Gvermi12938.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12938.t1
Unique NameGvermi12938.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length157
Homology
BLAST of Gvermi12938.t1 vs. uniprot
Match: A0A2V3IHE2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHE2_9FLOR)

HSP 1 Score: 201 bits (512), Expect = 7.840e-64
Identity = 94/151 (62.25%), Postives = 120/151 (79.47%), Query Frame = 0
Query:    8 AFLFMCAFLAVTNAS--KPGRK-YCTDETPLPVLVTEEHLDALNECDLKRLIRLRTDDFKFYLPRGELVEGVEGATELFGSFCKPYPEGLRGIKFTIKDSFLVSSTWNVRWVASAPFMQDYHGADAYVTRGFKMAAQVTTFDSEELNFTAS 155
            A L    + ++ +A+  +P R  YC+ E PLP+ VTEEH++ALN+C++KRL++LRTDDF FY PRG++ +G  GA   F + CKP+PEG RG+K TIK++FLV +T+NVRWV SAPF +DYHGADAYVTRGFKMAAQVTTFDSEELNFT S
Sbjct:   10 ATLLCVTYFSIASATYYRPSRPTYCSYEKPLPIQVTEEHIEALNDCNVKRLVQLRTDDFIFYFPRGDVSKGRAGALTTFTNLCKPFPEGFRGLKLTIKEAFLVGNTYNVRWVISAPFFEDYHGADAYVTRGFKMAAQVTTFDSEELNFTRS 160          
BLAST of Gvermi12938.t1 vs. uniprot
Match: A0A2V3IHI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHI7_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 1.820e-51
Identity = 77/125 (61.60%), Postives = 100/125 (80.00%), Query Frame = 0
Query:   29 CTDETPLPVLVTEEHLDALNECDLKRLIRLRTDDFKFYLPRGELVEGVEGATELFGSFCKPYPEGLRGIKFTIKDSFLVSSTWNVRWVASAPFMQDYHGADAYVTRGFKMAAQVTTFDSEELNFT 153
            C +E PL + VTEEH++ALN+C++ RL++LRT+DFK YLPRGE+V+G E A   F ++CKPYP+G+RG +  I+D+FLV +T+NVRWV  +PF +DY GADAYVTRGFKMAA VTT D   LNFT
Sbjct:  118 CGEEKPLAMQVTEEHIEALNDCNINRLVQLRTEDFKMYLPRGEVVDGKENAAIAFTNWCKPYPKGIRGFELVIQDAFLVGNTYNVRWVLRSPFFEDYPGADAYVTRGFKMAAIVTTLDVNALNFT 242          
BLAST of Gvermi12938.t1 vs. uniprot
Match: A0A1F8S248_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_16_70_13 TaxID=1797662 RepID=A0A1F8S248_9CHLR)

HSP 1 Score: 114 bits (284), Expect = 1.040e-26
Identity = 64/140 (45.71%), Postives = 77/140 (55.00%), Query Frame = 0
Query:   12 MCAFLAVTNASKPGRKYCTDETPLPVLVTEEHLDALNECDLKRLIRLRTDDFKFYLPRGELVEGVEGATELFGSFCKPYPEGLRGIKFTIKDSFLVSSTWNVRWVASAPFMQD-YHGADAYVTRGFKMAAQVTTFDSEEL 150
            M   LA+  A+    K      P P  V  EHLDALN CD+ RL+    D+ K  LP G  VEG +    LF  FC+P+P GL G++FT   S  V  T N +W A A F+ + Y GADAY T    MAAQVTTFD  EL
Sbjct:    1 MAMVLAIATAAGAVAKTEQVRQPTPAAVVAEHLDALNACDVDRLMAQYPDEIKILLPGGVTVEGRDDVRALFEGFCQPFPAGLAGLQFTELSSSKVQKTVNAQWKAEACFLAEPYLGADAYETWSGLMAAQVTTFDGAEL 140          
BLAST of Gvermi12938.t1 vs. uniprot
Match: A0A535PX01_9CHLR (Nuclear transport factor 2 family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535PX01_9CHLR)

HSP 1 Score: 105 bits (263), Expect = 3.480e-26
Identity = 63/151 (41.72%), Postives = 82/151 (54.30%), Query Frame = 0
Query:    6 VIAFLFMCAFLAVTNASKPGRKYCTDETPLPVLVTEEHLDALNECDLKRLIRLRTDDFKFYLPRGELVEGVEGATE---LFGSFCKPYPEGLRGIKFTIKDSFLVSSTWNVRWVASAPFMQD-YHGADAYVTRGFKMAAQVTTFDSEELNF 152
            +  F+   A +A+ N      K      P P  V  EHLDALN C++ RL+    +    +LP G     V G T    LF  FCKPYP GL G++FT +    V  T NV+WVA+A F+ + Y+GADAYVT+   M AQVTTF +  L F
Sbjct:    5 IAVFVGSGAAIALANEGNSDLK----RQPSPEAVVAEHLDALNHCNVDRLMAQYPESVHLFLPGGSAPNTVIGRTAVRALFEGFCKPYPAGLNGLQFTSQVVQKVGDTINVQWVANADFLAEPYYGADAYVTKHGLMYAQVTTFGAPPLKF 151          
BLAST of Gvermi12938.t1 vs. uniprot
Match: A0A1Z4GUN8_9CYAN (Uncharacterized protein n=1 Tax=Calothrix sp. NIES-2100 TaxID=1954172 RepID=A0A1Z4GUN8_9CYAN)

HSP 1 Score: 97.1 bits (240), Expect = 1.900e-22
Identity = 55/121 (45.45%), Postives = 73/121 (60.33%), Query Frame = 0
Query:   34 PLPVLVTEEHLDALNECDLKRLIRLRTDDFKFYLPRGELVEGVEGATELFGSFCKPYPEG-LRGIKFTIKDSFLVSSTWNVRWVASAPFMQD-YHGADAYVTRGFKMAAQVTTFDSEELNF 152
            P P+ V EEHL ALN C L+RL+    +  + +LP G +V+G      LF +F KP  +G L G+ FT +    V  T NV+W A APF+ + Y G+DAYVTR   M AQVTTF+  +L F
Sbjct:   56 PTPIKVVEEHLKALNGCQLERLMAQYPNKAEIHLPDGAVVKGRTELRTLFTNFVKPREQGGLCGLTFTPEYVSQVDQTINVQWRAEAPFLAEPYRGSDAYVTRNGLMYAQVTTFNGSDLKF 176          
BLAST of Gvermi12938.t1 vs. uniprot
Match: UPI0016882CF7 (hypothetical protein n=1 Tax=Nostoc sp. FACHB-110 TaxID=2692834 RepID=UPI0016882CF7)

HSP 1 Score: 96.3 bits (238), Expect = 3.780e-22
Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 0
Query:   34 PLPVLVTEEHLDALNECDLKRLIRLRTDDFKFYLPRGELVEGVEGATELFGSFCKPYPEG-LRGIKFTIKDSFLVSSTWNVRWVASAPFMQD-YHGADAYVTRGFKMAAQVTTFDSEELNF 152
            P P+ V EEH+ ALN C L+RL+    +  + +LP G +V+G      LF  F KPY +G L G+ FT +    +  T NV+W A APF+++ Y G+DAY T    M AQVTTF   EL F
Sbjct:   56 PTPIKVVEEHIKALNSCQLERLMAQYPNKAEIHLPDGVVVKGRTQIRNLFTDFVKPYEQGGLCGLTFTAEYVSQIDQTINVQWRAEAPFLKEPYRGSDAYETSQGLMYAQVTTFKGSELKF 176          
BLAST of Gvermi12938.t1 vs. uniprot
Match: A0A1X6PKS2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKS2_PORUM)

HSP 1 Score: 59.7 bits (143), Expect = 2.720e-8
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0
Query:   39 VTEEHLDALNECDLKRLIRLRTDDFKFYLPRGELVEGVEGATELFGSFCKPYPEGLRG--IKFTIKDSFLVSSTWNVRWVASAPFM-QDYHGADAYVTRGFKMAAQVTTFDSEELNF 152
            V +EHLDALN CD+ RL+     +FKF    G +++   G  EL+   C P  +G      +F ++ SF       V+   +AP + + Y  +DA+ TR  K+   ++TFD   L F
Sbjct:   37 VVKEHLDALNACDVPRLMAQHPPNFKFLGVNGTMLDRA-GMRELYVGVCGPAVKGGPDGPYRFEVRSSFRFGPVLYVKLKVTAPHLARPYFLSDAFGTRCDKLVMVLSTFDGTNLVF 152          
The following BLAST results are available for this feature:
BLAST of Gvermi12938.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IHE2_9FLOR7.840e-6462.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IHI7_9FLOR1.820e-5161.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1F8S248_9CHLR1.040e-2645.71Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A535PX01_9CHLR3.480e-2641.72Nuclear transport factor 2 family protein n=1 Tax=... [more]
A0A1Z4GUN8_9CYAN1.900e-2245.45Uncharacterized protein n=1 Tax=Calothrix sp. NIES... [more]
UPI0016882CF73.780e-2243.80hypothetical protein n=1 Tax=Nostoc sp. FACHB-110 ... [more]
A0A1X6PKS2_PORUM2.720e-833.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 35..154
e-value: 7.7E-7
score: 31.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 41..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2237573..2238043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12938.t1Gvermi12938.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2237573..2238043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12938.t1 ID=Gvermi12938.t1|Name=Gvermi12938.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=157bp
MHSHHVIAFLFMCAFLAVTNASKPGRKYCTDETPLPVLVTEEHLDALNEC
DLKRLIRLRTDDFKFYLPRGELVEGVEGATELFGSFCKPYPEGLRGIKFT
IKDSFLVSSTWNVRWVASAPFMQDYHGADAYVTRGFKMAAQVTTFDSEEL
NFTASG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf