Gvermi12783.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12783.t1
Unique NameGvermi12783.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length307
Homology
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BLAST of Gvermi12783.t1 vs. uniprot
Match: A0A2V3IEW3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW3_9FLOR)

HSP 1 Score: 172 bits (435), Expect = 1.000e-48
Identity = 115/220 (52.27%), Postives = 146/220 (66.36%), Query Frame = 0 
Query:   70 MPPETRKKISDALKGRRKSAEHRESLRRRFEGPQNPMYGRKRSPESRAKISRAMSEKAKQRKSEQLAKPP------------VQEEALDQLREKAKGSRLITSVTNPPESRSRNRSAYDELEAAHIDRVLNRVARLEEPPDSVVKRMRSNREKRQTRANERRSAK------SSQPSKGNVRVSRVSDTQSRANNLASLSKT--NSKPRTKCSLCKGTGLM 269
            MP ETR+KIS ALKGRRKS EHRESLRRRFEG QNPMYGRK S ESRAKISRAM+ K KQ+K + + KP             + E+ LDQLREKA  S+LITS T PP  R  NR  +D+LEAAH+D++L RVA L+EPP++VV+ +++NR++R+    ERR+A       S  PS G   +S  SD ++    L    KT   S+   +C++C GTGLM
Sbjct:    1 MPAETRRKISAALKGRRKSPEHRESLRRRFEGSQNPMYGRKLSAESRAKISRAMAAKGKQKKQDNVDKPEQANSPAKRKNKQLMEQTLDQLREKAVQSKLITSATQPPPKRKPNRILHDDLEAAHLDKILKRVASLDEPPEAVVRTLQNNRKRREKNTLERRAANNRGRAASGPPSTG---LSEKSDKKA----LPEPDKTVDASERNCQCTVCNGTGLM 213
The following BLAST results are available for this feature:
BLAST of Gvermi12783.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEW3_9FLOR1.000e-4852.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003611Nuclease associated modular domain 3SMARTSM00496seet_6coord: 107..123
e-value: 0.47
score: 19.5
coord: 66..82
e-value: 99.0
score: 8.1
IPR003611Nuclease associated modular domain 3PFAMPF07460NUMOD3coord: 84..120
e-value: 1.1E-7
score: 31.6
coord: 72..84
e-value: 0.15
score: 12.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..251
NoneNo IPR availableSUPERFAMILY64496DNA-binding domain of intron-encoded endonucleasescoord: 72..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1509134..1510054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12783.t1Gvermi12783.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1509134..1510054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12783.t1 ID=Gvermi12783.t1|Name=Gvermi12783.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=307bp
MQATFVTLSNPLTQPDGRLAICKQRPKVGFCPLVWTVTACQKKVRKAAQN
GPPADSEESDTNAPRKRLPMPPETRKKISDALKGRRKSAEHRESLRRRFE
GPQNPMYGRKRSPESRAKISRAMSEKAKQRKSEQLAKPPVQEEALDQLRE
KAKGSRLITSVTNPPESRSRNRSAYDELEAAHIDRVLNRVARLEEPPDSV
VKRMRSNREKRQTRANERRSAKSSQPSKGNVRVSRVSDTQSRANNLASLS
KTNSKPRTKCSLCKGTGLMSCPRCITGGSPNSRCESCFGAGGVFCETCNG
VGTVIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003611NUMOD3