Gvermi12661.t2 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi12661.t2
Unique NameGvermi12661.t2
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length169
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:136879..146404 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog521011.Mpal_0100
PFAMsPKD,Pilin_N,SdrD_B
Max annot lvl224756|Methanomicrobia
Evalue1.82e-08
EggNOG OGsCOG3291@1|root,arCOG02420@1|root,arCOG02420@2157|Archaea,arCOG02508@2157|Archaea,2XUY6@28890|Euryarchaeota,2NAFS@224756|Methanomicrobia
DescriptionPFAM PKD domain containing protein
COG categoryO
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12661Gvermi12661Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_425 136879..146422 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi12661.t2Gvermi12661.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_425 136879..146404 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi12661.t2.stop1Gvermi12661.t2.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_425 136879..136881 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi12661.t2.CDS1Gvermi12661.t2.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_425 136879..136928 -
Gvermi12661.t2.CDS2Gvermi12661.t2.CDS2Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_425 136998..137001 -
Gvermi12661.t2.CDS3Gvermi12661.t2.CDS3Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_425 145852..146267 -
Gvermi12661.t2.CDS4Gvermi12661.t2.CDS4Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_425 146368..146404 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi12661.t2.exon1Gvermi12661.t2.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_425 136879..136928 -
Gvermi12661.t2.exon2Gvermi12661.t2.exon2Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_425 136998..137001 -
Gvermi12661.t2.exon3Gvermi12661.t2.exon3Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_425 145852..146267 -
Gvermi12661.t2.exon4Gvermi12661.t2.exon4Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_425 146368..146404 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi12661.t2.intron1Gvermi12661.t2.intron1Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_425 136929..136997 -
Gvermi12661.t2.intron2Gvermi12661.t2.intron2Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_425 137002..145851 -
Gvermi12661.t2.intron3Gvermi12661.t2.intron3Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_425 146268..146367 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi12661.t2.start1Gvermi12661.t2.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_425 146402..146404 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi12661.t2 ID=Gvermi12661.t2|Name=Gvermi12661.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=169bp
MFLGLAAVHNQSLSTALSQSLLFNVGGPALPDISFVQDPTSNLLSSASAA
VNVSANAVSLASSWAPIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETY
EKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSL
TQVEAKVVGRIAKDECTP*
back to top

spliced messenger RNA

>Gvermi12661.t2 ID=Gvermi12661.t2|Name=Gvermi12661.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=507bp|location=Sequence derived from alignment at ScGOVlb_425:136879..146404- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTCTGGGACTTGCGGCGGTACATAACCAAAGCTTATCCACGGCTCT
TAGTCAAAGCCTCCTTTTCAATGTTGGCGGGCCAGCCTTACCGGACATCA
GTTTCGTGCAAGACCCGACATCGAACCTGCTGTCGTCCGCCTCAGCGGCG
GTGAACGTGTCGGCAAACGCTGTGTCTCTCGCGTCGTCATGGGCGCCGAT
ATACTCAAGCTACCGCTTTGCGTTCGGCGGCAATCTGTCGTACCGGTTCA
ACGTGCCCAACGGCAACTACAGCGTCTCGCTGGCGTTTGCGGAAACGTAC
GAGAAGGCGTTTTTCGCGGGCGCTCGGCAGTTCGACGTGGTGGTCAACGG
GCGGGTGTACTACGAGCGGCTGGACGTGTTCGCGACCGTCGGGGCCGGCC
AAGCGCTGTATCTGCGCGCGGACAATGTGGCGGTGGGCAGCGGCTCGCTG
ACCCAAGTGGAGGCAAAGGTTGTTGGTCGCATTGCGAAGGATGAATGCAC
ACCGTGA
back to top

protein sequence of Gvermi12661.t2

>Gvermi12661.t2 ID=Gvermi12661.t2|Name=Gvermi12661.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=169bp
MFLGLAAVHNQSLSTALSQSLLFNVGGPALPDISFVQDPTSNLLSSASAA
VNVSANAVSLASSWAPIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETY
EKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSL
TQVEAKVVGRIAKDECTP*
back to top

mRNA from alignment at ScGOVlb_425:136879..146404-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi12661.t2 ID=Gvermi12661.t2|Name=Gvermi12661.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=9526bp|location=Sequence derived from alignment at ScGOVlb_425:136879..146404- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTTTCTGGGACTTGCGGCGGTACATAACCAAAGCTGTGCATGTTTGCT
CCAGACTGCGGGCGACGTTAACAAGTGCTCACATGCGCGTCGGCAACATG
CTTGCTGCGGTTCTTTTTCCTTTCCTGTGCGTTGCAGTATCCACGGCTCT
TAGTCAAAGCCTCCTTTTCAATGTTGGCGGGCCAGCCTTACCGGACATCA
GTTTCGTGCAAGACCCGACATCGAACCTGCTGTCGTCCGCCTCAGCGGCG
GTGAACGTGTCGGCAAACGCTGTGTCTCTCGCGTCGTCATGGGCGCCGAT
ATACTCAAGCTACCGCTTTGCGTTCGGCGGCAATCTGTCGTACCGGTTCA
ACGTGCCCAACGGCAACTACAGCGTCTCGCTGGCGTTTGCGGAAACGTAC
GAGAAGGCGTTTTTCGCGGGCGCTCGGCAGTTCGACGTGGTGGTCAACGG
GCGGGTGTACTACGAGCGGCTGGACGTGTTCGCGACCGTCGGGGCCGGCC
AAGCGCTGTATCTGCGCGCGGACAATGTGGCGGTGGGCAGCGGCTCGCTG
ACCGTTTCCATGCGCAGAATCGCGGACAGACAGAACCCGTTCCTGAGCGC
GATGATCATCCAGCCGGCGGGGGTGTGACGACGGGGCGGCAATCTGTGAG
CGAGCGCCGGAAGCGGAGGGCGTGCTGGTTGGCTCTCGGAGATCGAAATG
TGGCGGAGCGCACAAGTGCGTTTATTGCGCACCGGGTGGGGCAGGGTGGG
GGAGATTTCCGTGCTGTTGCCAACTTGGGAGCGCGAGGGGGCACTTGGAC
TACACTTGGGAGCTGACAGCCATGGATGGCGATCAGCTGAATGCTGCTGA
TCGTCGATGCTCGCCTCTTGCTCACTGTGTGGCTGTTAAAGGTATTCGTG
CAGTACTTGAACTGCTGCAGTGAACTGGTGTTGCGCACGCGACTGCCTTC
TCTCCCGGGCGAACGTCTCCGTGCAGACGAGCGTCATCTCGCGTGAACTG
CAGCCCCTCGACGCCACAGCTGGCCGCAGCAAACGAGCAACACCTCACGC
GTGGCTCGCGTTGTTGGCCGCGACTCTCACAGCAGAGCGCGCATTGCTGT
GCGCTGTAAGCCTGCGCTGAAAGCCACGCAGATTCGCGAGCGCTCAGCGC
TCATGCACACGCGACGGGCCGTGATTGGTTCGGCTATTCTGAGCCGGTTT
GGTCAGCGAATAGGAGCGCATCAGCAGAGGGCATCGCTTAGCGCCGTGAA
AAGTGGCACGTGACGGCGGTGCCCGACAAGTGGAGGGCGCATAGCAGCCC
ACTGCAACACAGCGGAGGCGCCACAGGCAACAAGGCACAGCGTGAACACC
CAAGTGATTGGTGCGCAACAACGTGAACCCCGCCGCGTCCACTGTCCCCT
TAAATCTCACCCACCGCAAATTCCCCTCCACTGCACCGCACCTCCCCGCG
CAACCTCCTCCTCCCTCCGCCGCCTCCACATCCCGCCGCCGCCGCCTCCA
CATCCCGCCGCCGCCGCCTCCACATCCCGCCGCCGCCGCCTCCCATCCCG
CCGCCGCCGCCTCCCTCCGCCGCCGCCTCCCTCCGCCGCCTCCCGCCGCC
GCTTCCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGACGGGCGCCG
CCGTGGGCGCGACGCGAAGGCGCGCACAAGGCGGTGCCCCTCGCGCGTCT
CTCGAACGCGGTGCGCTCGCGAGTCGACGCCCGCGTCGCCCTTCCCGCGC
CGCCGGCGCCCGCCGCCTCGGGCGTGAGATTGTGCCCGCCCCCTCGCCGC
CCGCACCGCGCCGCGGCAGAGCGGATCGGAGCGGTGCGCGCGCCCACGCC
GCCGGCGCAGCCTCTTTTGTGCGTGCGATTGCATTGGCACCGACGTCGCC
GGCCGCCGCCGCGGCGCGCGCGCGCGCACGCGTTGTCGGCGCCACTGCAG
TCACACGCCCAAAAGCGGCTGCGCCGCCGGCGTGGCGGCGCTCCGCCCCG
CGCGCCTGCGAAACGGCCGCGTGCGGCTCGCTGGTGCGCGAGCGCCCGTC
GTGCACGCTCGAGCAGCGCTTGAGGCGCACCTCTGGTCACCGCCGGAGCC
GGCATGTCGCACTGGACCGCCGCGCACGTTCTCGCAAAGCATCCGCCCCA
GGTCTCCGCGCATTCATGCATTTGACAACGGCCCTTTCTGATGTTTCATG
AGGGCGACTTTGGTGTGTTGGGGAACTCATGGTGCGTTTGGGCGTCACAA
GCGCGTAGTGGCAGCCGTCTTGAGTGTGTTGAACTGTCAATTCACGAAGC
AAGTGTTGCACAGCCTTCTTGTCACTCTTTCCCGAAAGAGTTGTCTCTGT
GTCAGTGCAAGCAATGTGGTTTGAAGCTCTAAACGCTTGCACATTTCTAT
GACTCAATAAGTTCCTATGACATCTGCCCATAGTTTTCGTGGTCGCTTAC
CCTATTTTCTATCACATCACTCTCAGAGTGCGGTGTATTACCAAGTAGAA
GATGCAAATATTATTGAATACATTATGAGCTATACCTTTGTGGTTCATCA
TTGCACCACTCGACACATCATTGCCCATGAAGAAATAAGCCGGTGCCGGT
GCGAAGCTTGTCCTAGACTCATCCAAGATTCAAGCGAATCAAGTTGTGAC
CGTCATGCATCCATAAGATGGCGTGCACTATCGTTATCAGAGCGCATTAT
TTGAAGTCACGGTAATACGGGAAGCCGTCTGGATACATGTGGTGGCATGT
AAAACACGCTCCAACTTCCGGGAAATGTCCACAGATCAAAGACCGGTAAG
CCAGCCAACAAGTCTCTTCCAAGTAGTACTCGGCGTCGTCGGGGGGAAGA
TCTCGCTCTGAAATTCTCCTGTCGCAATAGTCACATCCATGAAAGCGAAA
CAATGTGCACAACGTGCTGCTGTACACTATGCAATCCTGAAATGTTGAAA
TGTTCACTTCGAGAGGTGGAATGCCATGCCGAATTGTAAACGGCTTGTCT
AGGTTGTCGTCGATCGAAAGCAGAGAGAAGCCGTTGTGCTCTCGCGGTAT
TCTGCTGAACTTCCGGAACCGTCGTGCATTGCGCCTAGTTGTTTGACTAG
AAAGCAGCACCACGAGCACGCTGCATAGCCCGACTGTAGCGAGCACAACC
CCTAAGCTCTTCAGTATCGTTGTCCAAGTTTTGCCTTCAGAAGACGAGAG
CTTCAGAGCAGAGTAAGAGACGGGTCGAGGATGACCACCGATGAAATCCA
TGTCGAAAAGTATAGACACAGAGCTTTTTACTATGAACCAAGATGAAGAA
ATGCCTCCTGACAAGCTCTAATCCCAACAGCTCTTGTAGCGAGAACGGAA
AAGTCCTTCCCGGGCTGGTTTTTTATGCTGAGCCGAGTCATCTTCTGCTC
TCGTGACATGTGACTCTCGAGGTAGAACGACAAACAGAGACATGCATCTC
TTGATTCACATGTACCTTACTGCTTTGGTCTCGGACATGATTGGTTATTA
TTGAGCTTGTATATCTCATCTCATGTCTATTTTGTTTCTGTCTCTAGTGA
CATTTGTTCTGCTTTCGATTAAAGCCCTGTTTGACATGTACGACTTTGAA
CACCTTTTTGAACTCATTTTTTATCACTTGTATAGATGGTTACTACACTG
CGTTAAATTTTATTGAAATCCGTGGAACGCATTTTAAGAAGATGTCAAAA
ACACTGTGCTACACAATACAATTATTGGAGATGGTTTTGTCACTTTTACT
GTTGGAGAACCAGGACCATTCCTTCAAACTTTTAGCCACATTCAATCGAC
TATACTATACTTTCAGCAAAAGCTTGTCGATAACAGGGCCAACACATCAT
TGTTAGCGAAAGATCTTTGACGGACTTGCGAGGCGGCAGCAATTTATTGA
ATATTTAATCTCTCATAGAAAATTCTTAATTCTTAAATGCCTTGGTGCAA
AAGGGGTACTTTGGACTGTTTCAGCGGAAAGTTTTATGAAACAATTAAAA
TGGCTCCCTATTTTAACAACCTCAACCACAGGCAGAAATTCTTTCGCTGT
GTAAAGGCTTTTGCACGCTGGTTGCACCTTACGTTAGAAAACATAACTAA
TGTACTACAGCCACTATGAGCACCAAACGGAACCAGACTGCTACGACATG
CATTTCGTATCAGCCAAGATGCGCCAGCGTCGTGATACCAGGCACCATCT
GACCGATCTTAAAAGTCAACTAAAGCAATTTCATCATCTTTTGTGAAACA
GGATGAATACCGATTAGATAGCTAGATAGGATATTGGTTTGCTCATTATT
ATGTAATGCTGAGTTTCGAAAACTGAGTTGATGTGGCTTCACGACACACA
TTGACTATCCAGGGTAGATTCTTTTGATGGGTTCGAACTCGAACACTAAC
ACTCTCGACATCATGCTCATTTTCTCAACAGCAACAAGACGTATCAGAGC
CTTACTGCCGTAAAGCACATCGATGGAAATGAGCAACTCACGCATTTTCA
AGACAACCGGTCGGCAAACCCGGTGCTCTTCTGGCCCAGAAAAAAAATAC
ATCATGGAACATTTTCGCTTGGCGATGATCGAGTATCAGGCAACAATATG
AAAATTATTCTCGGTACACCTGTATGATATGGACAACGGGAAATAGATAG
GCTGAGTTGCTCATGCTGCACCAGTGAGTTTCCCAAACTGCCGATTGTTC
TGTGGTTCTGCGGCTGTTTCACCAATGTACCAACACAGATTCATACAGTA
TCTGGTAGTACATAACAATGCAATGCCCTTCAAACATTAGAGTGTTTCTC
CATTTATGTACAGTCGAACAACGTCCTCTGCAACTGAACTCCAACCCTAT
GTACCTTCCCAGACAGATTACACCACCCAGGGCGATGTTTACCTTTCATA
CATCTGACAAGTTAGTACCTGCTTTTGTCGAGAATTGATCGGCACGGTAA
GCTTCCGGAACAAAGAGGATATTGCTAGTTTGCTGAAATCTCTTGTTCCC
ATCATTAGGCAAAATAAACACAGCTTTCTGTTTTAGGGATCAAGATTTTC
GAAGACACCCACAAACGTGCAGCTTGAGAAAACTGTAAACCAATATATAC
AGACACCGTGTTCTTCATGAATCTCAGTGCTGCTATGGAACCAAATTCAT
CGACAACCGCGTTGCCGGCCAGTATAAACTTACCGTATCCTGGATTTTCG
GTATAATGCATCACACCTTGTTAATCTTGCTTCACTTGTTCGGAATGCAC
CTACACGCTCCGATCGGACACAATAATCCACATCAAACTGCTTCTTGCAG
TCACAGGTATTTAAATCGAGGACTGTCCGACCTCGACCGCGACTCAGGGC
AAAGCGCTCAGCTGGGAATCCAAGGTATCCGAGTTTGAATTTTACGTTGG
GCATCACACACTTCCGTTCAACCTCTGACTCTGTTGCAATGGCATACTTT
TATCTTTTTTTGGCTATATATGGTCTCGTTGTCTCGGCGTCACCACTACC
CATAGAATCACAACAGTACAGCACGCTCTCACTGTGGCACAAAAGGAGCT
TCGAAAATGCAAGCATACCTTCAACGTCAGGTACAGTTGGTGTGCAAACT
AACGCTGTTTCTCAACCAGCGAGTTCTGCAATCATTGGTAGCTCTACGCC
CAACAGTGCTCCCGCAAGCGGTACGGGAGGCCCCGGGGGTAATGGAGGAA
ATGCGATTGCTCTAGGTGCTTCCGTGGTAGCTGGAATAGGGGGGGAGGGA
GGAGGAACTGGTATTTTCAACGGAGCTGCAGCGTCTGGGGCGGGAGGTGT
GGTGAATGTGTCTGGGGGAGGATCTGCCGTGCTCACCGGTAATTTCATCA
ACAGCGCCGTTGCTGGCCCGGGGGGGCCTGGTGGCAACGGTAATGGCGGT
GCATCTACCGAGGCCGCCTGAGACGTTTTGAGGAACATAAGCTTTCTGGA
AAACGGCCATGACTGACGCATGCGTCAAAAACTGCGAATGATAAAATAGT
GTTCTCAGGGAAACATCGAATGATGATTTTATGCAGTGATAAAGTATGTG
TTTTGCATGCATTACGTATGTCGTGAAACTCACGACTTGACGAGTAGCTT
TGTTTGCCTCAAAATATTCAGCACATTAATTTCCTTTGCGAAAATCGTGC
ATTGAAATGAGATATGTACGGCCCAAAATGTGATTACGAAACACAAATAA
TGGCTCTTTTTGGCTTCAGTGCGCATTGACCTTCACATCTGTTGAAACGG
AGTGAAACGAATGGTGCCTATGAAGTAGTGCACCTCTGACCTATCAAGAA
AAGACAGTGCATGTTCATGGATAAAGTAGTATTCATTGATTTAGGAAAAA
CAATTTCAGAAAAATCATTAATCTAAAAAGCGGTCAACACATGAATAGGT
ATGTGACGTGGCGCAGACAAAAACAAATCATGTGGTGGATGTGGCGACGC
GCAACGACTCCTGCCCCTCATGCACACCGCGTGCTTTTCCTCTGCAACCC
CTCGGCGACTCCGTGGCCACGCGCACACTTGGCCACCCACACACGTGGCT
CCCACTCTTAGACTCACATAAAATCACCCAGGAACCGCTCACCATGACCG
CCGCCGTTCCTGGGCATCTGTTCCGTCGTCATAAAGTAGTGGAAAGTACT
GTAGCTGACCTTTTTTTTCAGTCAGTTAAAACAGACAAAAATTAGATTTA
CATAGATTTTGAATAAGATCATGGCATAGAGTATTTCATACGGCGCAAGG
TACAAGCTGGAAAGTGCAGAACCCAAGAAAAAAAGAGTTTTTCTGCTGTT
GGGTTTCACCACACAATCTGAAACACGTGAGACACTAAAAGAAAAAAAGT
ACATTGTTCAGTTTTAGGGTGCGTGTCCGTTTTATTCGCTGAAGCACAAG
CTCGCCAAAGCGAAAGCTCCGCGCAGAGGGCTCGAAGAGAAAGCGTTCAG
CGACCGGCACCAAGCGAAAGTGATATGCACTTGGAGAGGTACTGCGATCG
AAAAGAGTGTGTTTCTGCAGTGCAAACAGTTGCTCTGACGAGGCCCGAGC
AAAATCGATGTCCTCAAACTGTCACAACAGGCGCACGAATCGTGACCCTA
TGTGTGCAGTAAATGCCTATTTGGTATTTTGAGGTTGTATCCAGTAATTG
CAGTCTTCTATAAATTCAAACTTTCAAATGGGCTTCCACTTGAACAAGCA
GTCGTCACTATGACTGTCCAAACATTTCTACCGTGCACGTACCCTGAAGC
CCTCCCTATTGCCGCATGGCACGCAGAACGTAATCCGTCGGCCAAAGTGC
CCCATCGCGCCGAGATGAACAGAATGACACTCGGTCTGGCCACTACAAAG
CCCGCTGCAGAAAACAGGATTGTTGCATCCTGTGCATCCATAGATCAAGT
TGGAACTCAAGTGAATCTCGGCATGTGCAGAGCATTGCTTTCACCACAAA
ACGACCCAGCGAGACATGGTCATCAGCTTCCATGACTCAGCCCATGATAT
GACGTTATTTTTAACCAAACAAGATATCTGCCATCTATTCACACAGTGCT
CCATGATGTAGCACATGATATGAGAGCAGGACAGCGGTGTGGTCCGTACC
TGGTCCGGTCCTCTGTCCACTACTACAGGTGTCTCACAACAACGGTTGCT
ACTTTATCACCACATTTCTCACAAAAACTTGAAAGTTAAAGGTTCAACAT
TTCCAACCGTGCAAATAAACAAGCATTACAATTTATCAGGCCACACCAGA
ACCATCCAGTTTCCTTCATGCATTGTTGGTTTCCCAGCACATCTCAAGTC
AAGTTCACATTTTCATGATCCTTCATGATCACTACTCCGCTGGTGCTGAT
CACATTGACTGTTTTCGGCCAATCATTGGATCACAAGTGATGCGCATTTT
ACCATTTCTGCATGAATACGTACTCCTTCAGTCCGTGGCGCTTTTCTCCA
AGTTACACCTGCAGCTTTTGCTGAGTACATGTAAGATTCTGGCTCGAATC
CCGATTGCGGCTGCAAGAGGATATTCAGGGTTTCACGCGACTAACAACTG
GTTTGCAGCACGCTTATATTGCTAAATTACATGAAAGCCACCGTTAAAGG
TAGATATTCATCTATTAGCAAAGTCAAAGAAATAGGACAGTATTTTGGTC
GGAGAAGCCTTTCGGATCAACAGCACAAGACTTTTGCAGCGAATCTGTTT
TTTTGTGTTAAAATGTACAAAAAGCTGAAAAGCTTCTATTTTGTTGTGGT
CCAAACCAAACTGTTGTGCGCGTTCTAGGCCTCGAAAACATCTGAAGGTA
GTCAAGATGCACGAAAAGATCCCCCCTTTTCTGCCTCTGTGCAATCATGA
CGGTGTCTGCAATTTCAAATGGAAGCGTGAAACTGTTCCGCTGGCGTGGA
TTCGGCCACTGGGTGTGATACGCGGAGTTCGGCGGTGCGCAGCCGATGCG
CGGTGCAGCGTAAAGTTGCTGGGTCGTGCGTGGCGCGTAGCGGTCGTGCG
GGAAGCAAGACCAGGGACGAACTGAGACCACTCTGCGATGTCTGTCCCCG
TCCCGGACCGGGCCGCAAGGCCAGCAGTTCTTGTTGCGCTCATGTACATG
TGCACGGGAGATTTGCGCGCCTCGGAGGTGCTTCGGAAGTGCAGATTATG
GAGCGCGCGCCGATTAAAAGTGCGGCAGAAGCCCGCCGCTGCAACAACCA
TACATATACACAGCTTTTAGATGCAGTCAGGCCCAATACCCGCCGAGAAA
ACCCCTCCACATGAAGCAAAAACCGCTTGCCCCTAAAACCCTAAGTGGCT
GCTGTGCGATCTTCGAAGAAATCTGGAGTTCCCGCTAGAGGGACTAAAAA
TGCCAAAGGAGATTTTATATCCGCTAAGACTCCAACTTACCCGGAGGGGT
GTACCCCGACACCCTGTAAAGGGAAGGCCCCTGAACCCACTAAAGGTAAG
GGGAGGACAAAGACCTCCGAGAAGAAAGGGTGGAAAAGCGGCAAAGGCGC
CCCACAGAAAGGGAGGGTCCGCAACTCACAATAATCCACCATCACGTACT
GACTGACACGTGAATCGAATGGAAGGCCATCGACATCTGTCATCATGAGT
CACCGTTTTTCGGTTTGCAACTTTTCGACAACGGATTTTCGTATTCAGCA
GGGCCCATTCGTTACAATGCTGCGTGATGAGGCGAAGCTGCTTGTCCTTG
CTGTAGATCCCAGAGAAGGATGCTGAAACACTTCTGCGGGCCATTCTTGA
AACGAGTGCTGGCTCGAGTATGACGACCTTGCCAACAACTAAATCCTTGT
CACCTCCGCCCCGTGTTCTTCTTTATCAACTCATTTTTCTAAAATCACTC
ATCTAATTCTCATGTTCTCATATTCTTTTTGTACTTGTCATTCATATCTA
TAGCAAGGTACGTGTCCAGAGTCATCGTCAATTGGCATAATATTATGCTG
ACTCGCTTTCATTTCCAAATATGCAGTGGAGGCAAAGGTTGTTGGTCGCA
TTGCGAAGGATGAATGCACACCGTGA
back to top

Coding sequence (CDS) from alignment at ScGOVlb_425:136879..146404-

>Gvermi12661.t2 ID=Gvermi12661.t2|Name=Gvermi12661.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=507bp|location=Sequence derived from alignment at ScGOVlb_425:136879..146404- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTTTCTGGGACTTGCGGCGGTACATAACCAAAGCTTATCCACGGCTCT
TAGTCAAAGCCTCCTTTTCAATGTTGGCGGGCCAGCCTTACCGGACATCA
GTTTCGTGCAAGACCCGACATCGAACCTGCTGTCGTCCGCCTCAGCGGCG
GTGAACGTGTCGGCAAACGCTGTGTCTCTCGCGTCGTCATGGGCGCCGAT
ATACTCAAGCTACCGCTTTGCGTTCGGCGGCAATCTGTCGTACCGGTTCA
ACGTGCCCAACGGCAACTACAGCGTCTCGCTGGCGTTTGCGGAAACGTAC
GAGAAGGCGTTTTTCGCGGGCGCTCGGCAGTTCGACGTGGTGGTCAACGG
GCGGGTGTACTACGAGCGGCTGGACGTGTTCGCGACCGTCGGGGCCGGCC
AAGCGCTGTATCTGCGCGCGGACAATGTGGCGGTGGGCAGCGGCTCGCTG
ACCCAAGTGGAGGCAAAGGTTGTTGGTCGCATTGCGAAGGATGAATGCAC
ACCGTGA
back to top