Gvermi12939.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12939.t1
Unique NameGvermi12939.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length292
Homology
BLAST of Gvermi12939.t1 vs. uniprot
Match: A0A2V3IG38_9FLOR (L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG38_9FLOR)

HSP 1 Score: 427 bits (1097), Expect = 1.940e-148
Identity = 214/300 (71.33%), Postives = 250/300 (83.33%), Query Frame = 0
Query:    1 MGIRLSVLVLLSATFVFHVA--ESGGSN-------CFAAHSEIRRMLEKGMKTNPDLIPSFSRAAFHDCITATKSKPKSGCNGSLRLNNEITNMNNDGLQPPLDFLRKILPTIRNKKCASFADGLQLGAEVAMKVSKGPNVIGRLVKSLAPRKDVDEPDTVDGELPDKDDSFENLKEFFARKGFNVREMVVANVGGHALGAFVDDADNQDKPFTTTETEFNIDYAVNLVQRIDTGVNLEGFHTLNSDLELLENPESVYWLKYYAGYFGFGYNEALGRMRLRHDYGRFLIKLAQLRGSTLP 291
            MGI+  +L LL + F+ HVA  +SG +        CF++H +IR +++KGMK +PDLIP+FSRAAFHDCITAT SKP SGCNGSLRL  EITNMNND LQPPLDFLR+ LPTI +KKCASFADG+QLGAEVAM++S GP V+G+LV S APR DVD+PDTV+GELPD+DD F  L +F+ARKGFN+REMVV+NVGGHALGAF DD DNQ+KPFTTTET FNIDYAVNLVQRIDTG NLEGFHTLNSDLELL N ESV+WLKYYAG+ G GY  +LG++RL  DYG+FLIKLA L+GS LP
Sbjct:    1 MGIQRYLLSLLCSVFLVHVATAKSGFTRYFFSTPMCFSSHQKIREVIKKGMKDDPDLIPAFSRAAFHDCITATSSKPNSGCNGSLRLEEEITNMNNDRLQPPLDFLRQHLPTIAHKKCASFADGIQLGAEVAMQISGGPKVLGKLVNSAAPRVDVDDPDTVEGELPDEDDPFPKLLDFYARKGFNLREMVVSNVGGHALGAFEDDEDNQEKPFTTTETSFNIDYAVNLVQRIDTGKNLEGFHTLNSDLELLNNTESVFWLKYYAGHTGVGYVPSLGKLRLLTDYGKFLIKLASLKGSNLP 300          
BLAST of Gvermi12939.t1 vs. uniprot
Match: A0A2V3ISI5_9FLOR (L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI5_9FLOR)

HSP 1 Score: 201 bits (512), Expect = 1.850e-61
Identity = 112/196 (57.14%), Postives = 132/196 (67.35%), Query Frame = 0
Query:   34 IRRMLEKGMKTNPDLIPSFSRAAFHDCITATKSKPKSGCNGSLRLNNEITNMNNDGLQPPLDFLRKILPTIRNKKCASFADGLQLGAEVAMKVSKGPNVIGRLVKSLAPRKDVDEPDTVDGELPDKDDSFENLKEFFARKGFNVREMVVANVGGHALGAFVDDADNQDKPFTTTETEFNIDYAVNLVQRIDTGVNL 229
            IR ++E+G+K +P+ I SFSRAA HDCITAT SKP SGCN SLRL+ EI NM +DGL+ P++FLR   P + N+  A FADG QLGAEVAM VS GPNVIG+LV S  PR   D  DTVDGELP                   +     ++VG HALGAF DD DNQ KPFTT ET ++IDY VNLVQRIDT  N+
Sbjct:    2 IRIIIEEGVKGDPNPISSFSRAAIHDCITATTSKPHSGCNASLRLDEEINNMESDGLESPVNFLRLHFPVMANQLYALFADGPQLGAEVAMNVSSGPNVIGKLVSSAKPRVVDDGRDTVDGELPS-----------------TLERWQFSSVGIHALGAFEDDNDNQKKPFTTNETSYSIDYPVNLVQRIDTKKNM 180          
BLAST of Gvermi12939.t1 vs. uniprot
Match: A0A7S1NS16_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NS16_9EUGL)

HSP 1 Score: 63.2 bits (152), Expect = 1.370e-7
Identity = 62/219 (28.31%), Postives = 100/219 (45.66%), Query Frame = 0
Query:   46 PDLIPSFSRAAFHDCITATKSKPKSGCNGSLRLNNEITNMNNDGLQPPLDFLRKILPTIRNKKCAS--FADGLQLGAEVAMKVSKGPNVIGRLVKSLAPRKDVDEPDTVDGELPDKDDSFENLKEFFARKGFNVREMVVANVGGHALGAFVDDADNQDKPFTTTETEFNIDYAVNLVQRIDTGVNLEGFHT-------LNSDLELLENPESVYWLKYYA 255
            P   P+  R AFHD  T   +    G NGS++   E+    + GL+  L  + +    +++   AS  F D + L A   ++ + GP +   L      RKD D PD  +G +P++  +   L+E FA+ GFN +E+V  + G H +G          K F     +F+  Y   L+++     +L G          L SD  L ++PE + W+K YA
Sbjct:  237 PGKYPAVLRLAFHDAGTYDAATGTGGANGSVQF--ELDRPESRGLKRGLRPVMEAQAKLQDGPAASVSFTDLIYLAAAYVVEAAGGPKIDISL-----GRKDADGPDP-EGRMPEETLTGRQLREHFAKGGFNTQELVALS-GAHTIG---------QKGFGNP-VQFDNTYYRTLIEQPWNDKSLTGEKKEMAQMIGLPSDKALPQDPECLEWIKVYA 436          
BLAST of Gvermi12939.t1 vs. uniprot
Match: A3LQQ1_PICST (Peroxidase n=1 Tax=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) TaxID=322104 RepID=A3LQQ1_PICST)

HSP 1 Score: 60.1 bits (144), Expect = 7.980e-7
Identity = 66/225 (29.33%), Postives = 99/225 (44.00%), Query Frame = 0
Query:   48 LIPSFSRAAFHDCITATKSKPKSGCNGS-LRLNNEITNMNNDGLQPPLDFLRKILPTIRNK-KCASFADGLQLGAEVAMKVSKGPNV---IGRLVKSLAPRKDVDEPDTVDGELPDKDDSFENLKEFFARKGFNVREMVVANVGGHALGAFVDDADNQDKPFTTTETEFNIDYAVNLVQRI-------DTGVNL-----EGFHTLNSDLELLENPESVYWLKYYA 255
            L P   R A+H C T   S    G NG+ +R   EIT+  N GL    D  R  L  ++ K    S++D   L  +VA++   GP +    GR    +  R D   P    G LP  D    +++  F R GF  +E V+  +G H+LG         +  +TT   +F+ D+   LV          +TG        +    LN+D+ELL +PE + W+  Y+
Sbjct:   28 LAPIILRLAWHCCATYDISTGNGGSNGATMRFVPEITDEGNTGL----DISRAALEPVKQKFPRISYSDLWTLAGKVAIESMGGPEIPWTAGR----VDCRDDRHVPSN--GHLPFADKDAGHIRSTFQRMGFGDQEAVIL-LGAHSLGRCHKRFSGWEGKWTTNPIQFSNDFYKVLVNENWQKGTVPETGREQYFNEDKSLMMLNTDMELLRDPEYLRWVIVYS 241          
The following BLAST results are available for this feature:
BLAST of Gvermi12939.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IG38_9FLOR1.940e-14871.33L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Grac... [more]
A0A2V3ISI5_9FLOR1.850e-6157.14L-ascorbate peroxidase 5, peroxisomal n=1 Tax=Grac... [more]
A0A7S1NS16_9EUGL1.370e-728.31Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A3LQQ1_PICST7.980e-729.33Peroxidase n=1 Tax=Scheffersomyces stipitis (strai... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002016Haem peroxidasePRINTSPR00458PEROXIDASEcoord: 110..127
score: 30.21
coord: 180..195
score: 32.24
coord: 204..219
score: 28.29
coord: 49..63
score: 36.73
IPR002016Haem peroxidasePFAMPF00141peroxidasecoord: 35..255
e-value: 2.1E-26
score: 93.0
IPR002016Haem peroxidasePROSITEPS50873PEROXIDASE_4coord: 10..191
score: 14.203794
NoneNo IPR availableGENE3D1.10.520.10coord: 17..161
e-value: 2.4E-20
score: 74.8
NoneNo IPR availableGENE3D1.10.420.10Peroxidase, domain 2coord: 162..264
e-value: 1.2E-13
score: 53.5
NoneNo IPR availablePANTHERPTHR31356:SF34THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTICcoord: 37..256
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableCDDcd00314plant_peroxidase_likecoord: 32..269
e-value: 2.65057E-33
score: 120.721
IPR044831Heme-binding peroxidase Ccp1-likePANTHERPTHR31356THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATEDcoord: 37..256
IPR010255Haem peroxidase superfamilySUPERFAMILY48113Heme-dependent peroxidasescoord: 25..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2240349..2241224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12939.t1Gvermi12939.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2240349..2241224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12939.t1 ID=Gvermi12939.t1|Name=Gvermi12939.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=292bp
MGIRLSVLVLLSATFVFHVAESGGSNCFAAHSEIRRMLEKGMKTNPDLIP
SFSRAAFHDCITATKSKPKSGCNGSLRLNNEITNMNNDGLQPPLDFLRKI
LPTIRNKKCASFADGLQLGAEVAMKVSKGPNVIGRLVKSLAPRKDVDEPD
TVDGELPDKDDSFENLKEFFARKGFNVREMVVANVGGHALGAFVDDADNQ
DKPFTTTETEFNIDYAVNLVQRIDTGVNLEGFHTLNSDLELLENPESVYW
LKYYAGYFGFGYNEALGRMRLRHDYGRFLIKLAQLRGSTLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002016Haem_peroxidase
IPR044831Ccp1-like
IPR010255Haem_peroxidase_sf