Gvermi12804.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
|
Overview
Homology
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A2V3II35_9FLOR (Putative pre-16S rRNA nuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II35_9FLOR) HSP 1 Score: 236 bits (602), Expect = 1.310e-75 Identity = 123/198 (62.12%), Postives = 154/198 (77.78%), Query Frame = 0
Query: 25 RSKRKIVARIGERTLGVDYGVRRVGLAISVGVAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLIRCAPWAKILVLNETFTSKDAKEQLRDSGIVGRIVEDFIDSESAVMLLQRHYSDMDDYKAELVHVPKVVSVEQRRI-EERMTYAEWKKLAMQRAAQHVQSGKKKKKK 221
RS+ +VARIGERTLGVDYG+RRVGLA+SVGVAPRPLQR++H +P + A DVAR+A+ NLA+AIVVGMP + G E QA TR F+++L+ APWAKI LNETFTS DA+ QL D GI G+ V+ +IDS SAVMLLQR++SD DDYKAE++H P+ E+RR ER+T+AEW+K M RAAQ Q+GK+ KKK
Sbjct: 22 RSRVNLVARIGERTLGVDYGLRRVGLAVSVGVAPRPLQRVEHRNDPRRAALDVARVANSNLADAIVVGMPFLLVGAEGEQALATRRFIEELVSSAPWAKIFTLNETFTSMDARTQLYDMGITGKDVKTYIDSTSAVMLLQRYFSDNDDYKAEVIHTPQPAGEEERRSGNERITFAEWRKQIMDRAAQGSQTGKQPKKK 219
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A7S1HCJ2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HCJ2_HEMAN) HSP 1 Score: 109 bits (272), Expect = 1.710e-26 Identity = 57/137 (41.61%), Postives = 88/137 (64.23%), Query Frame = 0
Query: 32 ARIGERTLGVDYGVRRVGLAISVGVAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLIRCAPWAKILVLNETFTSKDAKEQLRDSGIVGRIVEDFIDSESAVMLLQRHYS 168
+++G +T+GVDYG+RR G+ +SVG APRPL I+H +P VA +VA A LAE IVVG+P++ G E QA+ TR V L AP I + +E F+S A+E+L ++G R ++ +D+ ++V +LQ ++
Sbjct: 1 SQMGRKTIGVDYGLRRTGVCVSVGYAPRPLPLIEHNRDPAFVAKEVAEHARRELAEQIVVGLPLNSRGGEGEQANATRVMVAALTEAAPGCNIYLWDERFSSAVAREKLEEAGYSSRSMKGLVDTVASVGILQDFFA 137
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A7S2ZDD4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDD4_9RHOD) HSP 1 Score: 107 bits (266), Expect = 5.130e-25 Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 0
Query: 20 CIGNQRSKRKIVARIGERTLGVDYGVRRVGLAISVGVAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLIRCAPWAKILVLNETFTSKDAKEQLRDSGIVGRIVEDFIDSESAVMLLQRHYSDMDDYKAELVH 179
CIG K +G++TL VDYG+RRVGLA+SVG+APR L +I + GN +VA ++ +A + +VVG+P++ G E QA TR F + L P I + +E F+++ A+ +L S VE+F+DSE+AV +L+ + + D AEL++
Sbjct: 10 CIGGSDGK----VHLGKKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRIALPEPPIYLWDERFSTQTARNRLMSSKTYRNQVENFVDSEAAVAILEDFFENSGD-DAELLY 164
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A7S3E813_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E813_9RHOD) HSP 1 Score: 89.4 bits (220), Expect = 8.560e-19 Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 0
Query: 20 CIGNQRSKRKIVARIGERTLGVDYGVRRVGLAISVGVAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLIRCAPWAKILVLNETFTSKDAKEQLRDSG 144
CIG K +G++TL VDYG+RRVGLA+SVG+APR L +I + GN +VA ++ +A + +VVG+P++ G E QA TR F + L P I + +E F+++ A+ +L S
Sbjct: 10 CIGGSDGK----VHLGKKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLRIALPEPPIYLWDERFSTQTARNRLMSSS 130
BLAST of Gvermi12804.t1 vs. uniprot
Match: M2X2I9_GALSU (DNA binding / hydrolase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2I9_GALSU) HSP 1 Score: 88.2 bits (217), Expect = 1.360e-17 Identity = 59/161 (36.65%), Postives = 88/161 (54.66%), Query Frame = 0
Query: 35 GERTLGVDYGVRRVGLAISVGVAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTR--NFVQQLIRCAPWAKILVLNETFTSKDAKEQLRDSGIVGRIVEDFIDSESAVMLLQRHYSDMDDYKAELVHVPKVVSVEQRRIEE 193
G + +GVDYG+ RVG+A+SVG +PRPL I H N V ++ I S AE IVVG+P+ E S T + NF Q + ++ + +E +TS A E+L + GI ++ IDSE+AV+LL+R + K+ L K+V + IE+
Sbjct: 61 GRKAVGVDYGMSRVGVAVSVGFSPRPLTCIKHENNTDLVLEKLSEIVSSERAEIIVVGLPLSARV-ECSSGQTQKAMNFAQLVANRFSKQEVYLCDEKYTSIVANERLAERGISLVNSKELIDSEAAVVLLERFFGGWSSDKSGLYL--KLVKPQHENIEQ 218
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A1X6P5R6_PORUM (YqgFc domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5R6_PORUM) HSP 1 Score: 87.4 bits (215), Expect = 1.450e-17 Identity = 52/125 (41.60%), Postives = 68/125 (54.40%), Query Frame = 0
Query: 11 PAGLGPHIPCIGNQRSKRKIVARIGERTLGVDYGVRRVGLAISVGVAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLIRCAPWAKILVLNETFTSKD 135
P G G H P R G R LGVDYG+RR GLA VG A RPL R+ H +P A VA A+ IVVG+P++ GRE Q TR FV +L+ APWA + + +E ++S++
Sbjct: 38 PRGRGQHSPXXXXSRRF------FGTRALGVDYGLRRTGLASGVGYASRPLPRLTHGRSPDGAAEAVATAAAG--VRLIVVGLPLNGAGREGDQCVATRRFVARLVARAPWAAVWLYDERWSSQE 154
BLAST of Gvermi12804.t1 vs. uniprot
Match: M1VIN2_CYAM1 (YqgFc domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VIN2_CYAM1) HSP 1 Score: 81.3 bits (199), Expect = 3.280e-15 Identity = 55/163 (33.74%), Postives = 87/163 (53.37%), Query Frame = 0
Query: 31 VARIGERTLGVDYGVRRVGLAISVGVAPRPL--------------QRIDHFGN-----------PFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLIRCAPWAKILVLNETFTSKDAKEQLRDSGIVGRI-VEDFIDSESAVMLLQRHY 167
+A+IG R+LG+DYG RRVG+A+SVG APRPL ++ GN P ++ DV +A + IVVG+P+ G E Q+ TR F ++L + A + + +E F++++A+ L + I R +E ID+ESA ++L+ Y
Sbjct: 27 IAQIGRRSLGIDYGFRRVGVAVSVGFAPRPLGCLPNAHRVATGPQNKVKIEGNRNRGQGRKSTVPDRLIEDVLDLALQEAVDQIVVGLPLHSDGLESDQSRETRVFAEKLAK-ATVLPVYLWDECFSTQEARAVLEANAIRSRRRIERQIDAESACVILREFY 188
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A7S4D691_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D691_HETAK) HSP 1 Score: 82.0 bits (201), Expect = 4.040e-15 Identity = 54/145 (37.24%), Postives = 85/145 (58.62%), Query Frame = 0
Query: 36 ERTLGVDYGVRRVGLAISVG-VAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLI-RCAPWAKILVLNETFTSKDAKEQLRDSGIVGRIVEDFIDSESAVMLLQRHYSDMDDYKAELV 178
ER LGVDYG +RVG+AIS G +APRP++ I + G+ +V ++ +A + VVG+P+ G E +Q+ RNF Q L +P + V NE F+S A+ L G I + +D+ +A M+L+ ++S+ D + AEL+
Sbjct: 73 ERVLGVDYGTKRVGIAISAGGIAPRPVKIIQNSGDDSQVIREIKFMARAEQISSFVVGVPLQRDGAETNQSIINRNFSQTLADEVSPRVPVYVWNEAFSSVAAESLLLHKSR-GEI-DACLDAVAACMILEDYFSE-DGWGAELI 214
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU) HSP 1 Score: 79.3 bits (194), Expect = 1.570e-14 Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 0
Query: 35 GERTLGVDYGVRRVGLAISVGVAPRPLQRID-HFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQQLIRCAPWAKILVLNETFTSKDAKEQLRDSGIVGRIVEDFIDSESAVMLLQRHYSDMDDYKAELVHVP 181
G RTLGVD+G+RR GLA+S G+AP P+ ID N VA V R A A +V+GMP + G E QA TR F + L R A + + +E F+S +A +R + G ID +A ++L+ + D AEL+ P
Sbjct: 60 GTRTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAAPRPVYLWDERFSSAEAS--MRANAGDGAARGQSIDDVAAAIILEEFFEG-DFASAELIAPP 204
BLAST of Gvermi12804.t1 vs. uniprot
Match: A0A7S2WGV2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGV2_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.670e-14 Identity = 50/146 (34.25%), Postives = 83/146 (56.85%), Query Frame = 0
Query: 39 LGVDYGVRRVGLAISVGVAPRPLQRIDHFGNPFKVANDVARIASCNLAEAIVVGMPVDIYGRELSQAHTTRNFVQ----QLIRCAPWAKILVLNETFTSKDAKEQLR--DSGIVGRIVEDFIDSESAVMLLQRHYSDMDDYKAELV 178
LGVDYG RR+GLA+S G +PRP+ I H GN ++ + + IA AE +VVG P++ G E Q+ TRNF Q ++ R + + + +E ++S +A+ L+ GR++ +D+ESA +L+ +++ D E +
Sbjct: 60 LGVDYGTRRIGLAMSAGFSPRPVLTIKHTGNTTEMVHKILNIAKGEDAELLVVGNPLNQDGEENFQSDLTRNFTQVLASEVARRSLKLGVYMKDERYSSAEAEANLQFVSKKSKGRMLA-VLDAESACSILRAFFNEPVDSSVERI 204 The following BLAST results are available for this feature:
BLAST of Gvermi12804.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12804.t1 ID=Gvermi12804.t1|Name=Gvermi12804.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=222bpback to top |