  + +  +L + R+ALLSRH Y++ + +  +R RC    YITS AP+ ERL SA K+ ++  HGN+T     +    EKA    R ++F          L+ YPY+ ++ K   V   LVP+YVIRK  L QDL  LL    C+ SF + NVH    D  + +  + +G      D LY TL R A  +N   L+
Sbjct:   37 GNPPSSQTPSIRCFIYDRPPRTASTTIGTALQSCLRRHHFRQPPRE------KQRSAIPYTIFDNLQTPRKALLSRHFYLNSRTVSLLRKRCSTLFYITSCAPIEERLLSASKYTLSGGHGNSTLDDQQMHAAAEKANSSTRQKRF----------LNHYPYVDDDKKPINVSTPLVPNYVIRKPHLRQDLTKLLQTLQCDTSFVSGNVHRAPADESQILQHITAG-----DDTLYQTLARRALSHNALGLQ 267          
BLAST of Gvermi12852.t1 vs. uniprot
Match: A0A2V3J4P6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P6_9FLOR)

HSP 1 Score: 150 bits (379), Expect = 4.710e-40
Identity = 95/243 (39.09%), Postives = 138/243 (56.79%), Query Frame = 0
Query:   59 CIVYDRPPRTGSSTIGSSLLKCLKQWGYAQPPIPNGKPGVKRASATQHMLRTDLNSSRRALLSRHIYMSEKDIKRIRSRCDDFLYITSTAPMRERLWSAVKHLMADRHGNTTSVSLDEEKALQLLRNQKFKKGDLRSWLELDAYPYLTENH---KRAKVKRKLVPDYVIRKESLAQDLKALLGAFSCNVSFTTQNVHEDNVEYVGDLFSGMNLPRGDQLYDTLCRAAEQNNLKSLKLASTLVR 298
            C++YDRPPRT S+TIG++L KCL+  GY QP    G  G  R+    +MLR  L   R +LL+RH YM+   +  +R+ CD   YITSTAPM+ERLWS VK+    +HGN+   SL+E +    L++ + +   +     L+AYPYL  +     R+ +   + PDYVIRK  L +D+  LL AF C   F ++N+H   +E+   L   + +   D L++ + R A Q N   LK A+   R
Sbjct:   58 CVIYDRPPRTASTTIGNALEKCLEPLGYEQPDW-QGMDG--RSLMVLNMLR--LPFERVSLLARHFYMNSTSLLELRTGCDALFYITSTAPMKERLWSLVKYRQVTKHGNS---SLNETQLFAALQDLRKETVQIEV---LNAYPYLQTHETPINRSTIDT-ITPDYVIRKSQLNEDMSKLLRAFGCETRFVSENIHL--LEHASGL-DKITIDDDDGLHERMLRLARQRNDVGLKKAADFAR 285          
The following BLAST results are available for this feature:
BLAST of Gvermi12852.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1M7_9FLOR2.370e-4136.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4P6_9FLOR4.710e-4039.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..301
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1805759..1806664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12852.t1Gvermi12852.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1805759..1806664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12852.t1 ID=Gvermi12852.t1|Name=Gvermi12852.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=302bp
MVSYKNCRANLKSTAPPLAIAIVVLTASSLYTILTLTRLRRRAQRSGTSP
ARPLHRTKCIVYDRPPRTGSSTIGSSLLKCLKQWGYAQPPIPNGKPGVKR
ASATQHMLRTDLNSSRRALLSRHIYMSEKDIKRIRSRCDDFLYITSTAPM
RERLWSAVKHLMADRHGNTTSVSLDEEKALQLLRNQKFKKGDLRSWLELD
AYPYLTENHKRAKVKRKLVPDYVIRKESLAQDLKALLGAFSCNVSFTTQN
VHEDNVEYVGDLFSGMNLPRGDQLYDTLCRAAEQNNLKSLKLASTLVRDS
S*
back to top