Gvermi12888.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A2V3J2F3_9FLOR (Cochlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2F3_9FLOR) HSP 1 Score: 512 bits (1319), Expect = 2.130e-179 Identity = 278/337 (82.49%), Postives = 293/337 (86.94%), Query Frame = 0
Query: 77 PAFDLTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHP-APHLPRPS-WP----APSQSP--EPATPPADTPSPL-SFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQGGMNFTLRRLGSTK 404
P FDLTALPDELISMCYA LPATDLVALEHVSRRLRHLIAYD+VCWRRCT ARWGHLTTNSVLLPSAARHAGTWK+LYSEKA CDAKN PWLTLC SE LAILDLIK+HP APHLP S W A SP EPATPP D PSPL SFSSP SVM A P+ H CINIVLLIDASSSVTDDDFDAMK+FAR LV SLR THP S VA+VQFNQHPKVEISLTPVS KL+TAIDNMEQLMGSTDIAAPIRRAREIL+ EA PGDRAIVLLTDGQTHADEL +SEKEAR+A+++V ARMFTLGVGRDVDE GL RVA+GS+GGMNFTLRRLGSTK
Sbjct: 27 PTFDLTALPDELISMCYADLPATDLVALEHVSRRLRHLIAYDSVCWRRCTDARWGHLTTNSVLLPSAARHAGTWKNLYSEKAICDAKNNPWLTLCQSEMLAILDLIKQHPVAPHLPTTSHWSTTTNATHHSPPSEPATPPPDKPSPLFSFSSPASVM-AHPAPMHHQCINIVLLIDASSSVTDDDFDAMKNFARALVASLRHTHPKSAVALVQFNQHPKVEISLTPVSKAKLTTAIDNMEQLMGSTDIAAPIRRAREILSVEALPGDRAIVLLTDGQTHADELHESEKEARRAYEEVGARMFTLGVGRDVDELGLGRVASGSEGGMNFTLRRLGSTK 362
BLAST of Gvermi12888.t1 vs. uniprot
Match: R7QFU2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFU2_CHOCR) HSP 1 Score: 415 bits (1067), Expect = 1.630e-139 Identity = 218/328 (66.46%), Postives = 267/328 (81.40%), Query Frame = 0
Query: 81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHPAPHLPRPS-WPAPSQSP--EPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEE-ASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQGGMNFTLRRLGSTK 404
LT+LPDELI+MCY+ L A DLVALEHVSRRLR LIAYD+VCW+RCT+ RWGHL+ NS +LPSAARHAGTWK LYSEKA+ DA + PWLTLC SE LA+LD+IK +P P WP + P++PP D+ P+S SSP+SVM PS+P + C+++VLLIDASSSVTDDDF+ MKSF+ LV LR +HP + V+VVQFNQHPKVE++LT V +LS++I+NMEQ+MGSTDIAAPIRRAR+IL+E+ PGDRAIVLLTDGQTHADEL +SE+E+RKAF++V ARM+TLGVGRD+DE GL RVAAGS+GG+ TLRRL S+K
Sbjct: 149 LTSLPDELIAMCYSDLSAADLVALEHVSRRLRQLIAYDSVCWKRCTETRWGHLSANSAILPSAARHAGTWKRLYSEKAKTDADHTPWLTLCGSETLAVLDIIKGATT-QVPMPVYWPMSTDMDIAVPSSPPKDSVVPMSTSSPVSVM---PSNPAVSCLSVVLLIDASSSVTDDDFETMKSFSLALVEDLRVSHPEACVSVVQFNQHPKVEVALTNVCKSRLSSSIENMEQMMGSTDIAAPIRRARKILSEDDVRPGDRAIVLLTDGQTHADELQESERESRKAFEEVGARMYTLGVGRDIDEVGLGRVAAGSEGGVYVTLRRLVSSK 472
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A6T6CNV7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CNV7_9RHOD) HSP 1 Score: 266 bits (679), Expect = 6.690e-83 Identity = 158/331 (47.73%), Postives = 207/331 (62.54%), Query Frame = 0
Query: 81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHPAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPG-DRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQ----------GGMNFTLRRL 400
L LPDELI C +L A DLV LE VSRRLR +++ D WR +RW + + +L AA AG WK LYSEK + + APWL C SE AI++LIK PP T SP+S ++ A +S + +++V+L+D SSSVT+DDF AM+ F +TL+ SLR T+P S A+VQFNQ+P+VE L+P+++ + A+D MEQ+MGSTDIAAPIR ARE+L +PG D+ I+LLTDGQTH +EL +E+EAR A ++ AR+FT GVGRDVDE+GL RVAAGS+ GG FTLRRL
Sbjct: 29 LLLLPDELIGCCLQNLEAEDLVRLELVSRRLRSVVSSDYSRWRELCMSRWK--SNSPQVLELAAEFAGGWKRLYSEKHVSEKETAPWLVPCISEVSAIVELIKGE--------------------GPPTPTGSPVSI-----LLDAMGTSHFTNVLSVVILVDGSSSVTEDDFSAMRQFGKTLMGSLRSTYPGSHAALVQFNQYPRVESPLSPIASGESIAALDKMEQIMGSTDIAAPIRLARELLTSSNAPGGDKVILLLTDGQTHNEELAMTEREARGAAEECGARVFTFGVGRDVDEAGLERVAAGSRRFVEGKRKNFGGCYFTLRRL 332
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A1X6NMF6_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMF6_PORUM) HSP 1 Score: 227 bits (578), Expect = 4.700e-67 Identity = 159/353 (45.04%), Postives = 211/353 (59.77%), Query Frame = 0
Query: 65 PAAPALAKRAPTPAFDLTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRH--PAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEI-SLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEE----ASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGS-----------QGGMNFTLRR 399
PA A+ + APT A +L ALPDEL+S C L LVALE RRLR L++ D + WR+ + +WG NS +L +AA AG WK L++EK + + +++ SE AIL +IK PHL R S PS SP A P PSP +SP+ V P + ++IV +D SSSVT++DF AMK F R+LV SLR++HP + ++++QFNQ K E+ +LTPV P A+ +M+QLMGSTDI P+ A ILA + GD+ I+LL+DGQTH +EL +SE + RKA + AR + LGVGRDVDE GL RVAAG+ Q G FTLRR
Sbjct: 43 PATTAM-ETAPTEA-ELLALPDELLSCCCEGLEVKSLVALELTCRRLRELVSSDTMRWRQAVKDKWGK-AYNSDILDAAAVIAGGWKQLFAEKYDPERRQTTFVSPVKSEVAAILSVIKGTGPTVPHLKRVSN-FPSSSPRAA--PTTPPSPPYGTSPVCVTIPMPDN-EPSPLSIVCCVDGSSSVTEEDFWAMKDFLRSLVSSLRESHPEAQLSLLQFNQTVKRELPALTPVG-PAAMVAVQSMKQLMGSTDIEKPLATAGSILAAADDGGSGSGDKVILLLSDGQTHMEELAKSEAQVRKAAETCGARFYALGVGRDVDEDGLRRVAAGTLLPARSHLKPVQQGAYFTLRR 387
BLAST of Gvermi12888.t1 vs. uniprot
Match: M2Y1C3_GALSU (Collagen-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1C3_GALSU) HSP 1 Score: 223 bits (569), Expect = 1.440e-64 Identity = 141/332 (42.47%), Postives = 196/332 (59.04%), Query Frame = 0
Query: 84 LPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKR------HPAPHLPRPSWPAPSQSPEPATPPADTPSPLSF--SSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRV-------AAGSQGGMNFTLRRL 400
LPDE+IS HL A DL++LE VS+R R ++ ++ WR Q RW + N+ +L +A+ AG WK LY EK + + APW+ SE A+L++IK H +P + S + D + + SP S +S + P + I +LID SSSVT++DF AMK F R L+ SLR THP+S ++QFNQ+P+VE+ L VS P + ++ +EQ+MGSTDIAAPIRRA +IL + I+L+TDGQTHA+E S EARKAFD++ A + GVGRDVDE GL R+ ++ S+GG FTLR+L
Sbjct: 169 LPDEIISSLLGHLDAKDLISLEFVSKRFRDIVRSESGQWRSIVQRRWSS-SANAEILETASLLAGGWKRLYMEKHLSEIRRAPWIVPSKSELEAMLEIIKSDCSLFPHGSPVGVYQTNDMHIFSNQACVANHDKLATTIYMDDSPTSAISDSSFPP----LCIAILIDGSSSVTEEDFIAMKEFCRALLASLRLTHPSSQACIIQFNQYPRVEVGLADVSKPGIMDTVERLEQMMGSTDIAAPIRRAHQILTTAHHNSHKVIILMTDGQTHAEEFELSILEARKAFDELNAAFYAFGVGRDVDEQGLQRIVYASRRSSSYSKGGY-FTLRKL 494
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A7S0G5T3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5T3_9RHOD) HSP 1 Score: 214 bits (544), Expect = 1.060e-62 Identity = 134/339 (39.53%), Postives = 196/339 (57.82%), Query Frame = 0
Query: 80 DLTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHPAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSA-APSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEAS-PGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQ----------------GGMNFTLRRL 400
++ LP+E+I++C A L A DL+ +E ++ RLR L+ + W+ +ARWG NS LL +++ AG WK+LY++K + KN PW+ E AIL+L++ + SP+S S SVMS AP+ + +VLL+D SSSVT +DFDAMKSF R L+ +LR+ P+S + ++QFNQ P+ I + +S + +D M+QLMGSTDIAAPI+ A E+L E+ + GD ++LL+DGQT EL S++EAR A + + R+F GVGRDVDE GL+R+AA ++ GG TLRR+
Sbjct: 13 EMDMLPNEIINICLAELTARDLLHMEMINHRLRELVLKNNNLWKDKVKARWGMQANNS-LLEASSDLAGGWKNLYAQKHVSEKKNKPWIVPSAPEIEAILELVRGDSSRDR--------------------VGSPMSLSPTSSVMSEMAPARGLKRGLTVVLLLDGSSSVTREDFDAMKSFTRKLIDNLRERRPDSALGLIQFNQSPRTIIPICHISED-IPERVDKMQQLMGSTDIAAPIKTAHELLTEDGNFGGDAVVLLLSDGQTSTSELEASQREARSAAELMGVRLFAFGVGRDVDEMGLNRIAASTRIECEQLLDGTIIPERPGGAYLTLRRM 329
BLAST of Gvermi12888.t1 vs. uniprot
Match: UPI001E1D8EE0 (cochlin-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8EE0) HSP 1 Score: 186 bits (471), Expect = 9.670e-54 Identity = 97/161 (60.25%), Postives = 125/161 (77.64%), Query Frame = 0
Query: 236 INIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEE-ASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQGGMNF 395
+++VLL+D SSSVT+DDF AMK F LV SLR +H +S+VAV+QFNQ+PKV LT V L I +M+Q+MGSTDIAAPIRRAR+ILAE+ G++AIV+LTDGQTH+DEL ++E+EAR+A AR+F LGVGRDVDESGLSRVA+G+ ++
Sbjct: 9 LHVVLLVDGSSSVTEDDFYAMKQFCLELVASLRHSHTSSSVAVLQFNQYPKVHTGLTSVEKQSLIATIQSMDQMMGSTDIAAPIRRARQILAEDDTGVGEKAIVILTDGQTHSDELKEAEREARQAAIDSGARLFALGVGRDVDESGLSRVASGTSSALSI 169
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A5J4ZAK9_PORPP (Collagen alpha-6(VI) chain n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAK9_PORPP) HSP 1 Score: 186 bits (472), Expect = 2.470e-51 Identity = 124/331 (37.46%), Postives = 180/331 (54.38%), Query Frame = 0
Query: 81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRH----PAPHLPRPSWPAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDCINIVLLIDASSSVTDDDFDAMKSFARTLVHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAAGSQ--------GGMNFTLRR 399
L LP E++S C L A D+ LE V + LR + +D++ WR ++ + VL +AA +AG W+ LY K APW + E AI D+I + P HL + S+SP T D V + A + H + ++ L+D SSSVT++DF MK+F L+ S+R +HP S V ++QFNQ P+VE+ P+ ++ + ++Q+MGSTDI+AP+R+ E+ EEA D +VLLTDGQT A+EL Q+E+ + RMFT+GVGRDVDESGL R+AA ++ GG F LR+
Sbjct: 78 LDGLPSEVLSQCLKGLSAQDMATLERVDKHLRDAVQHDSLRWRDVVLRQFSYNEPCDVL-DAAAHYAGGWRSLYVAKVTDAKTKAPWYSPTDFEVRAICDVITQQNLKAPHHHLGKSVDYGLSRSP---TNIMD-----------DVYAGANAVKH--DMAVLFLLDGSSSVTEEDFKTMKAFCLKLIESVRLSHPKSVVGLIQFNQFPRVEMGFRPIGDAHVTQTVQALDQMMGSTDISAPVRQGHEMF-EEAWATDNVMVLLTDGQTQAEELRQTERYGEQGAISHGIRMFTMGVGRDVDESGLMRIAAAARKSMPRESVGGSYFALRK 390
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A7S0ZFC0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFC0_9RHOD) HSP 1 Score: 117 bits (293), Expect = 6.020e-28 Identity = 59/124 (47.58%), Postives = 87/124 (70.16%), Query Frame = 0
Query: 264 VHSLRQTHPNSTVAVVQFNQHPKVEISLTPVSTPKLSTAIDNMEQLMGSTDIAAPIRRAREILAEEASPGDRAIVLLTDGQTHADELCQSEKEARKAFDQVRARMFTLGVGRDVDESGLSRVAA 387
V SL N+ V+QFNQ P+VE++L+ +++ K+ +D +EQ+MGSTDIAAP++RA ++LAE D+ ++LLTDGQTH++E+ Q++ +A + RMF LGVGRDVDE GL RV +
Sbjct: 6 VCSLNLCERNAAFGVIQFNQIPRVELALSDITSEKVLETVDKLEQMMGSTDIAAPVKRAVQLLAE-VQAHDKVMILLTDGQTHSEEIRQTQIQAVRGATDYGLRMFALGVGRDVDEVGLGRVVS 128
BLAST of Gvermi12888.t1 vs. uniprot
Match: A0A7S0ZFA3_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFA3_9RHOD) HSP 1 Score: 102 bits (255), Expect = 1.650e-21 Identity = 73/196 (37.24%), Postives = 106/196 (54.08%), Query Frame = 0
Query: 81 LTALPDELISMCYAHLPATDLVALEHVSRRLRHLIAYDAVCWRRCTQARWGHLTTNSVLLPSAARHAGTWKHLYSEKAQCDAKNAPWLTLCHSEKLAILDLIKRHP--APHLPRPSW----PAPSQSPEPATPPADTPSPLSFSSPISVMSAAPSSPHLDC---INIVLLIDASSSVTDDDFDAMKSFARTLVHSL 267
L+ LPDELIS C + L A+D+ LE V++R+R+++ D+ WR RWG+ + +L S+ AG+WK L+SEK D N PW C SE A+LD I+ P + R P ++ A P + +P + S + S S + I +++LID SSSVT+DDF AM+ FAR+ V SL
Sbjct: 56 LSKLPDELISCCLSGLSASDMACLESVNQRMRYVVQNDSARWREVVLERWGNELSRDILDASSTL-AGSWKRLFSEKMMVDKANLPWRIPCSSEMDALLDAIQNRPQKTTQMERNGMKVLKPQTMKNNSGAYPFSQSPVSIMQDSNMMNDSVEESDSNTGKEYEIAVMVLIDGSSSVTEDDFRAMRRFARSTVCSL 250 The following BLAST results are available for this feature:
BLAST of Gvermi12888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12888.t1 ID=Gvermi12888.t1|Name=Gvermi12888.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=405bpback to top |