Gvermi12912.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12912.t1
Unique NameGvermi12912.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length370
Homology
BLAST of Gvermi12912.t1 vs. uniprot
Match: A0A2V3J1I4_9FLOR (IST1-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1I4_9FLOR)

HSP 1 Score: 464 bits (1194), Expect = 9.590e-161
Identity = 261/385 (67.79%), Postives = 291/385 (75.58%), Query Frame = 0
Query:    1 MKAMKGALARKFARAN--EQPAAPGPLSAPVAPATNASPVWDATRFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLNVPELQTVCSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWIPPPEEIHLDQGIASRASDPGYYRPERLPQATNIPGMSMPPAPSAPPSNIPGYTPYDNSPYGGAPSAXXXXXXPSAPP-------------FDPSAGAPGTLYPYPDHNAPGQPPSYIPPXPPFSHTSSS-RDDRGPGDGGPSLPTPPSNAPFLNDDSLEARFRDLKKK 369
            MKA+KG  ARK A     +QP+AP     PV PATN SP WDATRFRV LKMA NRI+IQRGKKDNEVQA RIVIADHLRSH+E LARIQA+RILRE +QITAFDVI+T+IQLLQTQ+NVL VQ +FDAAPQDLKENVASVVFAS RLN+PEL TVCSMLRDHFGP+VIDPLR LSGP+IKYINKTLAISLEGGTPDGY VL+ELSSIATEH +NWIPPPE+IHLDQ   SR SDPGYYRP+R PQ  NIPGM+   AP  P        P  N PYGG PSA      P+A               FDPSAGA GTLYP+P+ +A G   +YIPPX      S S R+DRGPG G  ++P PPS   FL+DD+L+ARFRDLKKK
Sbjct:    1 MKAIKGRFARKLASRTHQQQPSAPA-TDIPVKPATNPSPAWDATRFRVQLKMARNRIDIQRGKKDNEVQAIRIVIADHLRSHKETLARIQADRILRERTQITAFDVIDTYIQLLQTQNNVLSVQHDFDAAPQDLKENVASVVFASFRLNIPELHTVCSMLRDHFGPAVIDPLRNLSGPHIKYINKTLAISLEGGTPDGYLVLEELSSIATEHNVNWIPPPEDIHLDQASGSRPSDPGYYRPQRFPQPANIPGMTNSSAP--PXXXXXXXDPNGNMPYGGVPSAPPPPGMPTASXXXXXXXXXXXXXXFDPSAGAQGTLYPFPNSHAQGH--NYIPPXXXXXXXSQSGRNDRGPGGGDGAVPNPPS---FLDDDALQARFRDLKKK 377          
BLAST of Gvermi12912.t1 vs. uniprot
Match: A0A834GGJ9_RHOSS (Uncharacterized protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834GGJ9_RHOSS)

HSP 1 Score: 91.3 bits (225), Expect = 1.120e-16
Identity = 66/209 (31.58%), Postives = 107/209 (51.20%), Query Frame = 0
Query:   47 LLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLN-VPELQTVCSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWIPPPEEIHLDQGIASRASDPGYYRPERLPQATNIPGMSMP 254
            + KMA  RI++ R K++  V+  R  IA  L+S ++  ARI+ E ++RE + + A +V+E F +L+  +  ++  QR     P+DLKE +AS++FA+ R + +PEL ++  +    +G   +     L  PN   +N+ L   L   TP G   L  +  IA EHQI W     EI L +        P Y+       AT++P   +P
Sbjct:    1 MTKMAVARIKLLRNKREAVVKQMRRDIALLLQSGQDATARIRVEHVIREQNVMAANEVLELFCELIVARLTIIAKQRQ---CPEDLKEGIASLIFAAPRCSDIPELLSIRDIFEKKYGKDFVSAATDLR-PNAG-VNRMLIEKLSVRTPSGQVKLKVMKEIAKEHQIEWDTTESEIELLKPPEELIEGPNYFV-----SATSLPIKPLP 199          
BLAST of Gvermi12912.t1 vs. uniprot
Match: D8RE34_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RE34_SELML)

HSP 1 Score: 86.7 bits (213), Expect = 1.980e-16
Identity = 61/183 (33.33%), Postives = 100/183 (54.64%), Query Frame = 0
Query:   45 RVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRL-NVPELQTVCSMLRDHFGPSVIDP---LRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWIPPPEEIHL 223
            + LLK+A +RI++ R K+D +V+  R  IA  L + +EP ARI+ E ++RE + + A+D++E F +L+  +  V+  Q+     P DLKE++AS++FA++R  ++PEL  + S     +G   +     LR   G + + I K     +    P G   L  L  IATE+ + W P   E  L
Sbjct:    1 KTLLKLATSRIKLLRNKRDIQVKQMRRDIAQMLGTGQEPSARIRVEHVIREQNIMDAYDMVELFAELIVVRLPVIDGQKT---CPADLKESIASLIFAAARCADLPELADIKSCFALKYGKEFVAAAAELRPTCGVSRRIIEK-----MSVRAPSGETKLKVLKEIATEYGVVWDPRDTEADL 175          
BLAST of Gvermi12912.t1 vs. uniprot
Match: A0A443NHY7_9MAGN (Filaggrin isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NHY7_9MAGN)

HSP 1 Score: 91.3 bits (225), Expect = 3.120e-16
Identity = 60/189 (31.75%), Postives = 101/189 (53.44%), Query Frame = 0
Query:   39 WDATRFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRL-NVPELQTVCSMLRDHFGPSVIDP---LRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWIPPPEEIHL 223
            +  T+ +  LK+A  RI++ + K++ +++  +  +A  L S +E  ARI+ E ++RE   + A+D++E + +L+  + +++  Q+N    P DLKE +AS++FAS R  ++PELQ V       +G   +     LR   G N   I K     L   TPDG   +  L++IA EH + W P   E  L
Sbjct:    6 FKTTKCKTSLKLAGARIKLLKNKREAQLKQMKRDLAQLLASGQEKTARIRVEHVVREEKTMAAYDIVEVYCELIVARLHIIESQKN---CPIDLKEPIASLIFASPRCADIPELQDVRKQFTKKYGKEFVASALELRPDCGVNHMIIEK-----LSAKTPDGDTKIKILTAIAQEHNVKWDPAALEEQL 186          
BLAST of Gvermi12912.t1 vs. uniprot
Match: A0A6J1KQI2_CUCMA (IST1-like protein n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KQI2_CUCMA)

HSP 1 Score: 90.1 bits (222), Expect = 3.460e-16
Identity = 62/193 (32.12%), Postives = 104/193 (53.89%), Query Frame = 0
Query:   39 WDATRFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLN-VPELQTVCSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINW---------IPPPEEI 221
            ++ ++ +   KMA  RI++ R K++  V+  R  IA  L+S ++  ARI+ E ++RE + + A ++IE F +L+ ++ +++  QR     P DLKE VAS++FA+ R + +PEL  + ++    +G   +     L  PN   +N+ L   L   TP G   L  +  IA EHQI W         + PPEE+
Sbjct:   71 FNTSKCKTAAKMAVARIKLLRNKREAVVKQMRRDIALLLQSGQDATARIRVEHVIREQNVLAANEIIELFCELIVSRLSIIAKQRE---CPADLKEGVASLIFATPRCSEIPELSALRNVFEKKYGKDFVSAATDLR-PNCG-VNRLLIDKLSVRTPTGQVKLTIMKEIAKEHQIEWDTTESEKELLKPPEEL 258          
BLAST of Gvermi12912.t1 vs. uniprot
Match: UPI000D1CFD6E (IST1 homolog n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CFD6E)

HSP 1 Score: 89.0 bits (219), Expect = 5.330e-16
Identity = 61/189 (32.28%), Postives = 104/189 (55.03%), Query Frame = 0
Query:   39 WDATRFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRL-NVPELQTVCSMLRDHFGPSVIDP---LRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWIPPPEEIHL 223
            + +++ + LLK+A +RI++ R K+D +V+  R  IA  L + +EP ARI+ E ++RE + + A+D++E F +L+  +  V+  Q+     P DLKE++AS++FA++R  ++PEL  + S     +G   +     LR   G + + I K     +    P G   L  L  IATE+ + W P   E  L
Sbjct:    6 FKSSKCKTLLKLATSRIKLLRNKRDIQVKQMRRDIAQMLGTGQEPSARIRVEHVIREQNIMDAYDMVELFAELIVVRLPVIDGQKT---CPADLKESIASLIFAAARCADLPELADIKSCFALKYGKEFVAAAAELRPTCGVSRRIIEK-----MSVRAPSGETKLKVLKEIATEYGVVWDPRDTEAEL 186          
BLAST of Gvermi12912.t1 vs. uniprot
Match: A0A446PVY1_TRITD (Uncharacterized protein n=4 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446PVY1_TRITD)

HSP 1 Score: 85.9 bits (211), Expect = 5.440e-16
Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 0
Query:   43 RFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLN-VPELQTV----CSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWIP 216
            + ++ LKMA  RI++ R KK+ +V+  R  +A  L  +++  ARI+ E ++RE   + A+D+IE + +L+  + +++  Q+     P DLKE +ASV+FAS R + V EL  V     S     F  S ++ +R  SG N   I K     L  G PD       LSSIA EH I W P
Sbjct:   20 KCKIALKMAMARIKLLRNKKEVQVRQMRREVAQLLDGNQDQTARIRVEHVIREEKFMQAYDLIEVYCELIVARMSIIDSQKT---CPIDLKEAIASVIFASMRCSDVTELADVRKNFTSKYGKEFATSALE-VRPDSGVNHLVIEK-----LSAGAPDVQTKTKTLSSIAAEHNIKWEP 189          
BLAST of Gvermi12912.t1 vs. uniprot
Match: UPI00126354A0 (IST1-like protein n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI00126354A0)

HSP 1 Score: 89.4 bits (220), Expect = 6.360e-16
Identity = 69/224 (30.80%), Postives = 109/224 (48.66%), Query Frame = 0
Query:   39 WDATRFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLN-VPELQTVCSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWI----------PPPEEIHLDQGIASRASDPGYYRPERLPQATNIPGM 251
            + +++ +   KMA  RI++ R K+   V+  R  IA  L S ++  ARI+ E ++RE + + A + IE F +L+ ++  ++  QR     P DLKE +ASV+FAS R + +PEL  + ++    +G   +     L  PN   +N+ L   L   TP G   L  +  IA E+QI+W           PP E I       S  S P  ++P   P   N P +
Sbjct:   23 FSSSKCKTAAKMAVARIKLLRNKRQAVVKQMRRDIALLLESKQDATARIRVEHVIREQNVLAANEFIELFCELIVSRLTIIAKQRE---CPVDLKEGIASVIFASPRCSEIPELAAMRNIFEKKYGKDFVSAATDLR-PN-SGVNRMLIEKLSVRTPPGEVKLKVMKEIAKEYQIDWDTTESEVELLKPPEERIEGPDVFVSTTSLPLKHKPPIQPVEPNKPAI 241          
BLAST of Gvermi12912.t1 vs. uniprot
Match: UPI001CF9EBDD (IST1 homolog n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF9EBDD)

HSP 1 Score: 89.0 bits (219), Expect = 8.290e-16
Identity = 65/206 (31.55%), Postives = 103/206 (50.00%), Query Frame = 0
Query:   39 WDATRFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLN-VPELQTVCSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINWIPPPEEIHLDQGIASRASDPGYYRPERLP 243
            + ++  +   KMA  RI++ R K++  V+  R  IA  L+S ++  ARI+ E ++RE + + A + IE F +L+  +  ++  QR     P DLKE +ASV+FAS R + +PEL  +  +    +G   +     L  PN   +N+ L   L   TP G   L  +  IA E+QI W     E+ L +    R     + RP  LP
Sbjct:   23 FSSSECKTAAKMAVARIKLLRNKREALVKQMRRDIALLLQSKQDATARIRVEHVIREQNVLAANEFIELFCELIVARLTIIAKQRE---CPADLKEGIASVIFASPRCSEIPELVAMRKIFEKKYGKDFVSAATDLR-PN-SGVNRMLIEKLSVRTPPGEVKLKVMKEIAKEYQIGWDTAESEMELLKPPEERIVPDVFVRPTSLP 223          
BLAST of Gvermi12912.t1 vs. uniprot
Match: A0A2P5EAW9_TREOI (Vacuolar protein sorting-associated protein n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5EAW9_TREOI)

HSP 1 Score: 89.0 bits (219), Expect = 8.950e-16
Identity = 64/193 (33.16%), Postives = 103/193 (53.37%), Query Frame = 0
Query:   39 WDATRFRVLLKMANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQITAFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLN-VPELQTVCSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVLDELSSIATEHQINW---------IPPPEEI 221
            ++A++ +   KMA  RI++ R K+   V+  R  IA  L+S ++  ARI+ E ++RE + + A + IE F +LL T+ +++  +R     P DLKE +AS++FAS R + +PEL  +  +    +G   +     L  PN   +N+TL   L   TP G   L  +  IA E+QI W         + PPEE+
Sbjct:   26 FNASKCKTAAKMAVARIKLLRNKRQVVVKQMRRDIALLLQSGQDATARIRVEHVIREQNVLAANEFIELFCELLVTRLSIISKRRE---CPADLKEGIASLIFASPRCSEIPELVAIRDVFEKKYGKDFVSAATDLR-PNCG-VNRTLIDKLSVRTPTGEFKLKIMKEIAKEYQIEWDTKETEMELLKPPEEL 213          
The following BLAST results are available for this feature:
BLAST of Gvermi12912.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1I4_9FLOR9.590e-16167.79IST1-like protein n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A834GGJ9_RHOSS1.120e-1631.58Uncharacterized protein n=2 Tax=Rhododendron TaxID... [more]
D8RE34_SELML1.980e-1633.33Uncharacterized protein (Fragment) n=2 Tax=Selagin... [more]
A0A443NHY7_9MAGN3.120e-1631.75Filaggrin isoform X2 n=1 Tax=Cinnamomum micranthum... [more]
A0A6J1KQI2_CUCMA3.460e-1632.12IST1-like protein n=3 Tax=Cucurbita TaxID=3660 Rep... [more]
UPI000D1CFD6E5.330e-1632.28IST1 homolog n=2 Tax=Selaginella moellendorffii Ta... [more]
A0A446PVY1_TRITD5.440e-1635.75Uncharacterized protein n=4 Tax=Triticum turgidum ... [more]
UPI00126354A06.360e-1630.80IST1-like protein n=1 Tax=Pistacia vera TaxID=5551... [more]
UPI001CF9EBDD8.290e-1631.55IST1 homolog n=1 Tax=Mangifera indica TaxID=29780 ... [more]
A0A2P5EAW9_TREOI8.950e-1633.16Vacuolar protein sorting-associated protein n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 46..213
e-value: 6.9E-27
score: 94.4
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161IST1 FAMILY MEMBERcoord: 41..225
IPR042277Vacuolar protein sorting-associated protein IST1-likeGENE3D1.20.1260.60coord: 36..222
e-value: 1.1E-35
score: 124.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..295
NoneNo IPR availablePANTHERPTHR12161:SF5IST1 HOMOLOGcoord: 41..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2069440..2070549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12912.t1Gvermi12912.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2069440..2070549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12912.t1 ID=Gvermi12912.t1|Name=Gvermi12912.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=370bp
MKAMKGALARKFARANEQPAAPGPLSAPVAPATNASPVWDATRFRVLLKM
ANNRIEIQRGKKDNEVQATRIVIADHLRSHREPLARIQAERILRELSQIT
AFDVIETFIQLLQTQHNVLVVQRNFDAAPQDLKENVASVVFASSRLNVPE
LQTVCSMLRDHFGPSVIDPLRTLSGPNIKYINKTLAISLEGGTPDGYRVL
DELSSIATEHQINWIPPPEEIHLDQGIASRASDPGYYRPERLPQATNIPG
MSMPPAPSAPPSNIPGYTPYDNSPYGGAPSAPPPGFPPSAPPFDPSAGAP
GTLYPYPDHNAPGQPPSYIPPPPPFSHTSSSRDDRGPGDGGPSLPTPPSN
APFLNDDSLEARFRDLKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
IPR042277IST1-like