Gvermi12654.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12654.t1
Unique NameGvermi12654.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length227
Homology
BLAST of Gvermi12654.t1 vs. uniprot
Match: A0A2V3IFC9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC9_9FLOR)

HSP 1 Score: 248 bits (632), Expect = 8.590e-78
Identity = 115/214 (53.74%), Postives = 144/214 (67.29%), Query Frame = 0
Query:    2 MNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTGGN-VETNEPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYYQKPKPFKYASQSRPITPENFGVSYDKSVKSNAPKETSVDIDLTEPGNSSANVSYITPSPV 214
            M K   + N FHYS WGA P++A+ DE  K R+GFT + SD +QH   K YY VDVTIP C+PDG+YVM W+W+GGTGG  +E NEPQEP PWGYFGDYW+CSFVR+EGG PL+ S  PVF ND+SQ+S++GC+SAN+ P  CA EPC+ DG YQKP+PF       P+TP+NFG   + S+ S      S     T P     + S  TP P+
Sbjct:    1 MEKAVHQHNAFHYSCWGANPVQASSDELEKDRYGFTFVGSDGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWGYFGDYWACSFVRVEGGDPLSASYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNFGGIKENSLTSPVDASPSNIPARTTPKTMYPSASPSTPVPI 214          
BLAST of Gvermi12654.t1 vs. uniprot
Match: R7QEV6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 213 bits (542), Expect = 3.700e-64
Identity = 103/213 (48.36%), Postives = 135/213 (63.38%), Query Frame = 0
Query:    1 MMNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYYQKPKPFKYASQSRPITPENFGVSYDKSVKSNAPKETSVDIDLTEPGNSSANVSYITPSP 213
            MM+K    +N F+Y+ WGA P  A  +E    +FGF+ + SD +QHS  K YYV+DV IP  VPDG YV+ W+WYGG GG+ E N  QEP P+GYFGDYWSCS+V I GG+ L     PVF ND+S +S  GC+SAND P VC+YEPC+ D  YQ P+PFK  +    +TPE FG        +  P ET   +D +    +S N++ +TP+P
Sbjct:   52 MMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGSAEGNVQQEPTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGVCSYEPCRVDSEYQAPRPFKDGNVPEDLTPEQFGGVSPAGRDATPPAETVTPMDAS----ASENMT-LTPTP 259          
BLAST of Gvermi12654.t1 vs. uniprot
Match: A0A2V3IUR8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 197 bits (500), Expect = 1.150e-59
Identity = 87/174 (50.00%), Postives = 117/174 (67.24%), Query Frame = 0
Query:    2 MNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTG-GNVETNEPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYYQKPKPFKYASQSRPITPENF 174
            M+K    RN FHYS WGA   +A  +E +  RFGF  + +D + HS  + YY    T+P CVPDG Y++ W+W+GGT  G ++ N P+ P   G+F DYW+CS+VRI+GG  L  SCDPVFVND+ QFS DGC++ ND P VC+YEPC  +G+Y+KP+PFK  S+   +TP  F
Sbjct:   75 MSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDNRPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGVCSYEPCISEGFYRKPQPFKDGSKPPSLTPSLF 248          
BLAST of Gvermi12654.t1 vs. uniprot
Match: A0A2V3J1Z2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z2_9FLOR)

HSP 1 Score: 183 bits (465), Expect = 5.470e-53
Identity = 86/184 (46.74%), Postives = 118/184 (64.13%), Query Frame = 0
Query:    1 MMNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTGG-NVETNEPQ--EPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYYQKPKPFKYASQSRPITPENFGVSYDKS 181
            MM+K   +RN FHYS WGA P +A  DE     FG++ + +D ++H   + YYV +V+IP+ +PDGDYV+ W+W+GG G   V  N PQ  +P P GY+ D WSC++VRIEGG  L  +  P F ND+SQ++ +GC++AND P +C  EPC   G +QKP+ FK  S   P+TP NF  S   S
Sbjct:   89 MMDKAVHERNAFHYSCWGANPQQAGPDELQTDHFGYSYVGNDGEEHPYGQGYYVANVSIPKVIPDGDYVLGWVWFGGIGSVPVLGNYPQPPQPSPMGYYADQWSCAYVRIEGGLALESTYYPAFKNDISQYNPEGCLAANDSPGICTVEPCYTPGIFQKPRNFKAGSYPSPLTP-NFYASVSPS 271          
BLAST of Gvermi12654.t1 vs. uniprot
Match: A0A2V3IS62_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 179 bits (453), Expect = 4.110e-51
Identity = 83/176 (47.16%), Postives = 111/176 (63.07%), Query Frame = 0
Query:    1 MMNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTGGNVETN-EPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYYQKPKPFKYASQSRPITPENFG 175
            +M++    RN FHYS WGA P++A  +E  K  FGFTM  SD  QH   K YYV  +TIP  +PDGDYV+ W WYGGTGGN+++   PQ P  + YFGDY+SCSFV++ GG     +  P F+ND++QFS  GC+S+ D    CA EPC    ++++P+ F       P+TP  FG
Sbjct:  111 IMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGGE-YTQTYKPKFINDMAQFSNAGCMSSTDNLGNCAREPCHKPAFFRRPRQFADGRHPPPLTPALFG 285          
BLAST of Gvermi12654.t1 vs. uniprot
Match: A0A2V3IBQ8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBQ8_9FLOR)

HSP 1 Score: 153 bits (386), Expect = 2.990e-41
Identity = 87/215 (40.47%), Postives = 112/215 (52.09%), Query Frame = 0
Query:    2 MNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTGGN-VETNEPQEPVPWGYFGDYWSC-SFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYYQKPKPFKYASQSRPITPENFGVSYDKSVKSNAPKETSVDIDLTEPGNSSANVSYITPSPV 214
            M K   + N FH    G +         +K     ++     +QH   K YY VDVTIP C+PDG+YVM W+W+GGTGG  +E NEPQEP PW          SF    G T       PVF ND+SQ+S++GC+SAN+ P  CA EPC+ DG YQKP+PF       P+TP+NFG   + S+ S      S     T P     + S  TP P+
Sbjct:    1 MEKAVHQHNAFHLQLLGRQFQFKRHPMSSKRIDTVSLCWQHGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWVILATIGHVRSFASKVGSTFRL--YQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNFGGIKENSLTSPVDASPSNIPARTTPKTMYPSASPSTPVPI 213          
BLAST of Gvermi12654.t1 vs. uniprot
Match: R7QJR3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR3_CHOCR)

HSP 1 Score: 95.5 bits (236), Expect = 1.910e-19
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   49 DKE--YYVVDVTIPECVPDGDYVMSWIWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKG 150
            DKE   Y   +T+P   PDG YV+ W WYGG  G+ + +         +FGDY+SCSFVRIEGG  L+ S  PVF   ++   +DGC+S+ D   VC  EPC+G
Sbjct:  137 DKEGMAYRAPITVPTAYPDGIYVLGWAWYGG--GDFKHDS--------FFGDYYSCSFVRIEGGARLSSSSKPVFAPGLNTKHRDGCLSSTDRVGVCKREPCRG 230          
BLAST of Gvermi12654.t1 vs. uniprot
Match: A0A2V3IGZ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGZ3_9FLOR)

HSP 1 Score: 94.4 bits (233), Expect = 5.500e-19
Identity = 54/148 (36.49%), Postives = 74/148 (50.00%), Query Frame = 0
Query:   53 YVVDVTIPECVPDGDYVMSWIWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYY-QKPKPFKYASQSRPITPENFGVSYDKSVKSNAPKETSVDIDLTEP 199
            Y V +T+P   PDG YV  W WYGG  G+            G+FGDY+SCSF+RIEGG+ L  S  P F+    Q SQ  CIS+ D   VC  EPC+G     ++P+        R I+ E+F  +  +       K+ + +   T P
Sbjct:  140 YEVPMTVPSVYPDGVYVFGWAWYGG--GDFRGR--------GFFGDYYSCSFIRIEGGSRLTTSYSPRFIAGTRQSSQSTCISSVDRIGVCIREPCRGPQIAPRRPRGLPRTIYLRDISRESFASNNFRQNSRGGRKKLNKESQFTPP 277          
BLAST of Gvermi12654.t1 vs. uniprot
Match: A0A1X6P3E1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3E1_PORUM)

HSP 1 Score: 92.8 bits (229), Expect = 3.670e-18
Identity = 58/176 (32.95%), Postives = 79/176 (44.89%), Query Frame = 0
Query:    1 MMNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKGDGYYQK--PKPFKYASQSRPITPENF 174
            M +    +RN FH+S W     K    +HN+  +  T   + + Q           + IP  +PDGDYV+ W WYGG  G V             FGDY+ CS+VR+EGG PLA    P F  D +      C+S  + P +C  EPC    Y ++  P  F+      PI   NF
Sbjct:  117 MWDMGSHERNAFHWSCWNINRFKCGAMDHNRDCYFDTSNMAFKDQ-----------LRIPNNLPDGDYVLGWTWYGGGEGPVGKQA--------IFGDYYDCSYVRVEGGNPLADKHIPTFSGDATGT----CLSTVNRPGICKREPCAPMPYVRRRVPVEFEGGRHPPPIYASNF 269          
BLAST of Gvermi12654.t1 vs. uniprot
Match: R7QFV8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFV8_CHOCR)

HSP 1 Score: 86.7 bits (213), Expect = 1.740e-16
Identity = 68/201 (33.83%), Postives = 91/201 (45.27%), Query Frame = 0
Query:   29 HNKARFGFTMIES-------DEKQH-SIDKEYYVVDVTIPECVPDGDYVMSWIWYGGTGGNVETNEPQEPVPWGYFGDYWSCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKG-DGYYQKPKPFKYASQSRPITPENFGVSYDKSVKSNAPKETSVDIDLTEP-----GNSSANVSYI-TPSPV 214
            H++  F ++  ES       +EKQ    D   Y   V IP+C PDGDYV+SW W+GG                  FGDY+SCSFV+I+GG      C+P F    +    D C S+     +C  EPC G  G   KP  F     S PI      + Y  S+K     E+     L+E      G+ S NV+ I +PSP+
Sbjct:    6 HSELAFRYSCFESGSHTCDIEEKQGCGTDTLLYQAKVEIPKCYPDGDYVLSWAWFGGLSMGSSL-----------FGDYYSCSFVQIQGGEKK-DKCEPRFQPGENTRKPDSCYSSVGAVGICEKEPCLGRKGKAIKPSAFLKPQTSLPIQK---WIDYANSLKDQERGESKGVAALSEKSGPHKGSMSRNVTLIPSPSPL 191          
The following BLAST results are available for this feature:
BLAST of Gvermi12654.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2V3IFC9_9FLOR8.590e-7853.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEV6_CHOCR3.700e-6448.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IUR8_9FLOR1.150e-5950.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Z2_9FLOR5.470e-5346.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS62_9FLOR4.110e-5147.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBQ8_9FLOR2.990e-4140.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJR3_CHOCR1.910e-1945.19Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IGZ3_9FLOR5.500e-1936.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P3E1_PORUM3.670e-1832.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QFV8_CHOCR1.740e-1633.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:96452..97132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12654.t1Gvermi12654.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 96452..97132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12654.t1 ID=Gvermi12654.t1|Name=Gvermi12654.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=227bp
MMNKEDQKRNVFHYSFWGAKPMKATEDEHNKARFGFTMIESDEKQHSIDK
EYYVVDVTIPECVPDGDYVMSWIWYGGTGGNVETNEPQEPVPWGYFGDYW
SCSFVRIEGGTPLAPSCDPVFVNDVSQFSQDGCISANDEPCVCAYEPCKG
DGYYQKPKPFKYASQSRPITPENFGVSYDKSVKSNAPKETSVDIDLTEPG
NSSANVSYITPSPVSAEYEKLLSPSL*
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