Gvermi12825.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12825.t1
Unique NameGvermi12825.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length286
Homology
BLAST of Gvermi12825.t1 vs. uniprot
Match: A0A2V3J1P0_9FLOR (DnaJ-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1P0_9FLOR)

HSP 1 Score: 379 bits (974), Expect = 4.050e-130
Identity = 206/287 (71.78%), Postives = 239/287 (83.28%), Query Frame = 0
Query:    1 MSFLRATLLGRIAPALHALSTRSFTERAAGPGGLFRSS-TVVNPSKEQASASRKRLRRARTALDHTRLPPELQNEHDHHENQFESEEDIRDFVEARIQESMRTGQFDNLKNKGRPLPHQPSSTHEYAMRIMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHTHMPHAPHRWALAVKIMELRIESVNKRVDTFNLVRPMSVSHLFRLRLRINEEIERAMKSKLPT----ESE-QYRMSGQPTASKEKQRADKSEPRYSWQLFARFVRATEVREYKRPTWGRRKSDD 281
            MS  R  L  R  PAL+ L +RSFT+RAAGPGGLF+S   VVNPSK+Q +ASRKRLRRAR+ +D   LPPEL+NE D     FESE DIRDFVEARI ESMRTG+FDNLKNKGRPLP+QPSSTHEYAMRIMRDNGLRP+WLQLMHDID+EKRQ+R  LSHAWH+HMPHAPHRWALA+++ ELR++SVNK+VDTFNLVRPMSVSHLFRLRLRI +E+ERAMKS  PT    ESE Q +++   T++KE+      EPR SWQLFARFVRAT+VREY+RPTWGRRKS++
Sbjct:    1 MSSFRFALPLRSLPALNVLCSRSFTKRAAGPGGLFQSKDAVVNPSKQQENASRKRLRRARSVVDEMHLPPELRNEED---CLFESEGDIRDFVEARILESMRTGKFDNLKNKGRPLPNQPSSTHEYAMRIMRDNGLRPYWLQLMHDIDTEKRQIRAGLSHAWHSHMPHAPHRWALAMRVAELRMQSVNKQVDTFNLVRPMSVSHLFRLRLRIKDEVERAMKSDPPTPTKRESEVQQKVAKDTTSTKEE------EPRPSWQLFARFVRATDVREYERPTWGRRKSEE 278          
BLAST of Gvermi12825.t1 vs. uniprot
Match: R7QIT0_CHOCR (DUF1992 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIT0_CHOCR)

HSP 1 Score: 213 bits (541), Expect = 3.240e-65
Identity = 120/214 (56.07%), Postives = 139/214 (64.95%), Query Frame = 0
Query:   95 RIQESMRTGQFDNLKNKGRPLPHQP-SSTHEYAMRIMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHTHMPHAPHRWALAVKIMELRIESVNKRVDTFNLVRPMSVSHLFRLRLRINEEIERAMKSKLPTESEQYRMSGQPTAS--------------------------KEKQRADKS---EPRYSWQLFARFVRATEVREYKRPTWGRRK 278
            RIQESMRTGQFDNLKNKGRPLP  P +S  + A+RIMR NG+RPHWLQLMHDID EKR  R  L  AWH++MPH+P RW LAV++ ELR+  VNK VDTFNL+RP  V HLFRLRLR+ EE+ RA +S++P    Q R                                  KE+ + D S   EPR SWQLFARFVRA EVREY  PTWGRR+
Sbjct:    2 RIQESMRTGQFDNLKNKGRPLPGPPPASMLDVALRIMRQNGVRPHWLQLMHDIDHEKRLFRTHLQFAWHSYMPHSPARWELAVRVAELRVVEVNKAVDTFNLIRPSCVGHLFRLRLRMPEEVTRAQESEVPEVLAQKRXXXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXKEQSQEDGSVVQEPRPSWQLFARFVRAAEVREYDLPTWGRRR 215          
BLAST of Gvermi12825.t1 vs. uniprot
Match: M2Y7V9_GALSU (Nucleobase:cation symporter-1, NCS1 family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7V9_GALSU)

HSP 1 Score: 118 bits (295), Expect = 4.720e-28
Identity = 76/224 (33.93%), Postives = 125/224 (55.80%), Query Frame = 0
Query:   22 RSFTERAAGPGGLFRSSTVVNPSKEQASASRKRLRRARTALDHTRLPPELQNEHDHHENQFESEEDIRDFVEARIQESMRTGQFDNLKNKGRPLPHQPSS----THEYAMRIMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHTHM------------PHAPHRWALAVK-IMELRIESVNKRVDTFNLVRPMSVSHLFRLRLRINEEIERAMKSKLPTESE 228
            R F  RA G GG+++ S  VNPS+ +     +R+RRA   L  ++LP EL+ +         S++++R FVE RI+E +  G F+NLK KG+P  +  S+    T + AM+++++N L+P W++LM +ID EK+ +R  L   W  ++            P     W    +  ++ +I  +N+++D FNL +P  +  +FRLRLR  EE++RA +     ESE
Sbjct:    5 RYFAVRAGGVGGVWKVSNAVNPSRLERLEKNERMRRAGWELYDSKLPKELRAQ-----LLPNSDKEVRSFVEMRIREMILNGDFENLKGKGKPFNYSDSAVRDGTFDLAMKMLKNNDLKPPWIELMQEIDKEKKAIRQFLRLQWLNYLVVSGNCLDQDVSPIDAGIWCKQEEEYLKQQIAQLNRKIDDFNLQKPERMDFIFRLRLRWIEEVKRAQQPLSQQESE 223          
BLAST of Gvermi12825.t1 vs. uniprot
Match: M1VDY7_CYAM1 (DUF1992 domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VDY7_CYAM1)

HSP 1 Score: 102 bits (253), Expect = 6.650e-22
Identity = 80/253 (31.62%), Postives = 129/253 (50.99%), Query Frame = 0
Query:   17 HALSTRSFT---ERAAGPGGLFRSSTVVNPSKEQASASRKRLRRARTALDHTRLPPELQNEH-------------DHHENQFESEEDIRDFVEARIQESMRTGQFDNLKNKGRPLPHQPSSTH--EYAMR-IMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHTHMPHAP-----------HRWALAVKIMELRIESVNKRVDTFNLVRPMSVSHLFRLRLRINEEIERAMKSKLPTESEQYRMSGQPTAS 239
            HA+ +R+     ER AGPGG+ + +  V PS+        RLRRA   L + R+ P L+ +              +   ++FE E  IRD+VE++IQE++R G F+ L      LP  P       Y M  +++ +GLRP W++ MH++D+E +++R  L  A+   +  A             RW  A + ++ ++  VN+R+D FNL++P  +  +FRLR+R   E    M+ K   ESE    S +P +S
Sbjct:   22 HAVPSRALVAVAERPAGPGGVQKRTERVVPSEAARQERTARLRRAVDLLQN-RIYPFLEQKVAGEAERKDLLAVLEQDSSRFEDERAIRDWVESQIQEAIRQGAFERLPRGPLQLPQPPLGVDLVTYTMHGLLQRHGLRPVWIECMHEVDAEVKRIRLALERAYRARVATAEDTSPASTAQRAERWEAAARELQEQMHQVNRRIDAFNLMKPERLDTVFRLRMRWEHEF---MRVKQRVESE---YSAEPRSS 267          
BLAST of Gvermi12825.t1 vs. uniprot
Match: A0A7S0BI67_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BI67_9RHOD)

HSP 1 Score: 75.9 bits (185), Expect = 2.390e-13
Identity = 45/127 (35.43%), Postives = 65/127 (51.18%), Query Frame = 0
Query:   22 RSFTERAAGPGGLFRSSTVVNPSKEQASASRKRLRRARTALDHTRLPPELQNEHDHHENQFESEEDIRDFVEARIQESMRTGQFDNLKNKGRPLPHQPSS------THEYAMRIMRDNGLRPHWLQL 142
            R F +  AG GGL+R     NP     +    R+ +A   ++  R PPE +        + +S E+I D+VE +IQ+++  G F  LKNKG+ L     S      T + AMRIM+DN L+P W  L
Sbjct:   25 RGFADGPAGYGGLYRRQGETNPKARSRAEKLARIEKAEWGVEDQRNPPEFRER-----PRMKSTEEITDYVEGQIQKAIAKGDFRRLKNKGKKLVQSDGSGRLVDETFDIAMRIMKDNNLKPRWYAL 146          
BLAST of Gvermi12825.t1 vs. uniprot
Match: A0A3M1BVW0_9BACT (DUF1992 domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1BVW0_9BACT)

HSP 1 Score: 72.8 bits (177), Expect = 4.360e-12
Identity = 47/162 (29.01%), Postives = 78/162 (48.15%), Query Frame = 0
Query:   62 LDHTRLPPELQNEHDHHENQFESEEDIRDFVEARIQESMRTGQFDNLKNKGRPLPHQPSS---THEYAMRIMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHTHMPHAPH-----------RWALAVKIMELRIESVNKRVDTFNLVRPMSVSHLFRLRL 209
            +D     P   +E    E +F    D ++ +E  I +    G FDNLK KG+PL +Q +      E+A  ++++N + P W+     I +E  +LR+T++ AW  H+    H            W  A  +   +I  +N+R+D +NL RP+    LF+L L
Sbjct:    1 MDRKEKRPYRADEETPEERRFRMRHDWQNLIEDLITDGKEKGLFDNLKGKGKPLNYQKNPYAPEMEFAHTLLKENDMAPAWIMARKQILAEVAELRDTIAAAWAAHVYAFEHVTEDQKGKLIVSWDDACLVWLEQIAKLNRRIDDYNLKRPIERLELFKLTL 162          
BLAST of Gvermi12825.t1 vs. uniprot
Match: A0A7C6ZWY2_9CHLR (DUF1992 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6ZWY2_9CHLR)

HSP 1 Score: 70.1 bits (170), Expect = 6.670e-11
Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = 0
Query:   86 EDIRDFVEARIQESMRTGQFDNLKNKGRPL-----PHQPSSTHEYAMRIMRDNGLRPHWL------------------QLMHDIDSEKRQLRNTLSHAWHTHMPHAPHRWALAVKIMELRIESVNKRVDTFNLVRPMSVSHLFRLRLRINEEIERA 218
            E+ RD +  RI+++MR GQFDNL+NKG+PL     PH P    + A  ++++N L P W+                  Q++ D  +++ Q R+T + A          RW   V   +  I  +N+R++  N  +P++   + +LRL   +EI+RA
Sbjct:   37 EEWRDLISQRIEDAMRAGQFDNLRNKGKPLDPAPEPHVPPDM-QMANSLLKNNELTPAWIADRNAMLAEIERFRAKLRQVVTDFQAQREQARSTAAQAA------LEQRWQTQVATWQEEIRLLNRRIELQNFKQPVTFLEIVKLRLA--DEIKRA 183          
BLAST of Gvermi12825.t1 vs. uniprot
Match: UPI000C7614A5 (dnaJ homolog subfamily C member 28-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7614A5)

HSP 1 Score: 66.6 bits (161), Expect = 3.790e-9
Identity = 48/152 (31.58%), Postives = 79/152 (51.97%), Query Frame = 0
Query:   88 IRDFVEARIQESMRTGQFDNLKNKGRPLPHQPS-------STHEYAMRIMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHT--HMPHAPHR---WALAVKIMEL-RIESVNKRVDTFNLVRPMSVSHLFRLRLRINEEIERAMKSKLPTE 226
            I   VE  IQESM +G+FDNL  KG+PLP++         +TH+   +I+ + G  P W+ L  DI  +   +R  L     T    P +P +   W L    +E+  + +VNK++D FNL+ P+    +F+  ++   E ++ ++   PTE
Sbjct:   87 IERLVEDLIQESMASGEFDNLAGKGKPLPNRVDYNPYADFTTHKMN-QILAEGGFAPEWVMLRKDIRDQFTAIRGELKKKRQTLGPPPLSPKKLQEWELICSRIEMDSVRNVNKQIDKFNLIVPILQGQMFQFYMK--SEAKKILEDYDPTE 235          
BLAST of Gvermi12825.t1 vs. uniprot
Match: A0A7J7IM08_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM08_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 6.250e-9
Identity = 34/114 (29.82%), Postives = 62/114 (54.39%), Query Frame = 0
Query:  129 IMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHTHMP-----------HAPHRWALAVKIMELRIESVNKRVDTFNLVRPMSVSHLFRLRLRINEE---IERAMKSKLPTESE 228
            +++ +GLRP W++ MH++D+E +++R  L  A+    P               RW  A   +  ++  VN+R+D FNL++P  +  +FRLR+R   E   +ER ++ +  +E E
Sbjct:    4 LLQRHGLRPPWIERMHEVDAEVKRIRMALERAYRARCPCSSDDTPEAAVRRAQRWEAAATELRAQMRQVNRRIDEFNLMKPERLDTVFRLRMRWEFELAHVERMVRGEQASEQE 117          
BLAST of Gvermi12825.t1 vs. uniprot
Match: A0A293LZ80_ORNER (Pentatricopeptide repeat-containing protein (Fragment) n=2 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LZ80_ORNER)

HSP 1 Score: 65.5 bits (158), Expect = 1.750e-8
Identity = 46/159 (28.93%), Postives = 79/159 (49.69%), Query Frame = 0
Query:   81 QFESEEDIRDFVEARIQESMRTGQFDNLKNKGRPLPHQPSSTHEYAM-----RIMRDNGLRPHWLQLMHDIDSEKRQLRNTLSHAWHTHMPHAP------HRWALAVKIMELRIESVNKRVDTFNLVRPMSVSHLFRLRLR------INEEIERAMKSK 222
            Q+++ + I   VE  IQES+  G+FDNL   G+PL +   +    +M     +++ +NG  P W+ L  +I  EK+Q+R TL  A        P       RW   ++ +   + S+N+++D +N+V P+S       +L       +N  +E+  KSK
Sbjct:  189 QYKTTQAIERLVEDLIQESIAKGEFDNLPGFGKPLKYAHENPFVDSMTQKLNQVLINNGFVPEWVMLEKEISEEKQQVRKTLL-AERVKFGPLPLDLDERQRWDRVIEQLRKPVSSINRKIDKYNMVVPLSSKQQVHFQLAQVSEKVLNTPVEKKGKSK 346          
The following BLAST results are available for this feature:
BLAST of Gvermi12825.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3J1P0_9FLOR4.050e-13071.78DnaJ-like n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7QIT0_CHOCR3.240e-6556.07DUF1992 domain-containing protein n=1 Tax=Chondrus... [more]
M2Y7V9_GALSU4.720e-2833.93Nucleobase:cation symporter-1, NCS1 family n=1 Tax... [more]
M1VDY7_CYAM16.650e-2231.62DUF1992 domain-containing protein n=1 Tax=Cyanidio... [more]
A0A7S0BI67_9RHOD2.390e-1335.43Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A3M1BVW0_9BACT4.360e-1229.01DUF1992 domain-containing protein (Fragment) n=1 T... [more]
A0A7C6ZWY2_9CHLR6.670e-1130.13DUF1992 domain-containing protein n=1 Tax=Chlorofl... [more]
UPI000C7614A53.790e-931.58dnaJ homolog subfamily C member 28-like n=1 Tax=Eu... [more]
A0A7J7IM08_9RHOD6.250e-929.82Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A293LZ80_ORNER1.750e-828.93Pentatricopeptide repeat-containing protein (Fragm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018961DnaJ homologue, subfamily C, member 28, conserved domainPFAMPF09350DUF1992coord: 92..154
e-value: 4.8E-14
score: 52.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..247
NoneNo IPR availablePANTHERPTHR39158OS08G0560600 PROTEINcoord: 35..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1707676..1708598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12825.t1Gvermi12825.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1707676..1708598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12825.t1 ID=Gvermi12825.t1|Name=Gvermi12825.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=286bp
MSFLRATLLGRIAPALHALSTRSFTERAAGPGGLFRSSTVVNPSKEQASA
SRKRLRRARTALDHTRLPPELQNEHDHHENQFESEEDIRDFVEARIQESM
RTGQFDNLKNKGRPLPHQPSSTHEYAMRIMRDNGLRPHWLQLMHDIDSEK
RQLRNTLSHAWHTHMPHAPHRWALAVKIMELRIESVNKRVDTFNLVRPMS
VSHLFRLRLRINEEIERAMKSKLPTESEQYRMSGQPTASKEKQRADKSEP
RYSWQLFARFVRATEVREYKRPTWGRRKSDDESEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018961DnaJ_homolog_subfam-C_membr-28