Gvermi12663.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12663.t1
Unique NameGvermi12663.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length489
Homology
BLAST of Gvermi12663.t1 vs. uniprot
Match: A0A2V3J0V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V9_9FLOR)

HSP 1 Score: 261 bits (667), Expect = 4.180e-78
Identity = 176/474 (37.13%), Postives = 255/474 (53.80%), Query Frame = 0
Query:   15 GLDFTPEFTLSTIQFGNEALNTVTTSLLTALIIANLVSIINRLILLTRPDVFNYRSYARSHVFQNSDDPLRIWSWMRGWYDFRA-------NGPRATSPLHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYSLTQEDVVARPIVKQQD---LLRVCYPIPLKSDLGAVRSTASYCSFSLSPGDVNEMANLVKVLETTSTGRLVAAAYSPNTGVMLSIIASGQLLQASASFIEW-RTENGDFYHSLLSSWDGQRFIEAITVGLSFAMNETCKSVGITEQKDSNFVFSVGFVDC--AFNANEAFTYVTASVRESMRFRKQKQTALRVLDKGDEMSEARQT-CPVDVTVQRPMINIVPLLVGLTLAFCLNVAVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTAGRCMQVARRGLR 474
            G+D+TP  T+STIQF NE +NTV TSL+   ++ NL SIINRL+ ++    FNYRS+ R+ +F +SDD  R+  W +G   + +        G RA   L+ R+ +R LL+P+CARI ++V +I SIAL +P +K   +C R DY      V   P   ++    L R+C  IP+ +  G V S  SYCS  L P D N +       E+T+    V A Y    G+++S            SF+EW R  NG+ Y S +  W  +R +     G+S   N  C               ++G + C  A +     + V  +VR+S+ + K + T  R    G E    +Q  CPV ++V+RP++NIVPLLV L + + LN AV  TVSH+G+ MDA F LV+E LGHD  +NPL+ S    +++ + L+   CADG S H GF+ G+GD VVEEF   +   +C Q   +G R
Sbjct:    6 GVDYTPLLTISTIQFENEVVNTVATSLIVVFLLTNLGSIINRLVFISDKTQFNYRSFLRAFIFMHSDDITRLAYWWKGKNPYLSLLNPGGSGGGRAQRMLN-RVQRRRLLLPVCARILLVVSSIASIALTIPGKKTFSSCGRADYEPQMGSV--SPNFSEEPGGVLTRLCRDIPINTKRGDVSSKVSYCSTVL-PLDTNALFE-----ESTA----VIAGYWEQGGLLISGYTVNGRSNLVLSFVEWQRGVNGNIYRSHIRQWSPERHLGVCAEGISRDRNRACTIQSTRNDSIQGVGVTLGLLSCDDAPDLQSGSSLVAGAVRDSLGWVKFRSTIQRSKLTGGEFRIPQQRECPVVISVERPVVNIVPLLVALVMMYTLNYAVNETVSHKGDIMDALFLLVKETLGHDCTSNPLEDSGGEKEVDVLQLQRFECADGRSAHIGFLRGRGDRVVEEFSDGKLVHQCYQTRAQGPR 466          
BLAST of Gvermi12663.t1 vs. uniprot
Match: R7QQN3_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN3_CHOCR)

HSP 1 Score: 233 bits (593), Expect = 1.550e-66
Identity = 160/472 (33.90%), Postives = 247/472 (52.33%), Query Frame = 0
Query:   12 LLDGLDFTPEFTLSTIQFGNEALNTVTTSLLTALIIANLVSIINRLILLTRPDVFNYRSYARSHVFQNSDDPLRIWSWMRGWYDFRANGPRATSPLHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYSLTQEDVVARPIVKQQDLLRVCYPIPLKSDLGAVRSTASYCSFSLSPGD---VNEMANLVKVLETTSTGRLVAAAYSPNTGVMLSIIASGQLLQASASFIEW------RTENGDFYHSLLSSWDGQRFIEAITVGLSFAMNETCKSVGITEQ---KDSNFVFSVGFVDCAFNANEAFTYVTASVRESMRFRKQKQTAL-RVLDKGDEMSEARQT--CPVDVTVQRPMINIVPLLVGLTLAFCLNVAVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTAGRCMQV 468
            LL  L+ TP+F+ ST+Q  ++ +N +  SLLT  +I+N++S+ ++LI  +R   F Y S+ RS +F NSDDP+RI+SW+   Y ++  G    +     I  R LL+PL AR+ +LV  I S+A+++P EKRL  C +GD+ +  +  V +P     DL RVC  IPL + LG VRS  SYCS  +  G    V+E    +  + TT +G+L  A  S N               ASA +I+W      R  +     + +   D    ++ I   L     + C + G +++   +D++ +     +DC F+       V A V  S+   K ++  +   L+      E R+T  CP+DV V RP++NI+PL + L L   +NV V +  S RGNA D  FH+++E LGHDT +NPL+ ++   +   + LR   C  G + H+GF+   GD  V+ FDS      C QV
Sbjct:    3 LLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKG---CTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRIHMDPNVRKPA---PDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVSEGEGGIVTI-TTESGQLWTALVSKNKTA------------ASAFYIQWVKNRRQRDNDKSLLFTNVEKIDSDDHLQVIANALRSETVQQCTAKGTSDKLPSEDNSLIAKAQILDCDFDPLSLIARVQAYVTGSLTLNKLRRGEMDNRLELNPLTDEVRETAACPIDVVVSRPIVNILPLALMLVLWGIINVLVSIYTSRRGNAFDMGFHIIKEALGHDTTSNPLEENSNRGEAMELPLRKWRCGAGAA-HEGFIGRDGDVPVQGFDSFTNVCGCTQV 454          
BLAST of Gvermi12663.t1 vs. uniprot
Match: A0A2V3II47_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II47_9FLOR)

HSP 1 Score: 184 bits (466), Expect = 2.090e-49
Identity = 137/465 (29.46%), Postives = 221/465 (47.53%), Query Frame = 0
Query:   14 DGLDFTPEFTLSTIQFGNEALNTVTTSLLTALIIANLVSIINRLILLTRPDVFNYRSYARSHVFQNSDDPLRIWSWMRGWYDFR-ANGPRATSPLHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYSLTQEDVVARPIVKQQDLLRVCYPIPLKSDLGAVRSTASYCSFSLSPGDVNEMANLVKVLETTSTGRLVAAAYSPNTGVMLSIIASGQLLQASASFIEWRTENGDFYHSLLSSWDGQRFIEAITVGLSFAMNETCKSVGITEQKDS-NFVFSVGFVDCAFNANEAFTYVTASVRESMRFRKQKQTALRV--LDKGDEMSEARQTCPVDVTVQRPMINIVPLLVGLTLAFCLNVAVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTAGRCMQVARRGLR 474
            +GL F P  TLSTIQF ++ LN++  +L+T +IIAN  SI+N+L+ +++ DVF++ SY R+ VF NSDDP   +S +RG Y F   NG    S    ++ K+LL+VPL AR +                         D++          +V + + LRV                         PG                   L+ A      G + S++ S + +      ++W   NGD +HS +S+++    +  +   +      TC+   +    DS N VF    +DCAF   + F+ +  ++ +S+ F++Q++ ALR      G  + ++R TC  ++T+ RP++N++ L++G   AF +N      +S R +     FH+VRE+LGHDT ANPLQ     +  + V +R  VC +  S H  FM G GD VV+  +  +    C Q+A  G R
Sbjct:   26 EGLKFNPNLTLSTIQFSSDNLNSIVAALITTIIIANPQSIVNKLVAVSKQDVFSFNSYRRAFVFANSDDPSLGFSCLRGRYGFGFGNG----SHTQLKLRKKLLIVPLFARYS-------------------------DFA---------KVVSKTEELRV-------------------------PG-------------------LLMAGQDLKIGALFSVLVSCKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPTKSTCEIRRVEPISDSANGVFMAS-LDCAFPPEKEFSTLLVAMTKSLHFQEQEEVALRHRRFANGSSVMDSR-TCAAEITINRPLMNLILLVIGAVAAFAVNKTTAALLSCRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTIRRFVCINEESAHVCFMEGDGDRVVQHLEDSRHVACCSQIACVGRR 406          
BLAST of Gvermi12663.t1 vs. uniprot
Match: R7QI75_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI75_CHOCR)

HSP 1 Score: 141 bits (355), Expect = 8.750e-35
Identity = 99/296 (33.45%), Postives = 154/296 (52.03%), Query Frame = 0
Query:   12 LLDGLDFTPEFTLSTIQFGNEALNTVTTSLLTALIIANLVSIINRLILLTRPDVFNYRSYARSHVFQNSDDPLRIWSWMRGWYDFRANGPRATSPLHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRGDYSLTQEDVVARPIVKQQDLLRVCYPIPLKSDLGAVRSTASYCSFSLSPGD---VNEMANLVKVLETTSTGRLVAAAYSPNTGVMLSIIASGQLLQASASFIEW------RTENGDFYHSLLSSWDGQRFIEAITVGLSFAMNETCKSVGITEQKDS 298
            LL  L+ TP+F+ ST+Q  ++ +N +  SLLT  +I+N++S+ ++LI  +R   F Y S+ RS +F NSDDP+RI+SW+   Y ++  G    +     I  R LL+PL AR+ +LV  I S+A+++P EKRL  C +GD+ +  +  V +P     DL RVC  IPL + LG VRS  SYCS  +  G    V+E    +  + TT +G+L  A  S N               ASA +I+W      R  +     + +   D    ++ I   L     + C + G +++  S
Sbjct:    3 LLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKG---CTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRIHMDPNVRKPA---PDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVSEGEGGIVTI-TTESGQLWTALVSKNNTA------------ASAFYIQWVKNRRQRDNDKSLLFTNVEKIDSDDHLQVIANALRSETVQQCTAKGTSDKLPS 279          
BLAST of Gvermi12663.t1 vs. uniprot
Match: A0A2V3II31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II31_9FLOR)

HSP 1 Score: 140 bits (354), Expect = 1.370e-34
Identity = 84/284 (29.58%), Postives = 143/284 (50.35%), Query Frame = 0
Query:  193 CSFSLSPGDVNEMANLVKVLETTSTGRLVAAAYSPNTGVMLSIIASGQLLQASASFIEWRTENGDFYHSLLSSWDGQRFIEAITVGLSFAMNETCKSVGITEQKDSNFVFSVGFVDCAFNANEAFTYVTASVRESMRFRKQKQTALR--VLDKGDEMSEARQTCPVDVTVQRPMINIVPLLVGLTLAFCLNVAVGVTVSHRGNAMDAAFHLVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGDTVVEEFDSRQTAGRCMQVARRGLR 474
            CSF L   D ++ A +V   E      L+ A      G + S++ S + +      ++W   NGD +HS +S+++    +  +   +    N TC+   +    DS     +  +DCAF   +    V  +V +S+  ++Q++ ALR      G  + ++R T   ++T++RP++N++ L++G   AF +N      +S R +     FH+VRE+LGHDT ANPLQ     +  + V ++  VC +G S H GFM G GD VV+  ++ +    C Q+A  G R
Sbjct:    2 CSFLLPIID-SDFAKVVSKTEELRVPGLLMAVQDLKIGALFSVLVSSKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPNNSTCEIRRVEPISDSANGVVMASLDCAFPPEKVLNTVLVAVTKSLHLQEQEEVALRHRTFANGSSVMDSR-TWAAEITIKRPLMNLILLVIGAVAAFAVNKTTAALLSSRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTMQRFVCINGESAHVGFMEGDGDRVVQHLENIRHVACCSQIACEGRR 283          
The following BLAST results are available for this feature:
BLAST of Gvermi12663.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J0V9_9FLOR4.180e-7837.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQN3_CHOCR1.550e-6633.90Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A2V3II47_9FLOR2.090e-4929.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI75_CHOCR8.750e-3533.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3II31_9FLOR1.370e-3429.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 389..488
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 367..388
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..138
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 367..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:174570..176036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12663.t1Gvermi12663.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 174570..176036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12663.t1 ID=Gvermi12663.t1|Name=Gvermi12663.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=489bp
MDASNAKTTTLLLDGLDFTPEFTLSTIQFGNEALNTVTTSLLTALIIANL
VSIINRLILLTRPDVFNYRSYARSHVFQNSDDPLRIWSWMRGWYDFRANG
PRATSPLHYRISKRLLLVPLCARIAVLVVTIGSIALALPYEKRLDACSRG
DYSLTQEDVVARPIVKQQDLLRVCYPIPLKSDLGAVRSTASYCSFSLSPG
DVNEMANLVKVLETTSTGRLVAAAYSPNTGVMLSIIASGQLLQASASFIE
WRTENGDFYHSLLSSWDGQRFIEAITVGLSFAMNETCKSVGITEQKDSNF
VFSVGFVDCAFNANEAFTYVTASVRESMRFRKQKQTALRVLDKGDEMSEA
RQTCPVDVTVQRPMINIVPLLVGLTLAFCLNVAVGVTVSHRGNAMDAAFH
LVREVLGHDTGANPLQVSARGDDIENVALRNRVCADGISGHKGFMHGQGD
TVVEEFDSRQTAGRCMQVARRGLRNMNEIVSEKGGNAV*
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