Gvermi12896.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12896.t1 vs. uniprot
Match: A0A2V3J1S2_9FLOR (Ribonuclease H2 subunit B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1S2_9FLOR) HSP 1 Score: 245 bits (625), Expect = 1.330e-76 Identity = 122/256 (47.66%), Postives = 168/256 (65.62%), Query Frame = 0
Query: 1 MAPAHPKSGLVVIPKDLTASSLPETNPSLISFEAIELPVKNTDKIVPLYIAHDHNESSVVVEFVKFTHTHGSWITVPQDFALAPHFCSDGNLTFITKVDPLFAILIVMDCNSESAQPGVFQPLDVLCTTEEGRNLSNLSSKPQIALLCDSKVAGGESFYRLSKEKTVSWILRKHQLLSQHPRLNDQCAADILCQYLTQRWATLFKSALDIRKPIAQSIPGA-DSPADLAMSIMMDGAKDNSIATSLPQYDKKRKAS 255
MA + +S +V +PK L + + + E I+L +++PL+ A D S +VVE VKF H +GSW+ VP+D A P+ S+GN+TF+T+VDPLFA+L++ DCN + VFQPLD LC G NLS + Q++ LCD+KV ++FYRLS EKT+SW+L+KH +LS+H RLN+Q AADI+CQYL RW T+F+ AL P P +S A+LAMSIMMD AK N++A SLPQ + KRKA+
Sbjct: 1 MAASRSRSAIVALPKLLLQGDKGKNTLTKVFIEPIKLLGNEEHRLIPLHFARDSRNSLMVVELVKFAHPYGSWMIVPEDLAQPPYLSSNGNITFVTRVDPLFAVLVIADCNGTVGKTRVFQPLDSLCIANNGINLSAVCPAQQVSHLCDTKVVSDQTFYRLSDEKTLSWLLKKHSILSKHSRLNNQHAADIICQYLNHRWNTIFRRALKTSGPDGSPSPQKKESAAELAMSIMMDNAKANNLAESLPQNNMKRKAT 256
BLAST of Gvermi12896.t1 vs. uniprot
Match: R7QL60_CHOCR (RNase_H2-Ydr279 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL60_CHOCR) HSP 1 Score: 157 bits (398), Expect = 5.110e-42 Identity = 82/221 (37.10%), Postives = 122/221 (55.20%), Query Frame = 0
Query: 35 IELPVK-NTDKIVPLYIAHDHNESSVVVEFVKFTHTHGSWITVPQDFALAPHFCSDGNLTFITKVDPLFAILIVMDCNSESAQPGVFQPLDVLCTTEEGRNLSNLSSKPQIALLCDSKVAGGESFYRLSKEKTVSWILRKHQLLSQHPRLNDQCAADILCQYLTQRWATLFKSAL--DIRKPIAQSIPGADSPADLAMSIMMDGAKDNSIATSLPQYDKKR 252
IE P +VPLYI ++ V+VE V+F SW VP+ L P CS+G++T +T+VDPLF L++MD E VFQPLD LC T +G NL+ L Q +LCD K AGGESFY+L+ EK +SW+ KH L + ++ A I+ QY+T W + L ++ +++ A + LA++ MM+ A + + A + D+K+
Sbjct: 92 IEFPENAKASSVVPLYILRKEEKTVVLVELVRFKSPFASWFFVPEAEELVPDVCSNGDVTMVTRVDPLFCALVLMDSLREVGDKQVFQPLDALCVTADGTNLTGLCDTRQFEMLCDVKEAGGESFYKLNDEKAMSWLQAKHGALVRESKMKSADAVGIISQYVTAHWGKQLRKQLLAEVENVDSEAHKAAKNSHSLALATMMEDAVETNQAILAEERDRKK 312 The following BLAST results are available for this feature:
BLAST of Gvermi12896.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12896.t1 ID=Gvermi12896.t1|Name=Gvermi12896.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=304bpback to top |