Gvermi12661.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12661.t1
Unique NameGvermi12661.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length162
Homology
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A2V3IK79_9FLOR (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK79_9FLOR)

HSP 1 Score: 184 bits (466), Expect = 1.520e-56
Identity = 93/142 (65.49%), Postives = 113/142 (79.58%), Query Frame = 0
Query:   12 QSLLFNVGGPALPDISFVQDPTSNLLSSASAAVNVSANAVSLASSWAPIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSLTQVEAKVVGR 153
            Q+LL NVGGP LP  +F +DPT+NLLSSASA+V + +N V L SSW PIYS+YR+AFGGN++YRFNV  GNYSV++AFAETY  AFF GARQFDVV+N  VY++RLDVFATVGA   LYLR D++A+  G LT V  +V GR
Sbjct:   20 QNLLLNVGGPDLPVANFARDPTANLLSSASASVALPSNTVPLNSSWGPIYSTYRYAFGGNIAYRFNVSKGNYSVAMAFAETYLPAFFVGARQFDVVINEVVYFKRLDVFATVGANSPLYLRVDDIAIADGQLTIVMQRVEGR 161          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A2V3IIF4_9FLOR (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIF4_9FLOR)

HSP 1 Score: 141 bits (356), Expect = 9.470e-40
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 0
Query:    8 TALSQSLLFNVGGPALPDISFVQDPTSNLLSSASAAVNVSANAVSLASSWAPIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSLTQVEAKVVGR 153
            TA++Q L FN+GGP+   I+F +DP  NLLS  +A +++  + V L SSW PIY +YR+A GGN+ YR  V  G YSV++ FAETY   F AG RQFD+++NG   + RLDVFATVGA   +YLR DN+   +G++T V  ++  R
Sbjct:   19 TAVAQPLRFNIGGPSFEAINFAEDPQLNLLSPNTAIISLPPSTVPLNSSWQPIYDTYRYALGGNIGYRIPVAPGMYSVAVGFAETYPPNFQAGKRQFDLLINGVPRFNRLDVFATVGANSPMYLRTDNIPDRNGTITIVVRRISSR 164          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A2V3IZI0_9FLOR (Malectin-A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZI0_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 1.580e-22
Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 0
Query:    6 VSTALSQSLLFNVGGPALPDISFVQDPTSNLLSSASAAVNVSANAVSLASSWAPIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSLTQVEAKVVGR 153
            +S A +  L  N GG AL  I+F +D  + +    S  +++    V  + +W P+Y SYR+A  GNL Y+  VP+  Y+V+L FAETY   F  GAR F V++NG    + LDVFAT G+  AL+L   N++  +G +T   A++ G+
Sbjct:   24 LSVAAAAPLRINCGGDALQSIAFREDLPAYVSPENSIPLSIPKGTVQASGTWQPVYDSYRYAPSGNLQYKIPVPSATYTVALMFAETYAPLFKKGARIFSVLINGVNKLDALDVFATSGSNNALFLSFGNISPVAGFITITLARIPGK 171          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A7V1ENT8_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7V1ENT8_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 7.860e-10
Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   59 PIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSL 143
            P++ S R+   G  SY+F+VP+GNY V+L FAE Y      G R FDV V G +  + LD+FATVG   A ++    V V  G L
Sbjct:   11 PLFQSERY---GMNSYKFDVPDGNYDVTLCFAEIYFNT--TGKRVFDVNVEGNLIVDDLDIFATVGKDAAYFVNVPGVTVADGQL 90          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A3C0L0S8_9GAMM (Beta-glucanase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0L0S8_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 2.460e-9
Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   59 PIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATV-GAGQALYLRA-DNVAVGSGSLTQVEAKVV 151
            P+Y SYR    G  +Y F VPNG+Y+V+L FAE +++A   G+R FDV+V G+  +++LDV A   G  QA   R  D++AV  G L +VE K V
Sbjct:   62 PLYQSYRL---GEQAYDFEVPNGDYAVTLHFAEPFDQA--VGSRVFDVLVQGQPIFQQLDVRANRDGHHQAALSRTVDHIAVSDGRL-EVELKAV 150          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A858RKQ0_9BACT (Uncharacterized protein n=1 Tax=Luteolibacter luteus TaxID=2728835 RepID=A0A858RKQ0_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 3.040e-9
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 0
Query:   69 GGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSLT 144
            G  L Y+  VPNG+Y V L FAE +  A+  G R FDV++ G +    LDVFA VGA +AL + A  V V  G LT
Sbjct: 1879 GAELKYQLTVPNGDYEVRLHFAEVWPGAYATGIRVFDVLMEGALAINDLDVFARVGANRALVI-ATPVTVADGKLT 1953          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A7C4QC66_9BACT (Malectin domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C4QC66_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 1.860e-8
Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = 0
Query:   60 IYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSLT 144
            +Y + R+   GN +YRF++PNG Y V+L FAETY  +  AGAR F V + G      LD++A VGA  A Y R   V V  G LT
Sbjct:  754 LYQTERY---GNPTYRFDIPNGTYEVTLKFAETYWTS--AGARIFSVSIEGVTVINNLDIYAQVGANYA-YDRTFVVEVTDGQLT 832          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A2W5YRE4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A2W5YRE4_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 6.320e-8
Identity = 52/141 (36.88%), Postives = 74/141 (52.48%), Query Frame = 0
Query:   11 SQSLLFNVGGPALPDISFVQDPTSNLLSSASAAVNVSANAVSLASSWAPIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSLTQVEAKVV 151
            SQ++L N GGPA  D S  QD ++++  +  +  + +A AVS  +S   +Y + RF+    L+Y   VPNGNY V+L +AE Y      G R FDV + G+      D++A  G   A+  R    AV  GSL  VE   V
Sbjct:   42 SQTILINSGGPAYTD-STAQDWSADIDFANGSTASYTA-AVS-GTSDPTLYQTERFS--QTLTYHVPVPNGNYEVTLYYAENYFTG--TGKRVFDVAIEGQTVLPNFDIYAVAGKNAAVQ-RTFITAVSDGSLDIVETASV 174          
BLAST of Gvermi12661.t1 vs. uniprot
Match: A0A1M7PED7_9BACT (PKD repeat-containing protein (Fragment) n=1 Tax=Cyclobacterium lianum TaxID=388280 RepID=A0A1M7PED7_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 9.100e-8
Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 0
Query:   64 YRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSL 143
            Y   FG N  Y F + NG+Y+V +   E Y  A  AGAR FD+++ G V  + LD+FA  G G AL +  +NV V  G L
Sbjct:  390 YPRRFGANFGYNFPIANGDYTVRVHMVENYHNA--AGARIFDIIMEGDVVQDNLDLFAVFGRG-ALGIIQNNVTVSDGEL 466          
BLAST of Gvermi12661.t1 vs. uniprot
Match: B9M0U3_GEODF (Malectin domain pair protein n=2 Tax=Geotalea TaxID=2910589 RepID=B9M0U3_GEODF)

HSP 1 Score: 60.1 bits (144), Expect = 1.430e-7
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 0
Query:   60 IYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAGARQFDVVVNGRVYYERLDVFATVGAGQALYLRAD-NVAVGSGSLTQVEAKVVGRIAKDECTP 161
            +Y S R+   GN SY   V NGNYS++L FAE Y  A  AG R F V VNG+     LD+FA VG   A  +    NV  G+ ++     +  G+I+  + +P
Sbjct:  252 LYQSERW---GNFSYSIPVANGNYSLTLKFAEIYFSA--AGQRVFSVTVNGQTVISNLDIFAKVGKNVAYDVVIPINVTTGAVTIGFTSTRDYGKISAIKISP 349          
The following BLAST results are available for this feature:
BLAST of Gvermi12661.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3IK79_9FLOR1.520e-5665.49Malectin domain-containing protein n=1 Tax=Gracila... [more]
A0A2V3IIF4_9FLOR9.470e-4049.32Malectin domain-containing protein n=1 Tax=Gracila... [more]
A0A2V3IZI0_9FLOR1.580e-2238.51Malectin-A n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
A0A7V1ENT8_9BACT7.860e-1043.53T9SS type A sorting domain-containing protein n=1 ... [more]
A0A3C0L0S8_9GAMM2.460e-945.26Beta-glucanase n=1 Tax=Gammaproteobacteria bacteri... [more]
A0A858RKQ0_9BACT3.040e-947.37Uncharacterized protein n=1 Tax=Luteolibacter lute... [more]
A0A7C4QC66_9BACT1.860e-845.88Malectin domain-containing protein n=1 Tax=bacteri... [more]
A0A2W5YRE4_9BACT6.320e-836.88Uncharacterized protein (Fragment) n=1 Tax=Chthoni... [more]
A0A1M7PED7_9BACT9.100e-842.50PKD repeat-containing protein (Fragment) n=1 Tax=C... [more]
B9M0U3_GEODF1.430e-738.83Malectin domain pair protein n=2 Tax=Geotalea TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.430coord: 13..157
e-value: 5.2E-22
score: 80.4
IPR021720Malectin domainPFAMPF11721Malectincoord: 25..145
e-value: 3.9E-16
score: 59.6
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 53..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:136879..146422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12661.t1Gvermi12661.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 136879..146422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12661.t1 ID=Gvermi12661.t1|Name=Gvermi12661.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=162bp
LRKGNVSTALSQSLLFNVGGPALPDISFVQDPTSNLLSSASAAVNVSANA
VSLASSWAPIYSSYRFAFGGNLSYRFNVPNGNYSVSLAFAETYEKAFFAG
ARQFDVVVNGRVYYERLDVFATVGAGQALYLRADNVAVGSGSLTQVEAKV
VGRIAKDECTP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021720Malectin_dom
IPR008979Galactose-bd-like_sf