Gvermi12660.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12660.t1
Unique NameGvermi12660.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length424
Homology
BLAST of Gvermi12660.t1 vs. uniprot
Match: A0A2V3J6I6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I6_9FLOR)

HSP 1 Score: 189 bits (481), Expect = 1.340e-52
Identity = 118/375 (31.47%), Postives = 197/375 (52.53%), Query Frame = 0
Query:   30 LRRILLDNYIQFHQKQRLKAEEAKTHYAVIRTLVYHGRSWR-GLGDRLRGVIQAYLLAVATNRVLLIDWQYPFPLTQVLNSESESGNFLFNSTVFAETHRKSNGRRDSIRLRNASFDHLEPFKGNISTVHMMTNPKPEWRKFLKVLRKESASAVLSELQKMGVLKTQELPDVVCSLIFRTIFQPSTLLKKKLEEIEQGTSTCFPCVLCRKDSV--VSQIPQYISIHARLGTAIEQDAPKRFNLSEHELSLPDIAKCLAYHARETAKLMGLRYG-NYFLATDTEDMKNHLKKELTSCEGCKDDVKIMHSECSLKHVRDLDGNNQDDFDIFMNTFVDLSMLAKGEALLSLPSGFADIAQWMGPINLHKRLTFEQCSM 400
            L+R+L+D Y+ +H     K  E +   + +RTLV+ G   R GLGDRLRG++ AYL AV +NR+LLI WQ PFPL+ VL +   S N+ +++++F    ++  G  D + ++ A+   +  F G    + +   P+P      K +RK         ++K+  L+ +  P+    LIF+ + +PS  L+K + EI    +   P  L ++  +  +     +IS+HARLG  + +   KRF       ++  +A+C+A  A   AK   + +   ++LATDTE  +   K  L   +      K+M+    +KHV+++ G+  DD  +F  TF+DL +++KGEA+L   SGF ++A WMG I          C +
Sbjct:    8 LKRVLIDRYVLWHHSTVSKVREGELDGSSVRTLVFVGNEGRHGLGDRLRGMLFAYLAAVFSNRLLLIHWQDPFPLSTVLVNSVHS-NYTYDASLFPSRTKEEGGEEDKVYVKKATLMEMHLFTGIHRMLVLECEPRPSLDDVFKAMRKFPRLQTSIAMKKILPLRRRPHPNQFFPLIFKALLRPSAALRKMMAEIIDKHNRFAPSRLWKQGPLKRIDTGKPFISVHARLGYGVAEYI-KRFKSQMSGRTMESVAECMAQIAMRLAKRENVTHPPRFYLATDTEQFRLMFKTALMRMDR---QAKVMYGTWVMKHVKEMQGHTTDDLRLFRYTFMDLYIMSKGEAILRSNSGFPNLAVWMGGIPSQMGFNINDCPL 377          
BLAST of Gvermi12660.t1 vs. uniprot
Match: A0A2V3ILT8_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT8_9FLOR)

HSP 1 Score: 85.1 bits (209), Expect = 2.730e-14
Identity = 92/377 (24.40%), Postives = 165/377 (43.77%), Query Frame = 0
Query:   31 RRILLDNYIQFHQKQRLKAEEAKTHYAVIRTLVYHGRSWRGLGDRLRGVIQAYLLAVATNRVLLIDWQYPFPLTQVLNSESESGNFLFNSTVFAETHRKSNGRR--DSIRLRNASFDHLEPFKGNISTVHMMTNPKPEWRKFLKVLRKESASAVLSELQKMGVLKTQELPDV-VCSLIFRTIFQPSTLLKKKLEEIEQGTSTCFPCVLCRKDSVVSQIPQYISIHARLGTAIEQDAPKRFNLSEHELSLPDIAKCLAYHARETAKLMGLRYGNYFLATDT----EDMKNHLKKELTSCEGCK-DDVKIMHSE-CSLKHVRDLDGNNQDDFDIFMNTFVDLSMLAKGEALLSLPSGFADIAQWMGPINLHKRLTFEQC 398
            R+ L++ Y ++H++ R KA          R +V    +  G+GDR   ++ A+++A  +NRVLL+DW  P+PL+   +  S      F      E  +K++ R   D    +     H+      + + H +  P+        ++   S +     L K+    T  + +V V S  F  + +P+  LKK LE+ ++     F                 I +HARLG  + +  P RF  S H  S   +AKC    A  +    G+R   Y+LATDT    +  +N L +E  +    + DD+  +H++ C          NN  +     +T ++L +L+K   +++  S F+ +A ++G + +      +QC
Sbjct:  105 RQHLVNRYAKWHRENRRKAP---------RLVVRFNETNPGVGDRFSTLVSAFIIASFSNRVLLLDWIQPYPLSHFFSPSSAMPGIEFTDADRREEQQKASSRYICDKQCTKKLHLGHV------LGSKHFIIYPQGATTSPQHLVAHFSTTHPRLPLSKVFANLTDVVTNVHVLSSAFNAMLKPAAPLKKLLEKRKRALKQPF-----------------IGVHARLGAGLGETGP-RFG-SGH--SPEQVAKCFVKSALGSGDTHGIR--KYYLATDTVPFRDVFENVLLRERPNASLIRFDDIMPVHTKGCK---------NNASEC---ASTMMELIVLSKSSYIVASKSSFSRVAGYIGNVTVESLGVIKQC 431          
BLAST of Gvermi12660.t1 vs. uniprot
Match: A0A0L0FCL9_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCL9_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 4.950e-12
Identity = 89/377 (23.61%), Postives = 155/377 (41.11%), Query Frame = 0
Query:   11 IRSQYTPLQSHLEENGSLKLRRILLDNYIQFHQKQRLKAEEAKTHYAVIRTLVYHGRSWRGLGDRLRGVIQAYLLAVATNRVLLIDWQYPFPLTQVLNSESESGNFLFNSTVFAETHRKSNGRRDSIRLRNASFDHLEPFKGNISTVHMMTNPKPEWRKFLKVLRKESASAVLSELQKMGVLKTQELPDVVCSLIFRTIF--QPSTLLKKKLEEIEQGTSTCFPCVLCRKDSVVSQIPQYISIHARLGTAIEQDAPKRFNLSEHELSL---PDIAKCLAYHARETAKLMGLRYGNY-FLATDTEDMKNHLKKELTSCEGCKDDVKIMHSECSLKHVRDLDGNNQDDFDIFMNTFVDLSMLAKGEALLSLPSGFADIA 381
            ++S+ T  +     +  L LR   L  YI+ H  ++++  +  T Y ++ T         G+GDRLRG++  ++L+++TNRVL+IDW YPF L + L            +    ET   +N  +    L     ++ E  + + S   ++       R+ L  L          +L + G    Q +P ++CS I R++F   P T+     +    G     P               +++IHAR G         +F      L L   P IA+C A       +  G+   N  FLA D+ + K   +++L   +         H +   K   + D    D  +    T+ +  +L+K E ++S  SGF++ A
Sbjct:   53 VKSETTESEFWPSLDDGLPLR---LMEYIKEHG-EKVRKPDMHTEY-IVYTCTEQNERCGGIGDRLRGIVSLFMLSISTNRVLVIDWSYPFALEETLIPGMVDWLAPLRTVQLYET---ANPHKTVSLLSMGEANYTEWTRVSQSDAKIVRITTNNIRRGLSALSAAKNMISQMDLYRPG----QRIPQLLCSWILRSLFVPNPDTIRVANEQLALIGIDPDRP---------------FVAIHARFGHTNNDKGASQFKTDPARLGLEDIPKIARC-ASKINSQMRFKGIAVQNATFLAADSNEGKYIFREQLQDVKYFS--AHAFHIDKVRKDRGEYDAAEADMLNQL--TWAEFLILSKSECVVSTRSGFSEWA 397          
BLAST of Gvermi12660.t1 vs. uniprot
Match: A0A0L0FE47_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FE47_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 1.150e-8
Identity = 97/371 (26.15%), Postives = 163/371 (43.94%), Query Frame = 0
Query:   37 NYIQFHQKQRLKAEEAKTHYAVIRTLVYHGRSW-RGLGDRLRGVIQAYLLAVATNRVLLIDWQYPFPLTQVLNSES-------------ESGNFLFNSTVFAETHRKSNGRR--DSIRLRNASFDHLEPFKGNISTVHMMTNPKPEWRKFLKVLRKESASAVLSELQKMGVLKTQELPDVVCSLIFRTIFQPS-TLLKKKLEEIEQ-GTSTCFPCVLCRKDSVVSQIPQYISIHARLG-TAIEQDA-----PKRFNLSEHELSLPDIAKCLAYHARETAKLMGLRYGNYFLATDTEDMK---NHLKKELT--SCEGCKDDVKIMHSECSLKHVRDLDGNNQDDFDIFMNTFVDLSMLAKGEALLSLPSGFA 378
            +Y +FH +Q ++  +  T Y V      H RS+  G+GDRL G++  ++LAV+TNRVL+IDW  PFPL + LN                E  N     TVF E  R+S      +S+  R+     ++  K + S+ +   +    W+          A+A +   Q  G      +P ++C+ I R++F P+ T+L+   +++   G     P               YI+IH R G TA +  +     P R  +     ++PD ++C    + + +        + FLA D+ + K   N   +++   S      D  IM     L+     +GN  +       T+V+  +L+K E L+S PSGF+
Sbjct:   64 DYSKFHNEQ-VQNPQQNTKYLVYTCT--HQRSFCGGIGDRLSGIVSLFMLAVSTNRVLVIDWNTPFPLYESLNPNIIDWLTPLKTVILYEIANP--EQTVFIEGVRRSINSTYWESVLQRDIGVVRIKSNKIDFSSQNFTHSAA--WQ----------AAAGMKAYQ-FG----DGIPPLLCTWILRSLFTPNPTILQIAKDQLSLIGLDMGQP---------------YIAIHTRFGHTANDTGSGQFVDPVRLKVD----TIPDFSQCAVTMSEQFSHRGIHLQTSTFLAADSNEGKLAFNAYARDVKYFSAHAFHVDRSIM-----LETYDSAEGNLLNQL-----TWVEFLVLSKSECLVSSPSGFS 383          
The following BLAST results are available for this feature:
BLAST of Gvermi12660.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J6I6_9FLOR1.340e-5231.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILT8_9FLOR2.730e-1424.40Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A0L0FCL9_9EUKA4.950e-1223.61Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A0L0FE47_9EUKA1.150e-826.15Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11340coord: 58..105
e-value: 1.9E-5
score: 26.4
NoneNo IPR availableGENE3D3.40.50.11350coord: 240..412
e-value: 8.0E-7
score: 30.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:132678..133949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12660.t1Gvermi12660.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 132678..133949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12660.t1 ID=Gvermi12660.t1|Name=Gvermi12660.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=424bp
MSIHQYLKPNIRSQYTPLQSHLEENGSLKLRRILLDNYIQFHQKQRLKAE
EAKTHYAVIRTLVYHGRSWRGLGDRLRGVIQAYLLAVATNRVLLIDWQYP
FPLTQVLNSESESGNFLFNSTVFAETHRKSNGRRDSIRLRNASFDHLEPF
KGNISTVHMMTNPKPEWRKFLKVLRKESASAVLSELQKMGVLKTQELPDV
VCSLIFRTIFQPSTLLKKKLEEIEQGTSTCFPCVLCRKDSVVSQIPQYIS
IHARLGTAIEQDAPKRFNLSEHELSLPDIAKCLAYHARETAKLMGLRYGN
YFLATDTEDMKNHLKKELTSCEGCKDDVKIMHSECSLKHVRDLDGNNQDD
FDIFMNTFVDLSMLAKGEALLSLPSGFADIAQWMGPINLHKRLTFEQCSM
EKKMRESRLDQIEASRDRTEVFL*
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