Gvermi12818.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12818.t1
Unique NameGvermi12818.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length184
Homology
BLAST of Gvermi12818.t1 vs. uniprot
Match: A0A2V3J1S0_9FLOR (DNL-type zinc finger protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1S0_9FLOR)

HSP 1 Score: 186 bits (472), Expect = 5.010e-57
Identity = 97/161 (60.25%), Postives = 115/161 (71.43%), Query Frame = 0
Query:   12 KLTHRLNGRTRTSCKPKILVSAKSEKGLPNRLPSGKGDSSARSEGKVGFVGSDTIGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRVSSATFDLEKLVSTVIDGDNINENGTFRESENPG 172
            KL   L GR         + SA   KG   +LP+GK  S   +  KVGFVGS+TIGISFTCNAN CNQRITKTIKR+SYEKGTVLIQCPSC KHH+IADNMGMY HLTGG+KNVEEIA+ AG+N TRV+ + F LEKL S V++ D   E+G   + ++ G
Sbjct:   16 KLNQSLGGRNSFLVP---VCSADERKGQSKKLPAGKRVSRPANGQKVGFVGSETIGISFTCNANECNQRITKTIKRRSYEKGTVLIQCPSCGKHHIIADNMGMYTHLTGGKKNVEEIAKSAGLNFTRVNPSVFGLEKLNSQVVEDDESGEHGASPKGKSDG 173          
BLAST of Gvermi12818.t1 vs. uniprot
Match: R7QFS4_CHOCR (DNL-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFS4_CHOCR)

HSP 1 Score: 148 bits (374), Expect = 2.600e-42
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 0
Query:    2 AYLFISPL-LPKLTHRLNGRTRTSCKPKILVSAKSEKGLPNR--LPSGKGD-SSARSEG-KVGFVGSDTIGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRVSSATFDLEKLVS 151
            A+ F +PL  P+  + L+ R        I +  KS KG  +   LP G G+ SS+ S+G KV FVG+D +GISFTC+A  C +R+TK++KR+SYEKGTVLI+CP C KHH+IADN GM+AHLTGGRKNVEEIA+D G   TRV + +F L+   S
Sbjct:   17 AFSFAAPLNSPRRRYILSNRPNG-----IYMKEKSGKGSSSARPLPQGFGNKSSSASDGEKVAFVGNDKLGISFTCDAQGCGERVTKSVKRRSYEKGTVLIRCPKCEKHHIIADNTGMFAHLTGGRKNVEEIAKDTGAAFTRVGTDSFQLDNSYS 166          
BLAST of Gvermi12818.t1 vs. uniprot
Match: A0A1X6PBA5_PORUM (DNL-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBA5_PORUM)

HSP 1 Score: 111 bits (277), Expect = 3.300e-27
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 0
Query:   45 SGKGDSSARSEGKVGFVGSDTIGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRVSSATFDLEKLVSTVIDG 156
            SG+  S    +G +GFVG+D + I FTC    C+ RI+K I R SYEKG VLIQCPSC K HVIADN+G ++ LTGG+KNVEE+    G  VTRV++  ++LE+L++  + G
Sbjct:   76 SGEAASVDGGDGTLGFVGNDKMHIMFTCGV--CDTRISKPISRTSYEKGVVLIQCPSCEKRHVIADNLGHFSQLTGGKKNVEEMV---GGQVTRVNTDVYNLERLLADDLKG 182          
BLAST of Gvermi12818.t1 vs. uniprot
Match: A0A3M7R1K2_BRAPC (DNL-type zinc finger n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7R1K2_BRAPC)

HSP 1 Score: 79.7 bits (195), Expect = 1.100e-15
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 0
Query:   66 IGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTR 138
            + ISFTC    C++RI++T  ++SYEKG VLI+CP C  HH+IADN+G ++ L G +KN+EEI  + G  V R
Sbjct:   53 LAISFTCKV--CDERISRTFHKQSYEKGVVLIKCPKCLNHHIIADNLGWFSDLRG-KKNIEEILLEKGETVKR 122          
BLAST of Gvermi12818.t1 vs. uniprot
Match: A0A814JJP8_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814JJP8_9BILA)

HSP 1 Score: 79.7 bits (195), Expect = 5.960e-15
Identity = 35/75 (46.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query:   66 IGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRVS 140
            + ISFTC    C++R+++T  ++SYEKG V+I+CP C  HH+IADN+G ++ L G ++N+EEI  + G  V R+S
Sbjct:   56 LAISFTCKV--CDERVSRTFHKQSYEKGVVIIKCPKCLNHHIIADNLGWFSDLKG-KRNIEEILAEKGETVKRLS 127          
BLAST of Gvermi12818.t1 vs. uniprot
Match: UPI001B7EC4C4 (DNL-type zinc finger protein n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7EC4C4)

HSP 1 Score: 78.6 bits (192), Expect = 1.960e-14
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 0
Query:   50 SSARSEGKVGFVGSDTIGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRVS 140
            ++ RS   VG + S    + +TC    C+ R TK I + +Y+KG V++ CP C KHH+IADN+G ++ L G +KN+EEI    G  V RVS
Sbjct:  122 AAVRSSELVGKINSTHYHLVYTCKV--CSTRSTKKISKTAYKKGVVIVTCPGCKKHHIIADNLGWFSDLEG-KKNIEEILASKGEKVRRVS 209          
BLAST of Gvermi12818.t1 vs. uniprot
Match: A0A8B9P895_APTOW (DNL-type zinc finger n=2 Tax=Palaeognathae TaxID=8783 RepID=A0A8B9P895_APTOW)

HSP 1 Score: 75.9 bits (185), Expect = 5.360e-14
Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 0
Query:   19 GRTRTSCKPKILVSAKSEKGLPNRLPSGKGDSSARSEGKVGFVGSDTIGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRV 139
            GR R + +P+    A    G P R    +G  SA + G VG + +    + +TC    C  R  KTI + +Y KG V+++CP C  HHVIADN+G ++ L G ++NVEEI    G  V RV
Sbjct:   23 GRRRFAPRPRAAAPAL---GGPLR----RGVCSAAAPGPVGRLEATHYQLVYTCKV--CQTRSAKTISKLAYHKGVVIVKCPGCKNHHVIADNLGWFSDLEG-KRNVEEILAAKGEKVRRV 133          
BLAST of Gvermi12818.t1 vs. uniprot
Match: UPI00145B60D8 (DNL-type zinc finger protein-like n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI00145B60D8)

HSP 1 Score: 76.6 bits (187), Expect = 7.590e-14
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 0
Query:   27 PKILVSAKSEKGLPNRLPSG-------KGDSSARSEGKVGFVGSDTIGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRVS 140
            P  L S +S   L N  PS           ++ RS   VG + S    + +TC    C+ R TK I + +Y+ G V++ CP C KHH+IADN+G ++ L G +KN+EEI    G  V RVS
Sbjct:   73 PFSLFSGRSLSALNNGNPSSIVHSKPFSTSAAVRSSDAVGKIHSTHYHLVYTCKV--CSTRSTKKISKIAYKNGVVIVTCPGCKKHHIIADNLGWFSDLEG-KKNIEEILAAKGEKVRRVS 190          
BLAST of Gvermi12818.t1 vs. uniprot
Match: A0A1E3JN60_9TREE (DNL-type domain-containing protein n=2 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3JN60_9TREE)

HSP 1 Score: 75.1 bits (183), Expect = 8.490e-14
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   68 ISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAH-LTGGR-KNVEEIARDAGVNVTRVSSATFD 145
            ++FTC A+SC  R +    +KSYEKG VL+QCPSC   H+IAD++G +   + GG+ KNVE+I R  G  V R     FD
Sbjct:   77 MTFTCTADSCGHRSSHEFAKKSYEKGIVLVQCPSCKARHLIADHLGWFKESMEGGKLKNVEDILRTRGEKVKR-GKVNFD 155          
BLAST of Gvermi12818.t1 vs. uniprot
Match: A0A0D0DP41_9AGAM (DNL-type domain-containing protein n=1 Tax=Paxillus rubicundulus Ve08.2h10 TaxID=930991 RepID=A0A0D0DP41_9AGAM)

HSP 1 Score: 75.1 bits (183), Expect = 1.010e-13
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0
Query:   66 IGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCPSCNKHHVIADNMGMYAHLT--GGRKNVEEIARDAGVNV 136
            + I+FTC A++CN R   T  ++SYE+G V+IQCPSC   H+IADN+G +   T  G  +N+E++ R  G  V
Sbjct:   83 LAIAFTCTADACNHRSAHTFTKRSYERGIVIIQCPSCKNRHLIADNLGWFEDRTEEGHLRNIEDVLRARGEQV 155          
The following BLAST results are available for this feature:
BLAST of Gvermi12818.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1S0_9FLOR5.010e-5760.25DNL-type zinc finger protein n=1 Tax=Gracilariopsi... [more]
R7QFS4_CHOCR2.600e-4252.90DNL-type domain-containing protein n=1 Tax=Chondru... [more]
A0A1X6PBA5_PORUM3.300e-2751.79DNL-type domain-containing protein n=1 Tax=Porphyr... [more]
A0A3M7R1K2_BRAPC1.100e-1550.68DNL-type zinc finger n=1 Tax=Brachionus plicatilis... [more]
A0A814JJP8_9BILA5.960e-1546.67Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
UPI001B7EC4C41.960e-1442.86DNL-type zinc finger protein n=1 Tax=Polyodon spat... [more]
A0A8B9P895_APTOW5.360e-1438.84DNL-type zinc finger n=2 Tax=Palaeognathae TaxID=8... [more]
UPI00145B60D87.590e-1438.02DNL-type zinc finger protein-like n=1 Tax=Acipense... [more]
A0A1E3JN60_9TREE8.490e-1447.50DNL-type domain-containing protein n=2 Tax=Cryptoc... [more]
A0A0D0DP41_9AGAM1.010e-1345.21DNL-type domain-containing protein n=1 Tax=Paxillu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007853Zinc finger, DNL-typePFAMPF05180zf-DNLcoord: 68..133
e-value: 5.9E-21
score: 74.2
IPR007853Zinc finger, DNL-typePROSITEPS51501ZF_DNLcoord: 61..161
score: 12.719891
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..183
NoneNo IPR availablePANTHERPTHR20922:SF13DNL-TYPE ZINC FINGER PROTEINcoord: 37..149
IPR024158Mitochondrial import protein TIM15PANTHERPTHR20922UNCHARACTERIZEDcoord: 37..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1683873..1684509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12818.t1Gvermi12818.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1683873..1684509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12818.t1 ID=Gvermi12818.t1|Name=Gvermi12818.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=184bp
MAYLFISPLLPKLTHRLNGRTRTSCKPKILVSAKSEKGLPNRLPSGKGDS
SARSEGKVGFVGSDTIGISFTCNANSCNQRITKTIKRKSYEKGTVLIQCP
SCNKHHVIADNMGMYAHLTGGRKNVEEIARDAGVNVTRVSSATFDLEKLV
STVIDGDNINENGTFRESENPGPRDQEPTEENN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007853Znf_DNL-typ
IPR024158Mt_import_TIM15