Gvermi12768.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12768.t1
Unique Name	Gvermi12768.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	559

Homology

[Close]

BLAST of Gvermi12768.t1 vs. uniprot
Match: A0A2V3IJ83_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ83_9FLOR)

HSP 1 Score: 355 bits (912), Expect = 6.790e-112
Identity = 247/626 (39.46%), Postives = 333/626 (53.19%), Query Frame = 0

Query:    6 RTKPELRAALDACDGRKLKAIISELPSCLPQSKDPLVIANCLEHVRVAADVIIEACDYNTAFESAVSTRSALLSAKYVPWTVAVLNNFAFEERVVSRVALTLSHLAGDAESRGLVGASGAVDQLAIAWKSHPSCIPIIQALISLTAGHIDNISRLMRRRGITTAVNILKGPETARNTPLVEQTLILIGLCTICTPDNYREGISLGPAIIDAINSANALDRVHVAKHAFRAIANIAECWTKENAGYDLGDLHLLVERIITWWLSCPNSRDMAFAASWALAALCRHNKGVLEDIRRSGH-VAPALEKWRLNLRTVDSLANLLQ------------NKNPDPPICTK----SRSSSKRAKAMRNIDDVRGSNSDTAKSESE------------VESDRSDL-----EGRINDPE---RSP--------------------VSVDLASVESNTIIIDSDSDDDHSPPLENTAEFVLHLEPTRIQSSSREFPATLDADSDDQTRALIRKRPRTRSKKENHTSVDCQTIKRKRA--ASTGKEKVHHEDIAEN--------HEDEMIGEESVRRSKRRRKPNSKYVSSPRQ--------RPHPLSKTKQGA---PPLVSFPFIVPQNGNCEVV 553
            +T   LR AL  CD R LK+IIS LPS L  S DP  IA CLEHVRV ADV+ +ACD+NTAFE+A+  RS L+ AK +PW V+VL +FAF+ER+ SRVAL L+H+   AE+RG +G +GAVDQ+AI WK+HP+ IPI+QALISL  GHIDNISRLMRRRGI+TA+ +L+  ++A N  L EQ +IL+GLCTIC PDN +EG SL PAI+ A+NS+     V VA+HA  AIAN+A+CW KE AGY+LGD+  LV+ +IT W S    +DMA AA+WAL+AL  H+  V   ++R G   +  +  W+ + RT   L  +              N   +  I T+    +R+  +R+    + D   G      +S S             V +D++ +     E R  + E   +SP                            E    I DSDSD D    L N AE      P ++   +     T+  DSD  T      R    S   N      Q  +RKR    S G E       +E         ++  + G   VRRS R +KPNSKY+ SP++        R  P +++       PPLVS P +VPQ+   E++
Sbjct:    7 QTAIALRRALQNCDSRGLKSIISNLPSALLLSDDPGQIAQCLEHVRVVADVLADACDFNTAFEAAIYARSLLIQAKMLPWAVSVLESFAFDERIASRVALALAHVGIGAEARGEIGKAGAVDQIAIVWKAHPTSIPIVQALISLCTGHIDNISRLMRRRGISTAIKVLRSSQSATNVQLAEQVMILVGLCTICIPDNVKEGSSLVPAILHALNSSGKRKPVAVARHALIAIANMADCWVKERAGYELGDIERLVQLVITSWKSARTCKDMALAATWALSALYSHDTDVQIHVKRRGQEFSDVVSGWKTHSRTAALLTIIFDATKGLGKQSDQFNSEDEKMIITRPQRLNRTRRRRSSVGYDADGSCGDQDAPERSLSRSTKPRKLTVRPNVIADKTPIRFATREERNEEREILNKSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXEQTPEIYDSDSDLDS---LHNQAE------PHQVMEETSSEVQTIVVDSDSDTVPSCPPRSPECSVPLNDMEAVGQKPRRKRRRITSNGDESAASPQPSEEVVFVKSATNDHLVYGGTDVRRSTRMKKPNSKYIRSPKREGTRRLRGRRPPTTRSSNPPSILPPLVSLPSVVPQHQLFEMI 623

The following BLAST results are available for this feature:

BLAST of Gvermi12768.t1 vs. uniprot

BLAST of Gvermi12768.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJ83_9FLOR	6.790e-112	39.46	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 16..362 e-value: 3.0E-12 score: 47.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 460..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..541
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..382
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 73..310

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_425	contig	ScGOVlb_425:1458285..1459961 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12768.t1	Gvermi12768.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_425 1458285..1459961 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12768.t1 ID=Gvermi12768.t1|Name=Gvermi12768.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=559bp
MFASGRTKPELRAALDACDGRKLKAIISELPSCLPQSKDPLVIANCLEHV
RVAADVIIEACDYNTAFESAVSTRSALLSAKYVPWTVAVLNNFAFEERVV
SRVALTLSHLAGDAESRGLVGASGAVDQLAIAWKSHPSCIPIIQALISLT
AGHIDNISRLMRRRGITTAVNILKGPETARNTPLVEQTLILIGLCTICTP
DNYREGISLGPAIIDAINSANALDRVHVAKHAFRAIANIAECWTKENAGY
DLGDLHLLVERIITWWLSCPNSRDMAFAASWALAALCRHNKGVLEDIRRS
GHVAPALEKWRLNLRTVDSLANLLQNKNPDPPICTKSRSSSKRAKAMRNI
DDVRGSNSDTAKSESEVESDRSDLEGRINDPERSPVSVDLASVESNTIII
DSDSDDDHSPPLENTAEFVLHLEPTRIQSSSREFPATLDADSDDQTRALI
RKRPRTRSKKENHTSVDCQTIKRKRAASTGKEKVHHEDIAENHEDEMIGE
ESVRRSKRRRKPNSKYVSSPRQRPHPLSKTKQGAPPLVSFPFIVPQNGNC
EVVGRHQR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold