Gvermi12762.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12762.t1
Unique NameGvermi12762.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length218
Homology
BLAST of Gvermi12762.t1 vs. uniprot
Match: A0A2V3ILF4_9FLOR (Protein disulfide-isomerase tigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF4_9FLOR)

HSP 1 Score: 240 bits (613), Expect = 1.920e-77
Identity = 121/182 (66.48%), Postives = 147/182 (80.77%), Query Frame = 0
Query:   26 VLELSLLSLDHVIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKFVQSNGTASGEKLSAVNGPLSAYWRLVHLLFRLVNFLQVEFEQYRLNGGNIPLLIVAIVTGVLSAFMVAIYLITLPPKPLSSQNR 207
            VLELS L LDH++ +++KPLLLQFYSP+C HCVRF PAYEQ+A  L +DA VARVDG+ HRALRLRF VMAFPSFFLIHAGSVFEFVG+ SS+ L+ FV+S+G  SG+KLS++ GPLS YW+LVHLLFR V FLQ     Y+ NGGN+  L++A+V GVLSAF+V I+LIT PPKP   + R
Sbjct:   27 VLELSHLQLDHIVSTATKPLLLQFYSPTCIHCVRFAPAYEQLASDLTSDAFVARVDGINHRALRLRFHVMAFPSFFLIHAGSVFEFVGSASSEQLLNFVRSHGAISGKKLSSLAGPLSPYWKLVHLLFRFVYFLQRHVHMYQRNGGNMAFLVLAVVIGVLSAFVVIIHLITRPPKPYPQRTR 208          
BLAST of Gvermi12762.t1 vs. uniprot
Match: A0A7S2KNV6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KNV6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.810e-19
Identity = 60/167 (35.93%), Postives = 92/167 (55.09%), Query Frame = 0
Query:   23 AADVLELSLLSLDHVIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDAN------VARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKFVQSNGTASGEKLSAVN---GPLSAYWRLVHLLFRLVNFLQVEFEQYRLNGGNIPLLIVAI 180
            A  V++L+  + D  + S     L++FY+P C HC RF PAYE VAK+LH++ N      VA++DG A RAL  RF V  FP+FFL++  +V E+ G  S ++L+KF     T + E++ A+    GP     +L   L R   ++   +E      G  PL+ +A+
Sbjct:   67 AEGVIQLTAKNFDKSL-SDGNAWLIEFYAPWCSHCTRFAPAYEAVAKQLHSEKNNKHKVKVAKIDGAAERALSSRFSVKGFPTFFLVNGWTVREYAGNRSQENLVKFA----TETYEEVEAMPFLFGPFGPMGQLRSFLMRSGAWVVGLYENLTETRGLKPLIAMAV 228          
BLAST of Gvermi12762.t1 vs. uniprot
Match: A0A022Q0D4_ERYGU (Protein disulfide-isomerase n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q0D4_ERYGU)

HSP 1 Score: 67.0 bits (162), Expect = 2.160e-9
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0
Query:   33 SLDHVIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDANV--ARVDGVAHRALRLRFRVMAFPS-FFLIHAGSVFEFVGAHSSDDLIKFVQSNGTASGEKLS 136
            SL  V+ +S K +LL+FY+P C HC +  P  ++VA    +D NV  A+ D  A+   +  F V  FP+ +F    GS+ ++ G  + +D+IKF+++N   + E  S
Sbjct:  380 SLQDVVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAISFESDPNVVIAKFDATANDVPKGDFEVQGFPTIYFRSSTGSLSQYEGDRTKEDIIKFIETNRDKTAEATS 486          
BLAST of Gvermi12762.t1 vs. uniprot
Match: U6GUU6_EIMAC (Thioredoxin, putative n=1 Tax=Eimeria acervulina TaxID=5801 RepID=U6GUU6_EIMAC)

HSP 1 Score: 64.7 bits (156), Expect = 5.020e-9
Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   37 VIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKF 123
            V  S+S    ++FY+P C HC +  PA+E++AK+L    NVA +D  A+     RF +  FP+   +  G ++ + G+ + DDL  F
Sbjct:   73 VTGSTSGDWFVKFYAPWCGHCRKMAPAWEELAKKLKGQINVAHLDATANPQTARRFSIRGFPTLLFLKDGQMYHYKGSRTVDDLYAF 159          
BLAST of Gvermi12762.t1 vs. uniprot
Match: U6MGY4_EIMMA (Thioredoxin, putative n=1 Tax=Eimeria maxima TaxID=5804 RepID=U6MGY4_EIMMA)

HSP 1 Score: 64.3 bits (155), Expect = 7.430e-9
Identity = 28/87 (32.18%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   37 VIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKF 123
            V  S+S    ++FY+P C HC +  PA+E++A++L    NVA +D   ++    RF +  FP+   +  G ++++ G  + DD+ KF
Sbjct:   80 VTGSTSGDWFVKFYTPWCGHCRKLAPAWEELARKLKGQINVAHLDATTNQRTASRFNIRGFPTLLYLKDGQMYQYKGNRTVDDMYKF 166          
BLAST of Gvermi12762.t1 vs. uniprot
Match: A0A485LG90_9STRA (Aste57867_20959 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG90_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.680e-9
Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 0
Query:   47 LQFYSPSCHHCVRFQPAYEQVAKRLHTDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKFVQSNGTA 130
            + FYSPSC +     PA++ VAK++     + +VDG AHR L+LRFRV   P+F   H G ++ +    ++  + +F+ S   A
Sbjct:   48 VMFYSPSCPYYQDVAPAFDAVAKQVEGRVRLGKVDGKAHRELKLRFRVTRSPTFLFFHQGRMYAYKDERTTAAMAEFITSGFAA 131          
BLAST of Gvermi12762.t1 vs. uniprot
Match: A0A443S748_9ACAR (Disulfide-isomerase TMX3-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443S748_9ACAR)

HSP 1 Score: 63.2 bits (152), Expect = 3.700e-8
Identity = 39/126 (30.95%), Postives = 67/126 (53.17%), Query Frame = 0
Query:   26 VLELSLLSLDHVIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTD---ANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKFVQSNGTASGEKLSAVNGPLSAYWRL 148
            VLELS   L+ V K+S    L++FY+P CHHC + +PA+ QVA+++H +     VAR+D     ++   F +  FP+   I + +V E+ G  + +++  F +     SG ++  +      Y  L
Sbjct:    8 VLELSDKFLE-VYKNSDTRWLVKFYAPWCHHCKQLEPAFAQVAQKVHNEDIGVLVARLDCTRFTSVATYFNIRGFPTILFISSSNVVEYNGDRTQEEITDFARR---LSGPRIRVIEECKDLYTHL 129          
BLAST of Gvermi12762.t1 vs. uniprot
Match: A0A078F495_BRANA (Protein disulfide-isomerase n=9 Tax=Brassica TaxID=3705 RepID=A0A078F495_BRANA)

HSP 1 Score: 63.2 bits (152), Expect = 4.400e-8
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 0
Query:   33 SLDHVIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDANV--ARVDGVAHRALRLRFRVMAFPSFFLIHA-GSVFEFVGAHSSDDLIKFVQSNGTASGE 133
            SLD ++ SS K +LL+FY+P C HC    P  ++VA    +D +V  A+ D  A+      F V  FP+ +L  A G+V  + G  + +D+I F+  N   +GE
Sbjct:  380 SLDEMVFSSGKNVLLEFYAPWCGHCQNLVPILDEVAVSYQSDPSVVIAKFDATANDFPHDTFDVKGFPTIYLRSANGNVVLYKGDRTKEDIISFIDKNKDTAGE 483          
BLAST of Gvermi12762.t1 vs. uniprot
Match: U6GP71_9EIME (Thioredoxin, putative n=1 Tax=Eimeria praecox TaxID=51316 RepID=U6GP71_9EIME)

HSP 1 Score: 61.6 bits (148), Expect = 6.160e-8
Identity = 28/87 (32.18%), Postives = 48/87 (55.17%), Query Frame = 0
Query:   37 VIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKF 123
            V  S+S    ++FY+P C HC +  PA+E++AK+L    NVA ++  A+     RF +  +P+      G ++ + G+ + DDL  F
Sbjct:   70 VTGSTSGDWFVKFYAPWCGHCRKLAPAWEELAKKLKGQINVAHLEATANPQTARRFNIRGYPTLLFFKNGKMYHYKGSRTVDDLYAF 156          
BLAST of Gvermi12762.t1 vs. uniprot
Match: U6JVK8_9EIME (Thioredoxin, putative n=1 Tax=Eimeria mitis TaxID=44415 RepID=U6JVK8_9EIME)

HSP 1 Score: 61.6 bits (148), Expect = 6.410e-8
Identity = 28/87 (32.18%), Postives = 48/87 (55.17%), Query Frame = 0
Query:   37 VIKSSSKPLLLQFYSPSCHHCVRFQPAYEQVAKRLHTDANVARVDGVAHRALRLRFRVMAFPSFFLIHAGSVFEFVGAHSSDDLIKF 123
            V  S++    ++FY+P C HC +  PA+E++AK+L    NVA +D   +     RF +  FP+      G ++++ G+ + DDL  F
Sbjct:   74 VTGSTTGDWFVKFYAPWCGHCRKMAPAWEELAKKLKGQINVAHLDATTNPQTARRFSIRGFPTLLYFKNGQMYQYKGSRTVDDLYAF 160          
The following BLAST results are available for this feature:
BLAST of Gvermi12762.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2V3ILF4_9FLOR1.920e-7766.48Protein disulfide-isomerase tigA n=1 Tax=Gracilari... [more]
A0A7S2KNV6_9STRA1.810e-1935.93Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A022Q0D4_ERYGU2.160e-934.58Protein disulfide-isomerase n=1 Tax=Erythranthe gu... [more]
U6GUU6_EIMAC5.020e-934.48Thioredoxin, putative n=1 Tax=Eimeria acervulina T... [more]
U6MGY4_EIMMA7.430e-932.18Thioredoxin, putative n=1 Tax=Eimeria maxima TaxID... [more]
A0A485LG90_9STRA7.680e-935.71Aste57867_20959 protein n=1 Tax=Aphanomyces stella... [more]
A0A443S748_9ACAR3.700e-830.95Disulfide-isomerase TMX3-like protein (Fragment) n... [more]
A0A078F495_BRANA4.400e-835.58Protein disulfide-isomerase n=9 Tax=Brassica TaxID... [more]
U6GP71_9EIME6.160e-832.18Thioredoxin, putative n=1 Tax=Eimeria praecox TaxI... [more]
U6JVK8_9EIME6.410e-832.18Thioredoxin, putative n=1 Tax=Eimeria mitis TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 33..125
e-value: 1.5E-15
score: 57.1
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 12..129
score: 10.648645
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 17..137
e-value: 5.5E-23
score: 83.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..217
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..161
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..195
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 28..124
e-value: 1.10202E-22
score: 86.1253
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
IPR044569Protein disulfide-isomerase A6-likePANTHERPTHR45815PROTEIN DISULFIDE-ISOMERASE A6coord: 6..127
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 22..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1411435..1412172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12762.t1Gvermi12762.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1411435..1412172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12762.t1 ID=Gvermi12762.t1|Name=Gvermi12762.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=218bp
MARYALLPAAVLLLCAAAAHHAAADVLELSLLSLDHVIKSSSKPLLLQFY
SPSCHHCVRFQPAYEQVAKRLHTDANVARVDGVAHRALRLRFRVMAFPSF
FLIHAGSVFEFVGAHSSDDLIKFVQSNGTASGEKLSAVNGPLSAYWRLVH
LLFRLVNFLQVEFEQYRLNGGNIPLLIVAIVTGVLSAFMVAIYLITLPPK
PLSSQNRWRTPAREHND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR044569PDIA6-like
IPR036249Thioredoxin-like_sf