Gvermi12750.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12750.t1
Unique Name	Gvermi12750.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	460

Homology

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BLAST of Gvermi12750.t1 vs. uniprot
Match: A0A2V3IFW9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFW9_9FLOR)

HSP 1 Score: 525 bits (1351), Expect = 1.630e-181
Identity = 260/464 (56.03%), Postives = 333/464 (71.77%), Query Frame = 0

Query:   21 LSTAVELHAAQRSTTTSCQSIRSAMMEAYYAQVGLIRRGLPVRVAQSEFVYAANYYAAYSSYFTYYNLNTTCVWTNLWYNLFDYQNRARWALDYLKQIRILNSEINFLNFTQYPTLPHMDPSDEAYAHDLWFAIDHRLKTTPRGNYVFEDFKFPNNVAILYDPEKDLACSEYQKFGPLTTTNSVPATKALVALGMASIKMYRIGASKPLISQMLQHFVGFSFNGVRCTRTEKESLSIPVRLIEAYSRNLGFIYAS----STKAP--LPTFSVEAFETVFDDEISSLSSYNSWGHTKFAKLVGRYSIPAIVNSVDTFLDDANYQALISA------------SSGSTSTIPDE-------ELDEIDDRFLVNERQVTCAAGYVWLTRETAVTNALEHCCAAVCDTFSLLSTSADPFPHEECCYRCNENHGCPSGLQESDIFDNDNTYVIVPEYGEQSQQTVTMIDI 459
            +S   +L    RS++ SCQ++  +M EA+YAQV LIRRGLPVRV QSE+VYAAN+ A Y SYF Y NLNTTCV++ LWY+LFDY NRA WAL YL+ +R    EINFLNFTQY +LP M  +++     LW  ID +L +TPRG Y ++D  FPNNV +LYDP ++LACSEY KFG +T  ++ PAT   + L M SI+MY+ GA++  I QML HF  ++F+GVRCT  E+  L IP  L + YSRN+G+IY+S    +T  P  LP F+ +AF+++F DEI SL+SYNSWG+ ++AKLVGR SIPAIV+S+DT LD+ N+  L+ +            +SGSTS            ELDE+DD F+V +R  TC+ GY WL+RE  V + LEHCCA VCDTF++L TS DPFPHEECCYRCNE+HGCPSGL E DIFDNDN+++IVPEYG+QSQQTVTM+DI
Sbjct:   20 ISYGFDLETTTRSSSGSCQTLYESMREAFYAQVDLIRRGLPVRVVQSEYVYAANFLAHYDSYFQYRNLNTTCVYSYLWYHLFDYSNRAHWALKYLQSMRGWKPEINFLNFTQYESLPPMAQTEQDVVDGLWHTIDLKLLSTPRGQYGYDDLPFPNNVGVLYDPGQELACSEYNKFGSVTGDHARPATDVYIHLAMCSIQMYQAGANRDAIKQMLSHFAAYAFDGVRCTGDEQADLKIPEILFQNYSRNIGYIYSSIPNKTTGDPVNLPQFTKDAFQSIFADEIQSLTSYNSWGYPEYAKLVGRNSIPAIVDSIDTLLDNQNFDTLMQSPGSSWSGTPMNTASGSTSXXXXXXXXXXXXELDEVDD-FIVLDRTATCSNGYTWLSREIQVQDDLEHCCATVCDTFAMLITSVDPFPHEECCYRCNESHGCPSGLTEQDIFDNDNSFIIVPEYGDQSQQTVTMVDI 482

The following BLAST results are available for this feature:

BLAST of Gvermi12750.t1 vs. uniprot

BLAST of Gvermi12750.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IFW9_9FLOR	1.630e-181	56.03	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..459
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..16

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_425	contig	ScGOVlb_425:1376099..1377478 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12750.t1	Gvermi12750.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_425 1376099..1377478 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12750.t1 ID=Gvermi12750.t1|Name=Gvermi12750.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=460bp
MKVFAFFLSGLLTAFFAGSGLSTAVELHAAQRSTTTSCQSIRSAMMEAYY
AQVGLIRRGLPVRVAQSEFVYAANYYAAYSSYFTYYNLNTTCVWTNLWYN
LFDYQNRARWALDYLKQIRILNSEINFLNFTQYPTLPHMDPSDEAYAHDL
WFAIDHRLKTTPRGNYVFEDFKFPNNVAILYDPEKDLACSEYQKFGPLTT
TNSVPATKALVALGMASIKMYRIGASKPLISQMLQHFVGFSFNGVRCTRT
EKESLSIPVRLIEAYSRNLGFIYASSTKAPLPTFSVEAFETVFDDEISSL
SSYNSWGHTKFAKLVGRYSIPAIVNSVDTFLDDANYQALISASSGSTSTI
PDEELDEIDDRFLVNERQVTCAAGYVWLTRETAVTNALEHCCAAVCDTFS
LLSTSADPFPHEECCYRCNENHGCPSGLQESDIFDNDNTYVIVPEYGEQS
QQTVTMIDI*